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PI0012289 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012289
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase, catalytic core
Genome locationchr11:7104773..7105330
RNA-Seq ExpressionPI0012289
SyntenyPI0012289
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.4e-0648.1Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        + NVFYV    L++K+   S   +  SA NFIVFG   VKVY +LKVSG  LME + +D IYVM  E  Y+NK +   T
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.8e-0648.1Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        + NVFYV      +K+   S   +  SADNF+VFG   VKVY +LKVSG  LME + +D IYVM  + AY+NK R   T
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

KAA0045163.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]3.1e-0764.15Show/hide
Query:  SADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        SA NF+VFGP  VKVY +LKVSG  LME Q +D IYVML E  YMNK R   T
Subjt:  SADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.6e-0650.67Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQR
        + NVFYV      +K+   S   +  SA NF+VFGP  VKVY +LKVSG  LME + +D IYVM  E AY+NK R
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQR

TYK22269.1 Integrase, catalytic core [Cucumis melo var. makuwa]4.5e-0648.1Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        + NVFYV    L++K+   S   +  SA NFIVFG   VKVY +LKVSG  LME + +D IYVM  E  Y+NK +   T
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

TrEMBL top hitse value%identityAlignment
A0A0A0K4U2 Uncharacterized protein2.5e-2360.36Show/hide
Query:  LKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRTKCVNFIGEQRHTRNVTVD-EAL-SRKTLKDERSF
        L  E+F       SA  F+VFGP GVKVYQDL+ SGKLLME QE+D IY+ML EDAYM+ QRH  T+C++   EQ HT N  +  +AL S KT KDERSF
Subjt:  LKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRTKCVNFIGEQRHTRNVTVD-EAL-SRKTLKDERSF

Query:  EEGSKDEVSQV
        EEGSKDE+S+V
Subjt:  EEGSKDEVSQV

A0A5A7ST06 Integrase, catalytic core1.7e-0648.1Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        + NVFYV    L++K+   S   +  SA NFIVFG   VKVY +LKVSG  LME + +D IYVM  E  Y+NK +   T
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

A0A5A7TNQ2 UBN2_3 domain-containing protein1.5e-0764.15Show/hide
Query:  SADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        SA NF+VFGP  VKVY +LKVSG  LME Q +D IYVML E  YMNK R   T
Subjt:  SADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

A0A5A7TYD2 Integrase, catalytic core1.3e-0650.67Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQR
        + NVFYV      +K+   S   +  SA NF+VFGP  VKVY +LKVSG  LME + +D IYVM  E AY+NK R
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQR

A0A5D3DG87 Integrase, catalytic core2.2e-0648.1Show/hide
Query:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT
        + NVFYV    L++K+   S   +  SA NFIVFG   VKVY +LKVSG  LME + +D IYVM  E  Y+NK +   T
Subjt:  MTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTATGCGATTTATGAATGATTTGATGACAAATGTGTTCTACGTGATGAATTTTACACTTGATTTAAAAAGAGAACGATTTTCTAGGCGATTTATAAAGGCATC
AGCAGACAACTTCATCGTGTTTGGACCTTATGGTGTCAAGGTCTACCAAGATTTGAAAGTCAGTGGCAAACTGTTGATGGAAGAACAAGAGATAGATTTCATCTATGTCA
TGTTAGTAGAAGACGCCTACATGAATAAGCAAAGGCACCCAAGGACAAAGTGCGTTAATTTCATTGGTGAACAACGTCATACAAGAAATGTTACAGTTGATGAAGCATTA
TCAAGGAAGACACTTAAGGATGAGAGATCTTTTGAAGAAGGATCCAAAGATGAGGTAAGTCAAGTGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTATGCGATTTATGAATGATTTGATGACAAATGTGTTCTACGTGATGAATTTTACACTTGATTTAAAAAGAGAACGATTTTCTAGGCGATTTATAAAGGCATC
AGCAGACAACTTCATCGTGTTTGGACCTTATGGTGTCAAGGTCTACCAAGATTTGAAAGTCAGTGGCAAACTGTTGATGGAAGAACAAGAGATAGATTTCATCTATGTCA
TGTTAGTAGAAGACGCCTACATGAATAAGCAAAGGCACCCAAGGACAAAGTGCGTTAATTTCATTGGTGAACAACGTCATACAAGAAATGTTACAGTTGATGAAGCATTA
TCAAGGAAGACACTTAAGGATGAGAGATCTTTTGAAGAAGGATCCAAAGATGAGGTAAGTCAAGTGCAATAG
Protein sequenceShow/hide protein sequence
MISMRFMNDLMTNVFYVMNFTLDLKRERFSRRFIKASADNFIVFGPYGVKVYQDLKVSGKLLMEEQEIDFIYVMLVEDAYMNKQRHPRTKCVNFIGEQRHTRNVTVDEAL
SRKTLKDERSFEEGSKDEVSQVQ