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PI0012128 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012128
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description30S ribosomal protein S18, chloroplastic
Genome locationtig00003741:43579..43884
RNA-Seq ExpressionPI0012128
SyntenyPI0012128
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001648 - Ribosomal protein S18
IPR018275 - Ribosomal protein S18, conserved site
IPR036870 - Ribosomal protein S18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QTA71770.1 ribosomal protein S18 [Coriaria nepalensis]7.0e-4499.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTART+GLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_004072484.1 ribosomal protein S18 [Corynocarpus laevigatus]2.7e-4399.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTR 
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_009236302.1 ribosomal protein S18 [Gynostemma pentaphyllum]1.2e-4399.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_009439913.1 ribosomal protein S18 [Gynostemma caulopterum]1.2e-4399.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVN+LTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
YP_009526324.1 ribosomal protein S18 [Hemsleya lijiangensis]2.0e-4399.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLIT AIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
TrEMBL top hitse value%identityAlignment
A0A120L1C7 30S ribosomal protein S18, chloroplastic5.8e-4499.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A291IAQ8 30S ribosomal protein S18, chloroplastic5.8e-4499.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVN+LTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A291IB68 30S ribosomal protein S18, chloroplastic5.8e-4499.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A291IBF4 30S ribosomal protein S18, chloroplastic5.8e-4499.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
A0A2L0WR51 30S ribosomal protein S18, chloroplastic5.8e-4499.01Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVN+LTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
SwissProt top hitse value%identityAlignment
A0ZZ57 30S ribosomal protein S18, chloroplastic3.9e-4597.03Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSEST RT  LRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
B1A957 30S ribosomal protein S18, chloroplastic3.3e-4495.05Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLF KSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILS LPFLNNEKQFERSEST +T GLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Q0G9U0 30S ribosomal protein S18, chloroplastic4.3e-4495.05Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKR FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFER+EST RT GLR RN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Q0ZIZ8 30S ribosomal protein S18, chloroplastic1.9e-4496.04Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKR FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILS LPFLNNEKQFER+ESTART GLRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Q2L928 30S ribosomal protein S18, chloroplastic1.9e-4496.04Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILS LPFLNNEKQFERSEST RT  LRTRN
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K
Arabidopsis top hitse value%identityAlignment
ATCG00650.1 ribosomal protein S181.3e-4392.08Show/hide
Query:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN
        M+KSKRLF KSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNR+TLKQQRLITIAIKQARILSLLPFLNN+KQFERSEST RT  LRTR 
Subjt:  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRN

Query:  K
        K
Subjt:  K

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATCCAATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAG
TCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTATCTT
TGTTACCTTTTCTTAATAATGAGAAACAATTTGAAAGAAGCGAGTCGACCGCTAGAACTATTGGTCTTAGAACCAGGAATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATCCAATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAG
TCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTATCTT
TGTTACCTTTTCTTAATAATGAGAAACAATTTGAAAGAAGCGAGTCGACCGCTAGAACTATTGGTCTTAGAACCAGGAATAAATAG
Protein sequenceShow/hide protein sequence
MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTARTIGLRTRNK