; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012188 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012188
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVQ motif-containing protein 8
Genome locationchr10:20468634..20469131
RNA-Seq ExpressionPI0012188
SyntenyPI0012188
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000466 - maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0007276 - gamete generation (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0070545 - PeBoW complex (cellular component)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25
IPR039833 - VQ motif-containing protein 8, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013019.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-2754.42Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRK----PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTT
        MSPPK   I+GPRP PLL+H  SR IRK    PQLR+P+IIYTHSPKIIHT PKDFMALVQRLTG +PP               +++  +DN+ SS V T
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRK----PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTT

Query:  EEDINEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF
        EED     SNC +          F+  +L+NSLSPSFM+FLK LPEF
Subjt:  EEDINEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF

KGN52621.2 hypothetical protein Csa_008052 [Cucumis sativus]1.0e-4089.62Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEED
        MSPPKSSEINGPRPSPLLIH+ SRLIRKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG NPPPPLPL   PS   SLSERNLNDNDSSSGVTTEED
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEED

Query:  INEKQS
        INEKQ+
Subjt:  INEKQS

XP_008466850.1 PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Cucumis melo]1.6e-5783.92Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI
        MSPPKSS+ING RPSPLLIH+DSRL+RKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP P            ERN NDNDS+SGVT+EED+
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI

Query:  NEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF
        NEKQSNCSVLKYSSDVTTPFSSPA L+SLSPSFMDFLKALPEF
Subjt:  NEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF

XP_022150646.1 VQ motif-containing protein 8, chloroplastic [Momordica charantia]4.6e-3357.31Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLN---DNDSSSGVT
        MSP KS +INGPRPSPLLIH  SRLIRK  PQLRQPLIIYTHSPKIIHT PKDFMALVQRLTGF PPPP    D        S+RN N   DNDSSS +T
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLN---DNDSSSGVT

Query:  TEED----------INEKQSNCSVLKYSSDV-------------TTPFSSPALLNSLSPSFMDFLKALPEF
         E +          + E QS      + +DV              T F+SP L NSLSPSFM+FLK LPEF
Subjt:  TEED----------INEKQSNCSVLKYSSDV-------------TTPFSSPALLNSLSPSFMDFLKALPEF

XP_038893302.1 VQ motif-containing protein 8, chloroplastic [Benincasa hispida]8.6e-5677.22Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI
        MSPPKS EINGPRPSPLLIH DSR IRKPQLRQP+IIYTHSPKIIHT PKDFMALVQRLTGFNPPPP P S+  +LSLS SERN NDNDSSSG+TTEE+I
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI

Query:  NE---------------KQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF
        NE               +QSN S+L+YSSDVTTPFSSPAL+NSLSPSFM+FLKALPEF
Subjt:  NE---------------KQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF

TrEMBL top hitse value%identityAlignment
A0A0A0KT78 VQ domain-containing protein2.4e-5990.41Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEED
        MSPPKSSEINGPRPSPLLIH+ SRLIRKP QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG NPPPPLPL   PS   SLSERNLNDNDSSSGVTTEED
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRKP-QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEED

Query:  INEKQSNCSVLKYSS-DVTTPFSSPALL-NSLSPSFMDFLKALPEF
        INEKQSNCSVLKYSS DVTTPFSSPA L +SLSPSFMDFLKALPEF
Subjt:  INEKQSNCSVLKYSS-DVTTPFSSPALL-NSLSPSFMDFLKALPEF

A0A1S3CS67 VQ motif-containing protein 8, chloroplastic-like7.6e-5883.92Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI
        MSPPKSS+ING RPSPLLIH+DSRL+RKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP P            ERN NDNDS+SGVT+EED+
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI

Query:  NEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF
        NEKQSNCSVLKYSSDVTTPFSSPA L+SLSPSFMDFLKALPEF
Subjt:  NEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF

A0A5D3CFH5 VQ motif-containing protein 87.6e-5883.92Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI
        MSPPKSS+ING RPSPLLIH+DSRL+RKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPP P            ERN NDNDS+SGVT+EED+
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDI

