; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012226 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012226
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr09:16481732..16483069
RNA-Seq ExpressionPI0012226
SyntenyPI0012226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.1e-2747.69Show/hide
Query:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ
        DG+ FH EEN+  WK+VV  R+ DE  +SD+HHSC+ IM+LI+K  LS  +S + P YP+LI   IVN  +++NDPSSPD+  +H+RGF F  SP  IN 
Subjt:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ

Query:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT
        F+G V+ ++ S +  S D L  EL+  T++
Subjt:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT

KAA0039208.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.2e-2849.62Show/hide
Query:  VSHDGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLA
        VS DG+ FH +ENV+ WK+VV  RL DE  V D+H SC+ IMDLI++ GL+  +  + P YP+LI   IVNF    NDPSSPD+   HVRGF F+ SP  
Subjt:  VSHDGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLA

Query:  INQFLGIVLPMDLSATYPSPDTLVYELTDGTIT
        IN+FLG V+ +D S++ PS   L   L+  T++
Subjt:  INQFLGIVLPMDLSATYPSPDTLVYELTDGTIT

KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]1.2e-2746.15Show/hide
Query:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ
        +G+ FH EENV+ WK+VV  R+ DE  +SD+HHSC+ IM+LI+K GLS  +S + P YP+LI   IVN  +  NDPSSP++  +H++GF F  SP  IN 
Subjt:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ

Query:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT
        FLG  + ++ S + P+ D L + L+ G ++
Subjt:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT

TYJ96199.1 uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa]2.7e-2748.06Show/hide
Query:  GVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQF
        G+ FH EENV+ WK+VV  R+ DE  +S++HHSC+ I++LI+K GLS  +S +  +YPKLI   IVN S+  NDPSSPD+  +H+RGF F  SP  IN F
Subjt:  GVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQF

Query:  LGIVLPMDLSATYPSPDTLVYELTDGTIT
        LG  + ++ S + PS D L   L+ G ++
Subjt:  LGIVLPMDLSATYPSPDTLVYELTDGTIT

XP_008454699.1 PREDICTED: uncharacterized protein LOC103495053 [Cucumis melo]2.1e-2747.69Show/hide
Query:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ
        DG+ FH EEN+  WK+VV  R+ DE  +SD+HHSC+ IM+LI+K  LS  +S + P YP+LI   IVN  +++NDPSSPD+  +H+RGF F  SP  IN 
Subjt:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ

Query:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT
        F+G V+ ++ S +  S D L  EL+  T++
Subjt:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT

TrEMBL top hitse value%identityAlignment
A0A1S3C0F4 uncharacterized protein LOC1034950531.0e-2747.69Show/hide
Query:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ
        DG+ FH EEN+  WK+VV  R+ DE  +SD+HHSC+ IM+LI+K  LS  +S + P YP+LI   IVN  +++NDPSSPD+  +H+RGF F  SP  IN 
Subjt:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ

Query:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT
        F+G V+ ++ S +  S D L  EL+  T++
Subjt:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT

A0A5A7VFF7 Uncharacterized protein5.9e-2846.15Show/hide
Query:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ
        +G+ FH EENV+ WK+VV  R+ DE  +SD+HHSC+ IM+LI+K GLS  +S + P YP+LI   IVN  +  NDPSSP++  +H++GF F  SP  IN 
Subjt:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ

Query:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT
        FLG  + ++ S + P+ D L + L+ G ++
Subjt:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT

A0A5D3B7L1 Gag-pol polyprotein1.0e-2747.69Show/hide
Query:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ
        DG+ FH EEN+  WK+VV  R+ DE  +SD+HHSC+ IM+LI+K  LS  +S + P YP+LI   IVN  +++NDPSSPD+  +H+RGF F  SP  IN 
Subjt:  DGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQ

Query:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT
        F+G V+ ++ S +  S D L  EL+  T++
Subjt:  FLGIVLPMDLSATYPSPDTLVYELTDGTIT

A0A5D3BB19 Uncharacterized protein1.3e-2748.06Show/hide
Query:  GVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQF
        G+ FH EENV+ WK+VV  R+ DE  +S++HHSC+ I++LI+K GLS  +S +  +YPKLI   IVN S+  NDPSSPD+  +H+RGF F  SP  IN F
Subjt:  GVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQF

