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PI0012038 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012038
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationchr06:29030694..29031580
RNA-Seq ExpressionPI0012038
SyntenyPI0012038
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596882.1 hypothetical protein SDJN03_10062, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1056.95Show/hide
Query:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSP
        MA+ARAMLVL L   +LSSS+IAQ PS    PA+ AAP PSTP PVA P  + PPAASPP  IS+PP A         ASPP M  SP   PMPDSPPS 
Subjt:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSP

Query:  PAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVL
        P  SPGP S                SAGFSIH GGYKA +AAVLGG+A VL
Subjt:  PAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVL

XP_022923372.1 classical arabinogalactan protein 9-like [Cucurbita moschata]5.4e-3273.91Show/hide
Query:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPP------AASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGP--
        MA+ARAMLVL LSLLSL++S+IAQSPSP+PGPA  AAPPP TPPPVA PPTTPPP      AASPPPS+STPP A PP  PP MASPP ME  P+PGP  
Subjt:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPP------AASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGP--

Query:  MPDSPPSPPAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAA-VAAVLGGLAVVLV
        MPDSPPSPP  SPGP   PAPA AP+PP  PPP AGFSI  GGYKAA VAAVLGGLA+VLV
Subjt:  MPDSPPSPPAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAA-VAAVLGGLAVVLV

XP_023553563.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]2.1e-3174.07Show/hide
Query:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPP------AASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGP--
        MA+ARAMLVL LSLLSL++S+IAQSPSP+PGPA  AAPPP TPPPVA PPTTPPP      AASPPPS+STPP A PP   P MASPP ME  P+PGP  
Subjt:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPP------AASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGP--

Query:  MPDSPPSPPAQSPGPTSPPAPAPAPT-PPSPPPPSAGFSIHQGGYKAA-VAAVLGGLAVVLV
        MPDSPPSPP  SPGP+S P+PA AP+ PPSPPPP AGFSI  GGYKAA VAAVLGGLA+VLV
Subjt:  MPDSPPSPPAQSPGPTSPPAPAPAPT-PPSPPPPSAGFSIHQGGYKAA-VAAVLGGLAVVLV

XP_038903480.1 classical arabinogalactan protein 9-like [Benincasa hispida]6.8e-4384.42Show/hide
Query:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSP
        MASARAMLVL LSLL+L SSSIAQSPSP+PGPAS AAPPPS+PPPVA PPTTPPPAASPPP+ISTPPAA PPA PP MASPP ME SP PGPMPDSPPSP
Subjt:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSP

Query:  PAQSPGP--TSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV
        P  SP P   SPP PAPAP+PPSPPPPSAGFSIHQGGYKAA AAVLGGLAV LV
Subjt:  PAQSPGP--TSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV

YP_293946.1 hypothetical protein EhV192 [Emiliania huxleyi virus 86]3.3e-0546.32Show/hide
Query:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----
        SP PSP P SP   PP +PPP +PPP +PPP + PPPS   S PP + PP +PP  + PPP    P+P P    PPSPP  SP P  PPAP+P P+    
Subjt:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----

Query:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV
          PPSPPPPS        G KA + ++ GG++ +++
Subjt:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV

TrEMBL top hitse value%identityAlignment
A0A0A0L458 Uncharacterized protein6.9e-4185.81Show/hide
Query:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQS--PAPGP-MPDSP
        MASARAMLVL+LSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPP SISTPPAA P ATPP MASPPPME S  PAPGP MP+ P
Subjt:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQS--PAPGP-MPDSP

Query:  PSPPAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV
        PSPP+QSP     PAPAPAPTPPS  P SAGFSIHQGGY A VAAVLGGLAVVLV
Subjt:  PSPPAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV

A0A6J1E5X6 classical arabinogalactan protein 9-like2.6e-3273.91Show/hide
Query:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPP------AASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGP--
        MA+ARAMLVL LSLLSL++S+IAQSPSP+PGPA  AAPPP TPPPVA PPTTPPP      AASPPPS+STPP A PP  PP MASPP ME  P+PGP  
Subjt:  MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPP------AASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGP--

Query:  MPDSPPSPPAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAA-VAAVLGGLAVVLV
        MPDSPPSPP  SPGP   PAPA AP+PP  PPP AGFSI  GGYKAA VAAVLGGLA+VLV
Subjt:  MPDSPPSPPAQSPGPTSPPAPAPAPTPPSPPPPSAGFSIHQGGYKAA-VAAVLGGLAVVLV