Query:  NEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF
        NEKQSNCSVLKYSSDVTTPFSSPA L+SLSPSFMDFLKALPEF
Subjt:  NEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF

A0A6J1DC48 VQ motif-containing protein 8, chloroplastic2.2e-3357.31Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLN---DNDSSSGVT
        MSP KS +INGPRPSPLLIH  SRLIRK  PQLRQPLIIYTHSPKIIHT PKDFMALVQRLTGF PPPP    D        S+RN N   DNDSSS +T
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRK--PQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLN---DNDSSSGVT

Query:  TEED----------INEKQSNCSVLKYSSDV-------------TTPFSSPALLNSLSPSFMDFLKALPEF
         E +          + E QS      + +DV              T F+SP L NSLSPSFM+FLK LPEF
Subjt:  TEED----------INEKQSNCSVLKYSSDV-------------TTPFSSPALLNSLSPSFMDFLKALPEF

A0A6P6V8N0 VQ motif-containing protein 8, chloroplastic-like1.7e-1738.14Show/hide
Query:  INGPRPSPLLIHSDSRLIRKP---------------------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPL---SDKPSLSLSLSERN
        INGPRPSPL I+ DS +I+KP                     Q RQP+IIYTHSPKIIHT PKDFMALVQ+LTGF+      +   S +   ++++S+  
Subjt:  INGPRPSPLLIHSDSRLIRKP---------------------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPL---SDKPSLSLSLSERN

Query:  LNDNDSSSGVTTEEDINEKQSNCSVLKYSSDVTTP-----------------------------------FSSPALLNSLSPSFMDFLKALPEF
          DNDSSS   T +D  E  +   V+K SS   +P                                   F+SP +++SLSPSF++F+K LPE+
Subjt:  LNDNDSSSGVTTEEDINEKQSNCSVLKYSSDVTTP-----------------------------------FSSPALLNSLSPSFMDFLKALPEF

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B4.5e-0740.24Show/hide
Query:  PKSSEINGPRPSPLLIHSDS-RLIRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG
        P+S    GP+P+PL +  DS ++I+KP L                         P+ IYT +P+IIHTHP +FM LVQRLTG
Subjt:  PKSSEINGPRPSPLLIHSDS-RLIRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG

Q8LGD5 Protein MKS14.1e-0841.67Show/hide
Query:  EINGPRPSPLLIHSDSRLIRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN
        +I GPRPSPL +H DS  I+KP                  R+P++IY  SPK++H    +FM +VQRLTG +
Subjt:  EINGPRPSPLLIHSDSRLIRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN

Q9CA36 VQ motif-containing protein 8, chloroplastic2.3e-1135.33Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDS
        M P + +EING RPS L +  +S  I+K         P  R  P+IIY HSPK+IHT  +DFMALVQRLTG +       S+  S   S+    +N  D 
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDS

Query:  SSGVTTEEDINEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKAL
        ++     +D  ++Q    +  ++    T F SP  L  +SP+  D  + L
Subjt:  SSGVTTEEDINEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKAL

Q9LS54 VQ motif-containing protein 209.7e-1053.33Show/hide
Query:  PRPSPLLIHSDSRLIRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG
        P P  L ++ DS +I+KP          + R P+IIYTH+P+IIHT+PKDFMALVQ+LTG
Subjt:  PRPSPLLIHSDSRLIRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding3.2e-0840.24Show/hide
Query:  PKSSEINGPRPSPLLIHSDS-RLIRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG
        P+S    GP+P+PL +  DS ++I+KP L                         P+ IYT +P+IIHTHP +FM LVQRLTG
Subjt:  PKSSEINGPRPSPLLIHSDS-RLIRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG

AT1G21326.1 VQ motif-containing protein4.5e-1045.12Show/hide
Query:  PKSSEINGPRPSPLLIHSDS-RLIRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG
        P+S  I GPRP PL +  DS ++I+KP L                         P+IIYT SP+IIHTHP +FM LVQRLTG
Subjt:  PKSSEINGPRPSPLLIHSDS-RLIRKPQLRQ-----------------------PLIIYTHSPKIIHTHPKDFMALVQRLTG

