; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012083 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012083
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:19163820..19164395
RNA-Seq ExpressionPI0012083
SyntenyPI0012083
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.1e-1336.71Show/hide
Query:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K
        +GHLT E+P P+ F+++   ++TT+ E+     +GA SSS    IVN  FEQ           +Y    P++                           +
Subjt:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K

Query:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        + F  +  +  RKGN+KME+YL +MKTN DNLGQ GS VPRRA ISQVL  G+ E Y+
Subjt:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

KAA0060208.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.3e-0859.32Show/hide
Query:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        ++ F    F+  RKGNSKMEDYL +MKTNA+NLGQAGS +P R+ ISQVL  G+ E Y+
Subjt:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]1.1e-0861.02Show/hide
Query:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        ++ F  + F+  RKGNS MEDYL +MKTNADNLGQA S +PRRA ISQVL  G+ E Y+
Subjt:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]2.0e-1236Show/hide
Query:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K
        +GHLT E+P P+ F+++   ++TT+ E+     +GA SSS    IVN  FEQ           +Y    P++                           +
Subjt:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K

Query:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLF
        + F  +  +  RKGN+KME+YL +MKTN DNLGQ GS VPRRA ISQ  F
Subjt:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLF

XP_031739915.1 uncharacterized protein LOC116403326 isoform X2 [Cucumis sativus]3.1e-0859.32Show/hide
Query:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        ++ F  + F+  RKG+ KMEDYLC+MKTN DNL QAGSLVP  A ISQVL  G+ E Y+
Subjt:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein5.1e-0961.02Show/hide
Query:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        ++ F  + F+  RKGNS MEDYL +MKTNADNLGQA S +PRRA ISQVL  G+ E Y+
Subjt:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

A0A5A7SIT7 Uncharacterized protein5.2e-1436.71Show/hide
Query:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K
        +GHLT E+P P+ F+++   ++TT+ E+     +GA SSS    IVN  FEQ           +Y    P++                           +
Subjt:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K

Query:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        + F  +  +  RKGN+KME+YL +MKTN DNLGQ GS VPRRA ISQVL  G+ E Y+
Subjt:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

A0A5A7UY76 Integrase, catalytic core1.1e-0859.32Show/hide
Query:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD
        ++ F    F+  RKGNSKMEDYL +MKTNA+NLGQAGS +P R+ ISQVL  G+ E Y+
Subjt:  KKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYD

A0A5D3BCH9 Uncharacterized protein9.9e-1336Show/hide
Query:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K
        +GHLT E+P P+ F+++   ++TT+ E+     +GA SSS    IVN  FEQ           +Y    P++                           +
Subjt:  KGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDK-------IYLVSNPEL---------------------------K

Query:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLF
        + F  +  +  RKGN+KME+YL +MKTN DNLGQ GS VPRRA ISQ  F
Subjt:  KTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLF

A0A5D3E3L7 Uncharacterized protein7.3e-0843.33Show/hide
Query:  LAFEQAEDKIYLVSN-----PELKKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYDGLEWSVDG
        + F  A+D    + N        ++ F    F+  R+GN KMEDYL +MK NADNLGQAGS VP R  ISQVL  G+ E Y+ +   + G
Subjt:  LAFEQAEDKIYLVSN-----PELKKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLGQAGSLVPRRAFISQVLFDGIKECYDGLEWSVDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAACCCTCGCCCTCCCTATTCTCAACCTAAAGGGCATTTAACTCGTGAATCGCCAGGTCCTGCGAGGTTTCTGATGAATGGCCAAGAAACCAGCACCACCATGAT
CGAAGATAGAGATGGCACGAACTTGGGTGCGTCATCAAGTTCCTTCGTCGCAGTCATCGTGAACCTTGCTTTTGAACAAGCTGAAGACAAGATCTATTTGGTGTCTAATC
CAGAGCTGAAGAAGACTTTCTTTGCTAAATTTTTCAGACTACAAAGGAAAGGTAACTCTAAAATGGAGGATTACTTATGTTTAATGAAGACTAATGCTGATAATCTTGGT
CAAGCTGGGAGTCTGGTTCCTAGACGTGCTTTTATTTCTCAGGTGCTGTTTGATGGGATAAAAGAGTGTTATGATGGATTGGAATGGAGTGTGGATGGGATTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAACCCTCGCCCTCCCTATTCTCAACCTAAAGGGCATTTAACTCGTGAATCGCCAGGTCCTGCGAGGTTTCTGATGAATGGCCAAGAAACCAGCACCACCATGAT
CGAAGATAGAGATGGCACGAACTTGGGTGCGTCATCAAGTTCCTTCGTCGCAGTCATCGTGAACCTTGCTTTTGAACAAGCTGAAGACAAGATCTATTTGGTGTCTAATC
CAGAGCTGAAGAAGACTTTCTTTGCTAAATTTTTCAGACTACAAAGGAAAGGTAACTCTAAAATGGAGGATTACTTATGTTTAATGAAGACTAATGCTGATAATCTTGGT
CAAGCTGGGAGTCTGGTTCCTAGACGTGCTTTTATTTCTCAGGTGCTGTTTGATGGGATAAAAGAGTGTTATGATGGATTGGAATGGAGTGTGGATGGGATTGAGTGA
Protein sequenceShow/hide protein sequence
MVNPRPPYSQPKGHLTRESPGPARFLMNGQETSTTMIEDRDGTNLGASSSSFVAVIVNLAFEQAEDKIYLVSNPELKKTFFAKFFRLQRKGNSKMEDYLCLMKTNADNLG
QAGSLVPRRAFISQVLFDGIKECYDGLEWSVDGIE