G4YB50 Uncharacterized protein1.6e-0546.32Show/hide
Query:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----
        SP PSP P SP   PP +PPP +PPP +PPP + PPPS   S PP + PP +PP  + PPP    P+P P    PPSPP  SP P  PPAP+P P+    
Subjt:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----

Query:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV
          PPSPPPPS        G KA + ++ GG++ +++
Subjt:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV

Q4A2U1 Putative membrane protein1.6e-0546.32Show/hide
Query:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----
        SP PSP P SP   PP +PPP +PPP +PPP + PPPS   S PP + PP +PP  + PPP    P+P P    PPSPP  SP P  PPAP+P P+    
Subjt:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----

Query:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV
          PPSPPPPS        G KA + ++ GG++ +++
Subjt:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV

V5LRN7 Putative membrane protein1.6e-0546.32Show/hide
Query:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----
        SP PSP P SP   PP +PPP +PPP +PPP + PPPS   S PP + PP +PP  + PPP    P+P P    PPSPP  SP P  PPAP+P P+    
Subjt:  SPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPS--ISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSPPAPAPAPT----

Query:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV
          PPSPPPPS        G KA + ++ GG++ +++
Subjt:  --PPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGCACGTGCCATGCTCGTGCTCGTCCTCTCTCTTCTTTCTCTCTCTTCCTCCTCCATTGCTCAATCTCCCTCCCCTTCTCCAGGTCCCGCCTCCCCCGCCGC
ACCTCCGCCGTCAACCCCACCGCCGGTAGCACCTCCCCCGACCACACCTCCCCCTGCAGCCTCACCGCCGCCTAGCATATCAACTCCACCGGCAGCAACTCCTCCCGCCA
CCCCACCGACGATGGCATCTCCGCCGCCAATGGAACAAAGCCCAGCCCCAGGCCCAATGCCCGACAGCCCACCATCGCCTCCAGCCCAAAGTCCAGGTCCAACGTCTCCA
CCGGCTCCGGCTCCAGCTCCAACGCCGCCGTCACCTCCGCCGCCGAGCGCGGGATTTTCCATCCATCAAGGTGGGTACAAGGCGGCTGTTGCGGCGGTGTTGGGTGGCCT
GGCCGTCGTATTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
TTCCTCCTTCTTCTGCTTCACTTTCTTCCCAGCTATGGCTTCTGCACGTGCCATGCTCGTGCTCGTCCTCTCTCTTCTTTCTCTCTCTTCCTCCTCCATTGCTCAATCTC
CCTCCCCTTCTCCAGGTCCCGCCTCCCCCGCCGCACCTCCGCCGTCAACCCCACCGCCGGTAGCACCTCCCCCGACCACACCTCCCCCTGCAGCCTCACCGCCGCCTAGC
ATATCAACTCCACCGGCAGCAACTCCTCCCGCCACCCCACCGACGATGGCATCTCCGCCGCCAATGGAACAAAGCCCAGCCCCAGGCCCAATGCCCGACAGCCCACCATC
GCCTCCAGCCCAAAGTCCAGGTCCAACGTCTCCACCGGCTCCGGCTCCAGCTCCAACGCCGCCGTCACCTCCGCCGCCGAGCGCGGGATTTTCCATCCATCAAGGTGGGT
ACAAGGCGGCTGTTGCGGCGGTGTTGGGTGGCCTGGCCGTCGTATTGGTTTAACACAGCATAGTACTTGAATTTGCTGTAGATTATTATGATTATTATGAGCTTCATACT
CATTTGTGTATTCTTTTTTTTTCTTTTTTAATTTCTTCACCATTTCCATCTCTTGAGAGCATCCTTGAGTGAGTGATATTTGTGGGATTTGTTAGCATTTTCATTTTTTT
TTTGCTAGTTGAATAAGAGAGACTTGTTTCTTGTTCATGGTTTCATAATAATTTACTCAATTATACATTTTATGCTAATAGACAACAGAAAAAAAAAAAAATCAAACAAT
CTTGGGTAAGACAAATTATTATTTGAAAAAGTTTATGGATAGGAAGATTTGAACCATAGACATTTTTGTTGTTAACTTATCATAAATGTCAATTGAATTGTTCTGGTTTT
GGTTGTC
Protein sequenceShow/hide protein sequence
MASARAMLVLVLSLLSLSSSSIAQSPSPSPGPASPAAPPPSTPPPVAPPPTTPPPAASPPPSISTPPAATPPATPPTMASPPPMEQSPAPGPMPDSPPSPPAQSPGPTSP
PAPAPAPTPPSPPPPSAGFSIHQGGYKAAVAAVLGGLAVVLV