CuGenDBv2

Gene ID	PI0012107
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Ribosome-recycling factor, chloroplastic
Genome location	chr03:25376325..25379099
RNA-Seq Expression	PI0012107
Synteny	PI0012107
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002661 - Ribosome recycling factor IPR023584 - Ribosome recycling factor domain IPR036191 - RRF superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056597.1 ribosome-recycling factor [Cucumis melo var. makuwa]

9.8e-130

95.82

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRGFAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVAL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

KAG7033363.1 frr [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-123

90.87

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNF++LRNFAN S NFSF VND  N WTSE    FALPP  FIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE+LCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

XP_004138478.2 uncharacterized protein LOC101216947 [Cucumis sativus]

3.5e-127

93.54

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MA+FLKRSFSYRNFI+LRNFANQ+CNFSFSVN FS+SWTS+TS  F LPPP FIRE+RRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRAS GMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLE+AIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKKISSSYPKDD+KRLEKEVDELTKKFIKSAEELCK KEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

XP_008441363.1 PREDICTED: ribosome-recycling factor [Cucumis melo]

9.8e-130

95.82

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRGFAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVAL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

XP_023544000.1 uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]

8.8e-123

90.87

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNF++LRNFAN S N SF VND  NSWTSE    FALPP  FIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE+LCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA50 Ribosome-recycling factor, chloroplastic

1.7e-127

93.54

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MA+FLKRSFSYRNFI+LRNFANQ+CNFSFSVN FS+SWTS+TS  F LPPP FIRE+RRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRAS GMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLE+AIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKKISSSYPKDD+KRLEKEVDELTKKFIKSAEELCK KEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

A0A1S3B2S9 Ribosome-recycling factor, chloroplastic

4.7e-130

95.82

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRGFAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVAL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

A0A5D3DLY3 Ribosome-recycling factor, chloroplastic

4.7e-130

95.82

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNFIILRNFANQ+CNFSFS+N FSNSWTS+TSAGFALPP  FIRESRRGFAKGRKSNESSTS+AEAL DIRPTIK+NASSQMEASIVAL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDP+TLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

A0A6J1GLU1 Ribosome-recycling factor, chloroplastic

2.8e-122

90.49

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSFSYRNF++LRNFAN S NFSF V D  N WTSE    FALPP  FIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE+LCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

A0A6J1JKE4 Ribosome-recycling factor, chloroplastic

8.1e-122

90.11

Show/hide

Query:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL
        MAMFLKRSF YR+F++LRNFAN S NFSF VND  N WTSE    FALPP  FIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SGV++PLNQIAAVSVLDSKTLSINPYDPNTLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHIQAMCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKC

Query:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG
        CEDSRQSIRRARQKAMD+VKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE+LCKAKEKEITGG
Subjt:  CEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

SwissProt top hits

e value

%identity

Alignment

A4IMC6 Ribosome-recycling factor

1.2e-26

38.51

Show/hide

Query:  ASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKE
        A  +M+ ++ A S EL+ +R GRA++G+L+ + V+  GV  P+NQ+A +SV +++ L I PYD + +K +E AI++S LGV P  DG  +  VIPPLT+E
Subjt:  ASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKE

Query:  HIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI
          + + KLV K  E+++ ++R  R+ A D +KK+  +S   +D+++    EV +LT   I   + + K KEKE+
Subjt:  HIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI

A8MHH2 Ribosome-recycling factor

2.1e-26

38.76

Show/hide

Query:  IKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPP
        I  N   +M  +I AL  EL+ +R GRA+  MLD I+VE  G   P+ QIAA++  + + +SI PYD + L ++E AI+ S LGV P  DG+ +  ++P 
Subjt:  IKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPP

Query:  LTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI
        LT+E  + + K+  K  ED++  +R  R+ A D +KK+   +   +D++K  + EV ++T KFIK  +EL + KEK+I
Subjt:  LTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI

B8DSA1 Ribosome-recycling factor

1.2e-26

38.55

Show/hide

Query:  TIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIP
        +I  +A  +ME ++ +L  E +KLRTGRAS+ ++D+I V+  G   P++Q+A+VSV DS+TL+I P+D +  + +E AI+ S LG+ P  DG+ +   IP
Subjt:  TIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIP

Query:  PLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI
        PLT+E  + + K+  K  E+++ ++R  R+ A D++KK+       +DD+++   +V +LT +F+  ++E C AKEKEI
Subjt:  PLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI

Q5WFT1 Ribosome-recycling factor

4.2e-27

38.2

Show/hide

Query:  IKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPP
        IKA+A ++M+ +I  LS EL+KLR GRA+  +LD + VE  G + PLNQ+A+V+V +++ L I PYD   + ++E AI+ S LG+ P  DG+ +   IPP
Subjt:  IKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPP

Query:  LTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI
        LT+E  + + +LV+K  E+S+ ++R  R+ A D +KK+       +D+++    ++ +LT  ++   +E  K KE+EI
Subjt:  LTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI

Q9KA66 Ribosome-recycling factor

1.6e-26

Show/hide

Query:  NASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTK
        +A  +M  +  AL  EL+KLR GRA+  MLD I VE  G + PLNQ+A +SV +++ L I P+D +++ ++E AI  S LG+ P  DG  +   IPPLT+
Subjt:  NASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTK

Query:  EHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKK--ISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI
        E  + + KLV K  E+++ ++R  R+ A D +KK        +DD++R+ ++V +LT K+I+  ++  +AKEKEI
Subjt:  EHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKK--ISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI

