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PI0012050 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012050
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationchr11:11818040..11818373
RNA-Seq ExpressionPI0012050
SyntenyPI0012050
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-1859.09Show/hide
Query:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFRVDDDNQLKIDDVRV
        MMP+FG  YCD EV T YYDSGVGPSSSYMD GPSTSYMHGH H +   EHNEYL +EAPT+   R     E++ + +NQ +++  RV
Subjt:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFRVDDDNQLKIDDVRV

KAA0037866.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.9e-1852.07Show/hide
Query:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD
        MMP+FG  Y D      S+ G  YY+S  GPSS+     Y D G  PS+SYMHGHG G    EHNEYL YE PT             I+R   N EFRVD
Subjt:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD

Query:  DDNQLKIDDVRVVEHIDFLLF
        DDNQL+I DV+VVEHIDF  F
Subjt:  DDNQLKIDDVRVVEHIDFLLF

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-2460.19Show/hide
Query:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHG-----HIC-EEHNEYLCYEAPTD---RIKRTQGNLEFRVDDDNQLKIDDVRVVEH
        MMP+FGA YCDSEVGT YYD+G+ P SSYMD GPS SYMHGHG       +IC  +H +    +  T+   R KRT+ N+EFRV+ DNQLKID+V+VVEH
Subjt:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHG-----HIC-EEHNEYLCYEAPTD---RIKRTQGNLEFRVDDDNQLKIDDVRVVEH

Query:  IDFLLFFK
        IDFLL  K
Subjt:  IDFLLFFK

TYK09816.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.9e-1852.07Show/hide
Query:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD
        MMP+FG  Y D      S+ G  YY+S  GPSS+     Y D G  PS+SYMHGHG G    EHNEYL YE PT             I+R   N EFRVD
Subjt:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD

Query:  DDNQLKIDDVRVVEHIDFLLF
        DDNQL+I DV+VVEHIDF  F
Subjt:  DDNQLKIDDVRVVEHIDFLLF

TYK18868.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.3e-1864.86Show/hide
Query:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFR
        MM +FG+RYCDSEVGTRYY+ GVGPSSSYMD GPSTSYMHGHGHG+   EHNEYL +E P +   + +   E++
Subjt:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFR

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-1859.09Show/hide
Query:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFRVDDDNQLKIDDVRV
        MMP+FG  YCD EV T YYDSGVGPSSSYMD GPSTSYMHGH H +   EHNEYL +EAPT+   R     E++ + +NQ +++  RV
Subjt:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFRVDDDNQLKIDDVRV

A0A5A7T6Q6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-1852.07Show/hide
Query:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD
        MMP+FG  Y D      S+ G  YY+S  GPSS+     Y D G  PS+SYMHGHG G    EHNEYL YE PT             I+R   N EFRVD
Subjt:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD

Query:  DDNQLKIDDVRVVEHIDFLLF
        DDNQL+I DV+VVEHIDF  F
Subjt:  DDNQLKIDDVRVVEHIDFLLF

A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein7.7e-2560.19Show/hide
Query:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHG-----HIC-EEHNEYLCYEAPTD---RIKRTQGNLEFRVDDDNQLKIDDVRVVEH
        MMP+FGA YCDSEVGT YYD+G+ P SSYMD GPS SYMHGHG       +IC  +H +    +  T+   R KRT+ N+EFRV+ DNQLKID+V+VVEH
Subjt:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHG-----HIC-EEHNEYLCYEAPTD---RIKRTQGNLEFRVDDDNQLKIDDVRVVEH

Query:  IDFLLFFK
        IDFLL  K
Subjt:  IDFLLFFK

A0A5D3CHF6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-1852.07Show/hide
Query:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD
        MMP+FG  Y D      S+ G  YY+S  GPSS+     Y D G  PS+SYMHGHG G    EHNEYL YE PT             I+R   N EFRVD
Subjt:  MMPSFGARYCD------SEVGTRYYDSGVGPSSS-----YMDAG--PSTSYMHGHGHGHICEEHNEYLCYEAPT-----------DRIKRTQGNLEFRVD

Query:  DDNQLKIDDVRVVEHIDFLLF
        DDNQL+I DV+VVEHIDF  F
Subjt:  DDNQLKIDDVRVVEHIDFLLF

A0A5D3D5N3 GATA zinc finger domain-containing protein 10-like isoform X26.3e-1964.86Show/hide
Query:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFR
        MM +FG+RYCDSEVGTRYY+ GVGPSSSYMD GPSTSYMHGHGHG+   EHNEYL +E P +   + +   E++
Subjt:  MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCATCATTTGGAGCAAGATATTGTGATTCTGAGGTCGGTACACGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCGGACCATCAACTTC
TTACATGCATGGACATGGACACGGACACATCTGCGAAGAACATAACGAATATTTGTGCTATGAAGCACCTACAGACAGAATCAAGAGGACCCAGGGCAACCTAGAGTTCA
GAGTCGATGACGACAACCAACTCAAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATTTTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCATCATTTGGAGCAAGATATTGTGATTCTGAGGTCGGTACACGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCGGACCATCAACTTC
TTACATGCATGGACATGGACACGGACACATCTGCGAAGAACATAACGAATATTTGTGCTATGAAGCACCTACAGACAGAATCAAGAGGACCCAGGGCAACCTAGAGTTCA
GAGTCGATGACGACAACCAACTCAAAATCGACGACGTCCGGGTTGTGGAACACATTGATTTTCTTTTATTTTTTAAATGA
Protein sequenceShow/hide protein sequence
MMPSFGARYCDSEVGTRYYDSGVGPSSSYMDAGPSTSYMHGHGHGHICEEHNEYLCYEAPTDRIKRTQGNLEFRVDDDNQLKIDDVRVVEHIDFLLFFK