; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012040 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012040
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit B-4
Genome locationchr02:836844..837254
RNA-Seq ExpressionPI0012040
SyntenyPI0012040
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050890.1 nuclear transcription factor Y subunit B-4 [Cucumis melo var. makuwa]2.0e-5782.52Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENHNNGDEFLELPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQRCH ENRRTLNGDDI WAF S GLDNYA++FAKYLLKYREVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN
        +KVDE+KCKITQ+L   +DDDK        ++G EIGETSSPN
Subjt:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN

KAE8653368.1 hypothetical protein Csa_006911 [Cucumis sativus]3.5e-4687.27Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENH+NGDEFLELPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQRC NENRRTLNGDDIYWAFGSLGLDNYA+  +K+LL +REVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDE-HKCK
        +KVDE HK K
Subjt:  MKVDE-HKCK

XP_004135780.1 nuclear transcription factor Y subunit B-4 [Cucumis sativus]1.3e-4877.37Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENH+NGDEFLELPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQRC NENRRTLNGDDIYWAFGSLGLDNYA+  +K+LL +REVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDE-HKCKITQQLFLLEDDDKVVNGREIGETSSPN
        +KVDE HK K               N  EIGETSSPN
Subjt:  MKVDE-HKCKITQQLFLLEDDDKVVNGREIGETSSPN

XP_008451142.1 PREDICTED: nuclear transcription factor Y subunit B-4 [Cucumis melo]1.3e-5681.82Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENHNNGDEFLELPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQRCH ENRRTLNGDDI WAF S GLDNYA++FAKYL KYREVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN
        +KVDE+KCKITQ+L   +DDDK        ++G EIGETSSPN
Subjt:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN

XP_008451143.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]1.2e-3874.34Show/hide
Query:  EFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHKC
        E L+LPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQ+CHNENRRTLNGDDIYWAFGSLGLDNYA+  +  LLK+RE ER+K  +   
Subjt:  EFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHKC

Query:  KITQQLFLLEDDD
                +ED D
Subjt:  KITQQLFLLEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0LW12 CBFD_NFYB_HMF domain-containing protein6.2e-4977.37Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENH+NGDEFLELPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQRC NENRRTLNGDDIYWAFGSLGLDNYA+  +K+LL +REVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDE-HKCKITQQLFLLEDDDKVVNGREIGETSSPN
        +KVDE HK K               N  EIGETSSPN
Subjt:  MKVDE-HKCKITQQLFLLEDDDKVVNGREIGETSSPN

A0A1S3BQ87 Beta-galactosidase5.8e-3974.34Show/hide
Query:  EFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHKC
        E L+LPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQ+CHNENRRTLNGDDIYWAFGSLGLDNYA+  +  LLK+RE ER+K  +   
Subjt:  EFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHKC

Query:  KITQQLFLLEDDD
                +ED D
Subjt:  KITQQLFLLEDDD

A0A1S3BRX1 nuclear transcription factor Y subunit B-46.1e-5781.82Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENHNNGDEFLELPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQRCH ENRRTLNGDDI WAF S GLDNYA++FAKYL KYREVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN
        +KVDE+KCKITQ+L   +DDDK        ++G EIGETSSPN
Subjt:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN

A0A5A7U6S7 Nuclear transcription factor Y subunit B-49.5e-5882.52Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENHNNGDEFLELPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQRCH ENRRTLNGDDI WAF S GLDNYA++FAKYLLKYREVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN
        +KVDE+KCKITQ+L   +DDDK        ++G EIGETSSPN
Subjt:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN

A0A5D3CG76 Nuclear transcription factor Y subunit B-46.1e-5781.82Show/hide
Query:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER
        MENHNNGDEFLELPIANVERIMKKI+PQKGKISKEAKKTMQECANEFISFVTSEAAQRCH ENRRTLNGDDI WAF S GLDNYA++FAKYL KYREVER
Subjt:  MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVER

Query:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN
        +KVDE+KCKITQ+L   +DDDK        ++G EIGETSSPN
Subjt:  MKVDEHKCKITQQLFLLEDDDK-------VVNGREIGETSSPN

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-47.3e-3163Show/hide
Query:  DEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHK
        DE   LPIANV R+MK+I+P   KISKEAK+T+QECA EFISFVT EA+++CH ENR+T+NGDDI+WA  +LGLDNYAD   ++L KYRE ER + + +K
Subjt:  DEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHK

