; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012263 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012263
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr03:15684886..15685570
RNA-Seq ExpressionPI0012263
SyntenyPI0012263
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-1333.51Show/hide
Query:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------
        +S+ +S  P+    MEE+L DRL QRLI G+     D EKKYGIE+LKALGA  F G   P   E WL  +EKC RV  C E++KV              
Subjt:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------

Query:  ------------------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK
                                                        + FE GL+ EIRT  T       + KL+E ALR+EKSL + K+
Subjt:  ------------------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.8e-1434.78Show/hide
Query:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------
        +S+ +S  P     +EE+L DRL QRL+ G+     D EKKYG E+LKALGA  F+G   P   E WL  +EKC RV   LE++KV              
Subjt:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------

Query:  -----------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK
                                                 + FE GLR EIRT  TA      + KL+EVALR+EKSL + K+
Subjt:  -----------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK

KAA0056913.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.8e-1437.27Show/hide
Query:  MDSED---QSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV----------
        M+SE+   +S  P+    +EE+L DRL QR +  +     D EKK+ IE+LKALG+  F+    P   E WL  +EKC RVM C E++KV          
Subjt:  MDSED---QSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV----------

Query:  ------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK
                          + FE GLR +IRTL TA        KL++ ALR+EKSL + K+
Subjt:  ------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK

KGN46719.1 hypothetical protein Csa_020815 [Cucumis sativus]3.3e-1551.4Show/hide
Query:  LMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKVRHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLV
        L + LI+ LS++ EKK+GIE+LKAL A+EF+  +E EQ EKW+RTLEK  RV++C EE KV  F   L+ + +    AL  RC Y KL++VALR E+SL 
Subjt:  LMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKVRHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLV

Query:  KGKKAMT
         GK++ T
Subjt:  KGKKAMT

KGN61535.1 hypothetical protein Csa_006696 [Cucumis sativus]6.7e-1654.76Show/hide
Query:  MDSEDQSVNPYARRVMEEELSDRLMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV
        +DSE  ++NP ARR  EE L DR  QRLI+ L++  +K +GIE++KALGA EF+G+   E+ EKW+RTLEKC RVM+C +E++V
Subjt:  MDSEDQSVNPYARRVMEEELSDRLMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV

TrEMBL top hitse value%identityAlignment
A0A0A0KCZ4 Uncharacterized protein1.6e-1551.4Show/hide
Query:  LMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKVRHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLV
        L + LI+ LS++ EKK+GIE+LKAL A+EF+  +E EQ EKW+RTLEK  RV++C EE KV  F   L+ + +    AL  RC Y KL++VALR E+SL 
Subjt:  LMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKVRHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLV

Query:  KGKKAMT
         GK++ T
Subjt:  KGKKAMT

A0A0A0LI31 Uncharacterized protein3.2e-1654.76Show/hide
Query:  MDSEDQSVNPYARRVMEEELSDRLMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV
        +DSE  ++NP ARR  EE L DR  QRLI+ L++  +K +GIE++KALGA EF+G+   E+ EKW+RTLEKC RVM+C +E++V
Subjt:  MDSEDQSVNPYARRVMEEELSDRLMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV

A0A5A7T1M0 Reverse transcriptase1.4e-1434.78Show/hide
Query:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------
        +S+ +S  P     +EE+L DRL QRL+ G+     D EKKYG E+LKALGA  F+G   P   E WL  +EKC RV   LE++KV              
Subjt:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------

Query:  -----------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK
                                                 + FE GLR EIRT  TA      + KL+EVALR+EKSL + K+
Subjt:  -----------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK

A0A5A7ULX5 DNA/RNA polymerases superfamily protein2.3e-1437.27Show/hide
Query:  MDSED---QSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV----------
        M+SE+   +S  P+    +EE+L DRL QR +  +     D EKK+ IE+LKALG+  F+    P   E WL  +EKC RVM C E++KV          
Subjt:  MDSED---QSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV----------

Query:  ------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK
                          + FE GLR +IRTL TA        KL++ ALR+EKSL + K+
Subjt:  ------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK

A0A5D3DES5 DNA/RNA polymerases superfamily protein8.8e-1433.51Show/hide
Query:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------
        +S+ +S  P+    MEE+L DRL QRLI G+     D EKKYGIE+LKALGA  F G   P   E WL  +EKC RV  C E++KV              
Subjt:  DSEDQSVNPYARRVMEEELSDRLMQRLIDGL---SKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKV--------------

Query:  ------------------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK
                                                        + FE GL+ EIRT  T       + KL+E ALR+EKSL + K+
Subjt:  ------------------------------------------------RHFEAGLRSEIRTLATALVARCSYFKLIEVALRIEKSLVKGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGAGGATCAGTCGGTAAATCCATATGCTAGGAGAGTGATGGAAGAAGAATTATCTGATCGCCTGATGCAAAGATTGATAGATGGGTTGTCAAAAGATCAGGA
GAAGAAGTATGGAATAGAACAGCTCAAGGCGTTAGGAGCTAAAGAATTTTCAGGGGTAGTAGAACCTGAGCAGACGGAGAAATGGTTAAGAACGTTAGAGAAGTGTCTTA
GGGTAATGGAGTGCCTAGAAGAAAAGAAGGTGCGACATTTTGAAGCAGGATTAAGGAGTGAGATTCGGACACTAGCTACAGCTCTTGTTGCACGGTGTAGTTACTTTAAG
CTGATTGAGGTAGCATTGCGTATAGAGAAAAGTTTGGTAAAAGGGAAGAAGGCGATGACATCTACGTTTAGTGGAGAAGAGGAAAGAAAGAGTGTGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGAGGATCAGTCGGTAAATCCATATGCTAGGAGAGTGATGGAAGAAGAATTATCTGATCGCCTGATGCAAAGATTGATAGATGGGTTGTCAAAAGATCAGGA
GAAGAAGTATGGAATAGAACAGCTCAAGGCGTTAGGAGCTAAAGAATTTTCAGGGGTAGTAGAACCTGAGCAGACGGAGAAATGGTTAAGAACGTTAGAGAAGTGTCTTA
GGGTAATGGAGTGCCTAGAAGAAAAGAAGGTGCGACATTTTGAAGCAGGATTAAGGAGTGAGATTCGGACACTAGCTACAGCTCTTGTTGCACGGTGTAGTTACTTTAAG
CTGATTGAGGTAGCATTGCGTATAGAGAAAAGTTTGGTAAAAGGGAAGAAGGCGATGACATCTACGTTTAGTGGAGAAGAGGAAAGAAAGAGTGTGAATTAG
Protein sequenceShow/hide protein sequence
MDSEDQSVNPYARRVMEEELSDRLMQRLIDGLSKDQEKKYGIEQLKALGAKEFSGVVEPEQTEKWLRTLEKCLRVMECLEEKKVRHFEAGLRSEIRTLATALVARCSYFK
LIEVALRIEKSLVKGKKAMTSTFSGEEERKSVN