Arabidopsis top hits

e value

%identity

Alignment

AT3G01800.1 Ribosome recycling factor

3.1e-81

62.64

Show/hide

Query:  MAMFLKRSFSYRN---FIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKS-NESSTSMAEALPDIRPTIKANASSQMEAS
        MAMF++R+ S RN   F+   +   QS +FSF ++  +          F L  P F+R+SRRGFAKG+KS ++S T M +A PDI PT+KA ASSQMEA+
Subjt:  MAMFLKRSFSYRN---FIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKS-NESSTSMAEALPDIRPTIKANASSQMEAS

Query:  IVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKL
        I ALS +L+KLRTGRA+ GMLDHI+VET GVK+PLN +A VSVLD KTLS+NPYDP+T+K LE AI++SPLG+ P++DG+RL+A IP LTKEHIQAMCK+
Subjt:  IVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKL

Query:  VTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEIT
        VTK  E  +QSIRRARQKA+D++KK  SS PKD++KRLEKEVDELTKKF+KSAE++CK+KEKEIT
Subjt:  VTKCCEDSRQSIRRARQKAMDSVKKISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEIT

AT3G63190.1 ribosome recycling factor, chloroplast precursor

1.3e-23

35.36

Show/hide

Query:  RPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAV
        +  I+ +  S+ME +I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D  +L + PYD ++LK +E AI++S LGV P  DG+ +   
Subjt:  RPTIKANASSQMEASIVALSGELSKLRTGRASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAV

Query:  IPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI
        +PPLT +  + + K+V K  E+ + ++R  R+ A+ S  K+       +D++K L  ++ +L   ++K  EEL K KEKE+
Subjt:  IPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVKKI--SSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCAAAGTTGTAACTTTTCGTTCTCTGTCAACGATTTCTCAAACTC
ATGGACCTCCGAAACCTCCGCCGGATTTGCTCTTCCTCCTCCACATTTCATCCGAGAGAGTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTA
TGGCTGAGGCATTGCCTGATATTAGACCCACAATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGC
AGGGCATCATCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCGAAAACATTGTCAAT
AAATCCTTATGATCCGAATACACTAAAGAATTTAGAGAGTGCTATAATCTCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCAC
CATTGACCAAAGAACATATCCAGGCTATGTGTAAGCTGGTCACTAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATTCAGTTAAA
AAAATTAGCTCAAGCTACCCGAAGGATGACATGAAAAGACTGGAAAAGGAAGTTGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGAACTCTGCAAGGCAAAGGA
GAAGGAGATCACTGGAGGTTAA

mRNA sequence

Show/hide mRNA sequence

GTTGGGTTTTACGAAAAACCCTAATTAGAAAACTTGGCAAACATCGAAACGAAGAAATAGGTTTGGTGGTTCCGTCAGTTGGAGCATGAACCTCTAGTTCAATGGCTATG
TTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCAAAGTTGTAACTTTTCGTTCTCTGTCAACGATTTCTCAAACTCATGGACCTC
CGAAACCTCCGCCGGATTTGCTCTTCCTCCTCCACATTTCATCCGAGAGAGTCGTCGGGGTTTTGCTAAAGGCCGAAAATCAAATGAATCTTCTACAAGTATGGCTGAGG
CATTGCCTGATATTAGACCCACAATTAAAGCAAACGCTAGCTCGCAAATGGAGGCTTCGATAGTTGCATTATCAGGAGAATTAAGCAAGCTTCGAACGGGCAGGGCATCA
TCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGCTGCCGTTGAATCAGATTGCGGCTGTATCGGTCTTGGATTCGAAAACATTGTCAATAAATCCTTA
TGATCCGAATACACTAAAGAATTTAGAGAGTGCTATAATCTCATCTCCTTTAGGTGTAGCACCAAGAGTAGACGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCA
AAGAACATATCCAGGCTATGTGTAAGCTGGTCACTAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATTCAGTTAAAAAAATTAGC
TCAAGCTACCCGAAGGATGACATGAAAAGACTGGAAAAGGAAGTTGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGAACTCTGCAAGGCAAAGGAGAAGGAGAT
CACTGGAGGTTAAAAAAACTTATAGTTCCCAATTTTGACAGATGAATCATTCTAATAATTTGTTGAATATTTGTTTCTAAAATTAAGGCGTCCCATTATAGAGCTTTTGA
TAATCATAGCGACGGATGTAACAGTGGATGTTGAAATGGTCATTTCTCGTCAGCAAGCTCTGGTTCAATATTTTACCATTTCAATAATGTAGGAAGCTAGGAACTTGAAA
CCTCTATGAAATGAAATTCTCCCGAGTTGGATATCTGAGTTTATAGAAGAGTGATATTTTGTAGATCTAACAATTGAAAGATTTTACTGAAAGAAGCCGTATATGTACTT
TA

Protein sequence

Show/hide protein sequence

MAMFLKRSFSYRNFIILRNFANQSCNFSFSVNDFSNSWTSETSAGFALPPPHFIRESRRGFAKGRKSNESSTSMAEALPDIRPTIKANASSQMEASIVALSGELSKLRTG
RASSGMLDHIIVETSGVKLPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIISSPLGVAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDSVK
KISSSYPKDDMKRLEKEVDELTKKFIKSAEELCKAKEKEITGG

PI0012107 (gene) of Melon (PI 482460) v1 genome