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PI0012168 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012168
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description60S ribosomal protein L36
Genome locationchr03:11189893..11190781
RNA-Seq ExpressionPI0012168
SyntenyPI0012168
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579388.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0463.08Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGKA SKRVLFVR+LI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

XP_011008473.1 PREDICTED: 60S ribosomal protein L36-1-like isoform X1 [Populus euphratica]1.1e-0463.08Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGKA SKRVLFVR+LI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

XP_011008474.1 PREDICTED: 60S ribosomal protein L36-2-like isoform X2 [Populus euphratica]1.1e-0463.08Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGKA SKRVLFVR+LI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

XP_023907749.1 60S ribosomal protein L36-2-like [Quercus suber]8.2e-0563.08Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKRVLFVRNLI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

XP_038888040.1 60S ribosomal protein L36-3-like [Benincasa hispida]6.3e-0560.66Show/hide
Query:  SKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNLT
        SKRVLFVRNLIW+V            LLKV KDKR LKV KRKL TH R KKK+EE S+++
Subjt:  SKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNLT

TrEMBL top hitse value%identityAlignment
A0A5N6LFM1 60S ribosomal protein L366.8e-0560Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR  FVRNLIW+V            LLKV KDKRALKV KRKL TH R KKK+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

A0A6J1E2F7 60S ribosomal protein L365.2e-0563.08Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGKA SKRVLFVR+LI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

A0A6J1IDA3 60S ribosomal protein L365.2e-0563.08Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGKA SKRVLFVR+LI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

A0A7N2MG83 60S ribosomal protein L366.8e-0564.06Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSN
        KGK  SKRVLFVRNLI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSN

I1HT92 60S ribosomal protein L366.8e-0561.54Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK+ +KRVLFVRNLI +V            LLKV KDKRALKV KRKL TH R KKK+EE SN+
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-12.9e-0553.85Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+R LI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

Q9LZ57 60S ribosomal protein L36-35.9e-0655.38Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+RNLI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

Q9M352 60S ribosomal protein L36-25.9e-0655.38Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+RNLI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein2.1e-0653.85Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+R LI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

AT3G53740.2 Ribosomal protein L36e family protein4.2e-0755.38Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+RNLI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

AT3G53740.3 Ribosomal protein L36e family protein4.2e-0755.38Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+RNLI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

AT3G53740.4 Ribosomal protein L36e family protein4.2e-0755.38Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+RNLI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL

AT5G02450.1 Ribosomal protein L36e family protein4.2e-0755.38Show/hide
Query:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL
        KGK  SKR +F+RNLI +V            LLKV KDKRALKV KRKL TH R K+K+EE S++
Subjt:  KGKAYSKRVLFVRNLIWKV------------LLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTTCAGACTCCTTATTCAATGGCACAACGAAGGGTAAAGCTTATAGCAAAAGAGTTCTCTTTGTGAGGAATTTAATCTGGAAAGTTCTTCTTAAAGTTGTAAA
GGACAAGAGAGCACTAAAAGTGACTAAGAGAAAGTTGAAAACTCACAACAGAGGTAAGAAGAAGAAAGAAGAGACGTCCAACCTTACGGCTTATTTTACAAGCAATAAAA
AGAATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTTCAGACTCCTTATTCAATGGCACAACGAAGGGTAAAGCTTATAGCAAAAGAGTTCTCTTTGTGAGGAATTTAATCTGGAAAGTTCTTCTTAAAGTTGTAAA
GGACAAGAGAGCACTAAAAGTGACTAAGAGAAAGTTGAAAACTCACAACAGAGGTAAGAAGAAGAAAGAAGAGACGTCCAACCTTACGGCTTATTTTACAAGCAATAAAA
AGAATAGTTGA
Protein sequenceShow/hide protein sequence
METSDSLFNGTTKGKAYSKRVLFVRNLIWKVLLKVVKDKRALKVTKRKLKTHNRGKKKKEETSNLTAYFTSNKKNS