AT1G68450.1 VQ motif-containing protein1.6e-1235.33Show/hide
Query:  MSPPKSSEINGPRPSPLLIHSDSRLIRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDS
        M P + +EING RPS L +  +S  I+K         P  R  P+IIY HSPK+IHT  +DFMALVQRLTG +       S+  S   S+    +N  D 
Subjt:  MSPPKSSEINGPRPSPLLIHSDSRLIRK---------PQLR-QPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDS

Query:  SSGVTTEEDINEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKAL
        ++     +D  ++Q    +  ++    T F SP  L  +SP+  D  + L
Subjt:  SSGVTTEEDINEKQSNCSVLKYSSDVTTPFSSPALLNSLSPSFMDFLKAL

AT3G18360.1 VQ motif-containing protein6.9e-1153.33Show/hide
Query:  PRPSPLLIHSDSRLIRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG
        P P  L ++ DS +I+KP          + R P+IIYTH+P+IIHT+PKDFMALVQ+LTG
Subjt:  PRPSPLLIHSDSRLIRKP----------QLRQPLIIYTHSPKIIHTHPKDFMALVQRLTG

AT3G18690.1 MAP kinase substrate 12.9e-0941.67Show/hide
Query:  EINGPRPSPLLIHSDSRLIRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN
        +I GPRPSPL +H DS  I+KP                  R+P++IY  SPK++H    +FM +VQRLTG +
Subjt:  EINGPRPSPLLIHSDSRLIRKPQL----------------RQPLIIYTHSPKIIHTHPKDFMALVQRLTGFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCACCTAAATCTTCCGAGATCAATGGCCCTCGCCCTTCTCCTCTCTTAATTCACAGCGATTCTCGTCTTATTCGTAAGCCCCAGCTCCGGCAGCCACTCATCAT
TTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATTTCATGGCATTGGTTCAACGCCTCACTGGCTTCAACCCACCACCGCCGCTGCCGCTGTCTGACAAAC
CCTCCTTGTCGTTGTCGTTGTCGGAGAGAAATTTGAACGACAATGATTCTTCGTCTGGTGTGACGACGGAGGAGGATATTAATGAAAAACAGAGTAATTGTTCTGTTCTT
AAATATTCTTCTGATGTTACGACGCCCTTTTCCTCCCCTGCTTTGCTTAATTCCTTATCCCCTTCTTTCATGGACTTTCTTAAAGCCCTCCCTGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATTAAAATTACCAATCCAATCCCAAATCTCTCTGTTTTTCCTAATTAATAATAAAATTCATCCACCATGAGCCCACCTAAATCTTCCGAGATCAATGGCCCTCGCCCTTC
TCCTCTCTTAATTCACAGCGATTCTCGTCTTATTCGTAAGCCCCAGCTCCGGCAGCCACTCATCATTTACACCCATTCCCCCAAAATCATCCACACCCACCCTAAGGATT
TCATGGCATTGGTTCAACGCCTCACTGGCTTCAACCCACCACCGCCGCTGCCGCTGTCTGACAAACCCTCCTTGTCGTTGTCGTTGTCGGAGAGAAATTTGAACGACAAT
GATTCTTCGTCTGGTGTGACGACGGAGGAGGATATTAATGAAAAACAGAGTAATTGTTCTGTTCTTAAATATTCTTCTGATGTTACGACGCCCTTTTCCTCCCCTGCTTT
GCTTAATTCCTTATCCCCTTCTTTCATGGACTTTCTTAAAGCCCTCCCTGAATTTTAA
Protein sequenceShow/hide protein sequence
MSPPKSSEINGPRPSPLLIHSDSRLIRKPQLRQPLIIYTHSPKIIHTHPKDFMALVQRLTGFNPPPPLPLSDKPSLSLSLSERNLNDNDSSSGVTTEEDINEKQSNCSVL
KYSSDVTTPFSSPALLNSLSPSFMDFLKALPEF