Query:  LGIVLPMDLSATYPSPDTLVYELTDGTIT
        LG  + ++ S + PS D L   L+ G ++
Subjt:  LGIVLPMDLSATYPSPDTLVYELTDGTIT

A0A5D3D4K0 Gag-pol polyprotein2.0e-2849.62Show/hide
Query:  VSHDGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLA
        VS DG+ FH +ENV+ WK+VV  RL DE  V D+H SC+ IMDLI++ GL+  +  + P YP+LI   IVNF    NDPSSPD+   HVRGF F+ SP  
Subjt:  VSHDGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLVIMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLA

Query:  INQFLGIVLPMDLSATYPSPDTLVYELTDGTIT
        IN+FLG V+ +D S++ PS   L   L+  T++
Subjt:  INQFLGIVLPMDLSATYPSPDTLVYELTDGTIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGTACTCGCCATGGCAACTATCAGTCCAAAGATGTGAAGAAGCCCTCTTCCTCATCTCTCACTGATACTCGTCTCCACAAAGTTGGCACCTCTATTACTAGCAC
CCGTATTAACAAACACGGTGTTCGCATGCCAGGTTCTAAGTCTCCATCTGTCTCTCACAACATAACCCATATTGCTCTACCTTCTAGTGAGGAAGTGTTGGTTTCTCATG
ATGGTGTCTTTTTTCACAGTGAAGAGAACGTTAGACTATGGAAATATGTTGTTCATCATCGTCTTATCGATGAGTTCGAGGTTTCTGATCAACACCACTCTTGTTTAGTC
ATTATGGATTTAATTCAAAAAGTTGGTTTGTCCAGCGCTGTCTCCAAAATTAGCCCTTTATACCCAAAACTCATTTGTGGAATGATTGTCAATTTTTCATCTTCCCTTAA
TGATCCTAGCAGTCCTGACCACTTCGAAATTCATGTGCGTGGTTTTGGTTTTGATCCCTCTCCCTTAGCTATTAATCAGTTCCTTGGTATTGTTCTACCAATGGATTTGT
CAGCTACCTATCCTTCTCCTGATACTCTTGTTTATGAGTTGACCGATGGGACTATAACCTTTAGCAAAATATCCATGGAATTTGAAAGTAGAGACAAAATCTCATTGAAT
TGTGAAAAGAATTCTTTCGAATTGTTCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGTACTCGCCATGGCAACTATCAGTCCAAAGATGTGAAGAAGCCCTCTTCCTCATCTCTCACTGATACTCGTCTCCACAAAGTTGGCACCTCTATTACTAGCAC
CCGTATTAACAAACACGGTGTTCGCATGCCAGGTTCTAAGTCTCCATCTGTCTCTCACAACATAACCCATATTGCTCTACCTTCTAGTGAGGAAGTGTTGGTTTCTCATG
ATGGTGTCTTTTTTCACAGTGAAGAGAACGTTAGACTATGGAAATATGTTGTTCATCATCGTCTTATCGATGAGTTCGAGGTTTCTGATCAACACCACTCTTGTTTAGTC
ATTATGGATTTAATTCAAAAAGTTGGTTTGTCCAGCGCTGTCTCCAAAATTAGCCCTTTATACCCAAAACTCATTTGTGGAATGATTGTCAATTTTTCATCTTCCCTTAA
TGATCCTAGCAGTCCTGACCACTTCGAAATTCATGTGCGTGGTTTTGGTTTTGATCCCTCTCCCTTAGCTATTAATCAGTTCCTTGGTATTGTTCTACCAATGGATTTGT
CAGCTACCTATCCTTCTCCTGATACTCTTGTTTATGAGTTGACCGATGGGACTATAACCTTTAGCAAAATATCCATGGAATTTGAAAGTAGAGACAAAATCTCATTGAAT
TGTGAAAAGAATTCTTTCGAATTGTTCTTGTAA
Protein sequenceShow/hide protein sequence
MDSTRHGNYQSKDVKKPSSSSLTDTRLHKVGTSITSTRINKHGVRMPGSKSPSVSHNITHIALPSSEEVLVSHDGVFFHSEENVRLWKYVVHHRLIDEFEVSDQHHSCLV
IMDLIQKVGLSSAVSKISPLYPKLICGMIVNFSSSLNDPSSPDHFEIHVRGFGFDPSPLAINQFLGIVLPMDLSATYPSPDTLVYELTDGTITFSKISMEFESRDKISLN
CEKNSFELFL