; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012272 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012272
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGamma-secretase subunit PEN-2
Genome locationchr11:30545811..30549240
RNA-Seq ExpressionPI0012272
SyntenyPI0012272
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040759.1 putative gamma-secretase subunit PEN-2 [Cucumis melo var. makuwa]2.4e-6896.24Show/hide
Query:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA
        METS NPNANTNS+PNTI+ PIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MAIISSWA
Subjt:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_008460893.1 PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo]8.9e-6378.88Show/hide
Query:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------
        METS NPNANTNS+PNTI+ PIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------

Query:  ---------IVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGV MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  ---------IVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_011649406.1 probable gamma-secretase subunit PEN-2 [Cucumis sativus]4.1e-6896.24Show/hide
Query:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA
        MET QNPNANTNS+PNTIS PI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA
Subjt:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]1.5e-6288.32Show/hide
Query:  METSQNPNANTNSSP----NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAII
        ME SQN N+N N +P    N +S PI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF VFMAII
Subjt:  METSQNPNANTNSSP----NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAII

Query:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_038900346.1 probable gamma-secretase subunit PEN-2 [Benincasa hispida]2.8e-6489.21Show/hide
Query:  METSQNPNANTNSSP------NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMA
        ME+SQNPN NTNS+P      N +S PI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMA
Subjt:  METSQNPNANTNSSP------NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMA

Query:  IISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        IISSWALTFSIGGERLFG VWDKLVMYNLAD+LGLTGWS
Subjt:  IISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

TrEMBL top hitse value%identityAlignment
A0A0A0LK38 Uncharacterized protein2.0e-6896.24Show/hide
Query:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA
        MET QNPNANTNS+PNTIS PI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA
Subjt:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A1S3CDI1 probable gamma-secretase subunit PEN-24.3e-6378.88Show/hide
Query:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------
        METS NPNANTNS+PNTI+ PIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP                    
Subjt:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY-------------------

Query:  ---------IVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
                 IVGSAIGFGV MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  ---------IVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A5A7THJ9 Putative gamma-secretase subunit PEN-21.2e-6896.24Show/hide
Query:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA
        METS NPNANTNS+PNTI+ PIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGV MAIISSWA
Subjt:  METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWA

Query:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  LTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-22.8e-6287.59Show/hide
Query:  METSQNPNANTNSSP----NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAII
        ME SQN N+N N +P    N +S PI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGF VFMAII
Subjt:  METSQNPNANTNSSP----NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAII

Query:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-27.3e-6388.32Show/hide
Query:  METSQNPNANTNSSP----NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAII
        ME SQN N+N N +P    N +S PI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF VFMAII
Subjt:  METSQNPNANTNSSP----NTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAII

Query:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

SwissProt top hitse value%identityAlignment
Q5G235 Gamma-secretase subunit PEN-23.8e-0835.48Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF +++ ++S+W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY

Q6QI68 Gamma-secretase subunit PEN-21.9e-0734.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF  ++ ++++W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY

Q9CQR7 Gamma-secretase subunit PEN-21.4e-0735.48Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF  ++ I+++W   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY

Q9FY84 Probable gamma-secretase subunit PEN-23.8e-4869.77Show/hide
Query:  SQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVFMAIISSWALT
        ++NPN N N +P +  +    +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V SAIGF VF A++S+WALT
Subjt:  SQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVFMAIISSWALT

Query:  FSIGGERLFGPVWDKLVMYNLADKLGLTG
        FSIGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  FSIGGERLFGPVWDKLVMYNLADKLGLTG

Q9NZ42 Gamma-secretase subunit PEN-28.5e-0835.48Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF  ++ +++SW   F I     + P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMY

Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).2.7e-4969.77Show/hide
Query:  SQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVFMAIISSWALT
        ++NPN N N +P +  +    +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V SAIGF VF A++S+WALT
Subjt:  SQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFGVFMAIISSWALT

Query:  FSIGGERLFGPVWDKLVMYNLADKLGLTG
        FSIGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  FSIGGERLFGPVWDKLVMYNLADKLGLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCTCGCAGAATCCAAACGCAAACACCAATTCCAGTCCTAATACCATATCGTTGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTCGGTTTGTCGGA
GGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCT
CGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTTCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATTGGAGGAGAACGCCTG
TTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGTTTAACAGGTTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
TAAATTTTGAAGTGAAGAAAAATTGAGTAAAAGAGAAAAAGGGAGAAGGAACAATTTAGCTTAAGAATTCGGTTTCTCAGAGTCATCAAAATCGTCTTGCAATGGAGACC
TCGCAGAATCCAAACGCAAACACCAATTCCAGTCCTAATACCATATCGTTGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTCGGTTTGTCGGAGGAAGAATC
GGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTC
GCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTTCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATTGGAGGAGAACGCCTGTTTGGACCT
GTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGTTTAACAGGTTGGAGCTAGTCTGGTTCCCTCCCTTCGGCAACCAACTTCAACCTTCTTGTATATTT
CAAAATGTTTAACTCTCTACTGTCATTATTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTCCAAGTGTTTCAATTGTCGAACATGAACATTTGCATTATA
TATGTTGATTCTTGTTAATAGTTGATGCACAAGTTTGAATCGGGTCTCCCTTCAACTGCGGACTAAGATTTGTGGATACAATTCTAAACCGGTTCTCTTGAAT
Protein sequenceShow/hide protein sequence
METSQNPNANTNSSPNTISLPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERL
FGPVWDKLVMYNLADKLGLTGWS