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PI0012080 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012080
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpentatricopeptide repeat-containing protein At1g74630
Genome locationchr01:9493541..9495355
RNA-Seq ExpressionPI0012080
SyntenyPI0012080
Gene Ontology termsGO:0006749 - glutathione metabolic process (biological process)
GO:0004364 - glutathione transferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036081.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.6e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
TYJ98889.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.6e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
XP_004137583.1 pentatricopeptide repeat-containing protein At1g74630 [Cucumis sativus]2.6e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
XP_016899355.1 PREDICTED: pentatricopeptide repeat-containing protein At1g74630 [Cucumis melo]2.6e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
XP_038879620.1 pentatricopeptide repeat-containing protein At1g74630-like isoform X2 [Benincasa hispida]3.4e-0575Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR +MSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
TrEMBL top hitse value%identityAlignment
A0A0A0LQH6 DYW_deaminase domain-containing protein1.2e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
A0A1S4DUF7 pentatricopeptide repeat-containing protein At1g746301.2e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
A0A5A7T383 Pentatricopeptide repeat-containing protein1.2e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
A0A5D3BIR8 Pentatricopeptide repeat-containing protein1.2e-0577.78Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+ VE HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
A0A6J1E7P0 uncharacterized protein LOC1114313966.2e-0575Show/hide
Query:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
        + GEKQND+  E HQKLR IMSRLRIE GYVPEVG+
Subjt:  LGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCTAGGCATCTCTACTGAATATCCTCAGCACATTGACCTCTATGTACAGGACAATCTCACCCGTAGGGTTACTATCAACTCAGAACATCTCAGCTTGAAACC
AATAAAAAAGATCAGAGATGTGTTGAGTGATTCGAAAACTGAATTAGCTTTCTCCCTTCGATTTTCTCTTGAAATGAAAAGATTGATGAAGAAAGGTTTAGAAATGGAGC
TTGGTGGAGAAAAGCAAAATGACATGGAAGTAGAGACACATCAAAAGCTAAGGGGGATAATGTCGAGACTAAGGATAGAAGAAGGTTATGTTCCAGAAGTTGGTGCTTCT
ACACGTGCTTCTTACGATAATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTCTAGGCATCTCTACTGAATATCCTCAGCACATTGACCTCTATGTACAGGACAATCTCACCCGTAGGGTTACTATCAACTCAGAACATCTCAGCTTGAAACC
AATAAAAAAGATCAGAGATGTGTTGAGTGATTCGAAAACTGAATTAGCTTTCTCCCTTCGATTTTCTCTTGAAATGAAAAGATTGATGAAGAAAGGTTTAGAAATGGAGC
TTGGTGGAGAAAAGCAAAATGACATGGAAGTAGAGACACATCAAAAGCTAAGGGGGATAATGTCGAGACTAAGGATAGAAGAAGGTTATGTTCCAGAAGTTGGTGCTTCT
ACACGTGCTTCTTACGATAATTTATAG
Protein sequenceShow/hide protein sequence
METLGISTEYPQHIDLYVQDNLTRRVTINSEHLSLKPIKKIRDVLSDSKTELAFSLRFSLEMKRLMKKGLEMELGGEKQNDMEVETHQKLRGIMSRLRIEEGYVPEVGAS
TRASYDNL