; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012277 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012277
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr11:15957636..15957917
RNA-Seq ExpressionPI0012277
SyntenyPI0012277
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]2.9e-2873.91Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR
        MPSY KFL DILAKK+RIND +T+AL QATSD++KNGV +KMT PGSF VP SI G+ LG  LC+L ASINLMPLSIFKKL+I EVQPT MR
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR

KAA0062402.1 uncharacterized protein E6C27_scaffold154G001950 [Cucumis melo var. makuwa]1.5e-2976.34Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL
        MPSYVKFLKDILAKK R+ND +TVALMQ TSDVF+NGVP+KMTDP SF +  SIG + LG  L +LEASINLMPL IFKKLE+GEVQPT MRL
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]2.4e-3076.4Show/hide
Query:  VKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL
        VKFLKDIL KK++IND + VAL QAT+++FKNGVPKKMTDPGSFT+PYSIG + LGRALC L A++NL+PLSIFKKL+IGEVQPT MRL
Subjt:  VKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]2.9e-2873.91Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR
        MPSY KFL DILAKK+RIND +T+AL QATSD++KNGV +KMT PGSF VP SI G+ LG  LC+L ASINLMPLSIFKKL+I EVQPT MR
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]1.0e-2875.27Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL
        MPSYVKFLKDILAKK R+ND +TVALMQ TSDVF+NGVP+KMTDP SF +  SIG + LG  L +L ASINLMPL IFKKLE+GEVQPT MRL
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900551.4e-2873.91Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR
        MPSY KFL DILAKK+RIND +T+AL QATSD++KNGV +KMT PGSF VP SI G+ LG  LC+L ASINLMPLSIFKKL+I EVQPT MR
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR

A0A1S4E2V6 uncharacterized protein LOC1079917234.8e-2975.27Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL
        MPSYVKFLKDILAKK R+ND +TVALMQ TSDVF+NGVP+KMTDP SF +  SIG + LG  L +L ASINLMPL IFKKLE+GEVQPT MRL
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL

A0A5A7V2G5 Uncharacterized protein7.5e-3076.34Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL
        MPSYVKFLKDILAKK R+ND +TVALMQ TSDVF+NGVP+KMTDP SF +  SIG + LG  L +LEASINLMPL IFKKLE+GEVQPT MRL
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL

A0A5D3BDT2 RT_RNaseH domain-containing protein1.4e-2873.91Show/hide
Query:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR
        MPSY KFL DILAKK+RIND +T+AL QATSD++KNGV +KMT PGSF VP SI G+ LG  LC+L ASINLMPLSIFKKL+I EVQPT MR
Subjt:  MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMR

A0A5D3BM69 Uncharacterized protein1.2e-3076.4Show/hide
Query:  VKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL
        VKFLKDIL KK++IND + VAL QAT+++FKNGVPKKMTDPGSFT+PYSIG + LGRALC L A++NL+PLSIFKKL+IGEVQPT MRL
Subjt:  VKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCATATGTCAAGTTCTTAAAAGACATCTTAGCAAAGAAGAAAAGGATAAATGATTGCGAGACAGTGGCTCTAATGCAGGCAACAAGTGACGTCTTCAAAAATGG
GGTACCCAAGAAGATGACAGATCCTGGTAGCTTTACGGTGCCTTATTCAATAGGTGGGGTGGGTTTAGGTCGTGCCCTATGCAACTTGGAAGCAAGCATTAATTTGATGC
CTCTATCTATCTTCAAGAAATTAGAGATAGGAGAGGTTCAACCAACATTCATGAGGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCATATGTCAAGTTCTTAAAAGACATCTTAGCAAAGAAGAAAAGGATAAATGATTGCGAGACAGTGGCTCTAATGCAGGCAACAAGTGACGTCTTCAAAAATGG
GGTACCCAAGAAGATGACAGATCCTGGTAGCTTTACGGTGCCTTATTCAATAGGTGGGGTGGGTTTAGGTCGTGCCCTATGCAACTTGGAAGCAAGCATTAATTTGATGC
CTCTATCTATCTTCAAGAAATTAGAGATAGGAGAGGTTCAACCAACATTCATGAGGCTCTAA
Protein sequenceShow/hide protein sequence
MPSYVKFLKDILAKKKRINDCETVALMQATSDVFKNGVPKKMTDPGSFTVPYSIGGVGLGRALCNLEASINLMPLSIFKKLEIGEVQPTFMRL