O82248 Nuclear transcription factor Y subunit B-51.9e-2660.64Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEH
        LPIANV RIMK I+P   K+SKEAK+TMQEC +EFISFVT EA+ +CH E R+T+NGDDI WA  +LG D+YA    KYL +YR +E  K + H
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEH

Q60EQ4 Nuclear transcription factor Y subunit B-37.8e-2557.47Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVE
        LPIAN+ RIMKK +P  GKI+K+AK+T+QEC +EFISF+TSEA+ +C  E R+T+NGDD+ WA  +LG ++Y +    YL KYRE+E
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVE

Q67XJ2 Nuclear transcription factor Y subunit B-106.0e-2558.62Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVE
        LPIAN+ RIMK+ +P  GKI+K+AK+TMQEC +EFISFVTSEA+ +C  E R+T+NGDD+ WA  +LG ++Y D    YL++YRE+E
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVE

Q9SIT9 Nuclear transcription factor Y subunit B-71.4e-2655.24Show/hide
Query:  NHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMK
        N+NN ++   LPIANV RIMKK++P  GKISK+AK+T+QEC +EFISFVT EA+ +C  E R+T+NGDDI WA  +LG ++Y      YL KYR+ E  K
Subjt:  NHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMK

Query:  VDEHK
        V+  K
Subjt:  VDEHK

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B45.2e-3263Show/hide
Query:  DEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHK
        DE   LPIANV R+MK+I+P   KISKEAK+T+QECA EFISFVT EA+++CH ENR+T+NGDDI+WA  +LGLDNYAD   ++L KYRE ER + + +K
Subjt:  DEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHK

AT2G13570.1 nuclear factor Y, subunit B71.0e-2755.24Show/hide
Query:  NHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMK
        N+NN ++   LPIANV RIMKK++P  GKISK+AK+T+QEC +EFISFVT EA+ +C  E R+T+NGDDI WA  +LG ++Y      YL KYR+ E  K
Subjt:  NHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMK

Query:  VDEHK
        V+  K
Subjt:  VDEHK

AT2G47810.1 nuclear factor Y, subunit B51.3e-2760.64Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEH
        LPIANV RIMK I+P   K+SKEAK+TMQEC +EFISFVT EA+ +CH E R+T+NGDDI WA  +LG D+YA    KYL +YR +E  K + H
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEH

AT3G53340.1 nuclear factor Y, subunit B104.2e-2658.62Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVE
        LPIAN+ RIMK+ +P  GKI+K+AK+TMQEC +EFISFVTSEA+ +C  E R+T+NGDD+ WA  +LG ++Y D    YL++YRE+E
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVE

AT4G14540.1 nuclear factor Y, subunit B32.1e-2557.78Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMK
        LPIANV RIMKK +P   KISK+AK+T+QEC +EFISF+T EA+ +C  E R+T+NGDD+ WA  +LG ++Y +    YL KYREVE  K
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCATAATAATGGAGATGAGTTTCTTGAGCTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAA
GAAGACAATGCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACAATGAGAATAGAAGAACTCTCAATGGTGATGATATTTATT
GGGCATTTGGTTCTCTTGGCTTAGATAATTATGCTGACATTTTTGCTAAGTACTTGCTTAAGTATAGGGAAGTTGAAAGAATGAAGGTTGATGAACATAAATGTAAAATT
ACTCAACAACTATTCCTACTAGAAGACGATGATAAAGTTGTTAATGGTCGAGAGATCGGTGAAACCTCTTCACCAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACCATAATAATGGAGATGAGTTTCTTGAGCTACCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAA
GAAGACAATGCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACAATGAGAATAGAAGAACTCTCAATGGTGATGATATTTATT
GGGCATTTGGTTCTCTTGGCTTAGATAATTATGCTGACATTTTTGCTAAGTACTTGCTTAAGTATAGGGAAGTTGAAAGAATGAAGGTTGATGAACATAAATGTAAAATT
ACTCAACAACTATTCCTACTAGAAGACGATGATAAAGTTGTTAATGGTCGAGAGATCGGTGAAACCTCTTCACCAAATTAG
Protein sequenceShow/hide protein sequence
MENHNNGDEFLELPIANVERIMKKIVPQKGKISKEAKKTMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYADIFAKYLLKYREVERMKVDEHKCKI
TQQLFLLEDDDKVVNGREIGETSSPN