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PI0012295 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012295
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr11:19498111..19502395
RNA-Seq ExpressionPI0012295
SyntenyPI0012295
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]3.9e-5556.28Show/hide
Query:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI
        M SY KFL DILAKKRRIND +T+AL QATSD++KNGV +KMT P SF V CS+  MDLG  LCDLGASINLMPLSIFKKLK+ EVQPTH+R Q ADRSI
Subjt:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI

Query:  VKPKGKIEDVLVKEKAYNELFSAE----EFFEDEDLSSILK----------------ELNVVSSKRKFE-------SLDLQTKDKKKTKPLIEEPPELEL
          PKGKIEDVLVK   +  LF A+    ++  DE++  IL+                EL V  + ++ +          L  + +K TKP + EP ELEL
Subjt:  VKPKGKIEDVLVKEKAYNELFSAE----EFFEDEDLSSILK----------------ELNVVSSKRKFE-------SLDLQTKDKKKTKPLIEEPPELEL

Query:  KPLPNHLKYAYLGEDDTMSVIISAHLNVAEE
        KPLPNHLKY YLGE+DT+  IIS HLN  EE
Subjt:  KPLPNHLKYAYLGEDDTMSVIISAHLNVAEE

KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]1.0e-5057.55Show/hide
Query:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI
        M+SYVKFL DILAKK RIND ET+ALTQAT D+FKNGV +KM DP+SF++  S+G MDLGR LCDL ASIN M LSIF KL++ E  PT      A  S 
Subjt:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI

Query:  VKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSV---IISA
              +     +E+ Y+ELF+ EEFFE+EDLS ILKE+N+VS +R FESLDLQTK KKKTKP IEEPP+LELK LPNHLK    G++DT+     +  A
Subjt:  VKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSV---IISA

Query:  HLNVAEERVSSW
           V ++ +  W
Subjt:  HLNVAEERVSSW

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]2.9e-5864.25Show/hide
Query:  ATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDV----------------LV
        ATSD+FKNG+P+KMT+P SF V CS+GEMDLGR LC+L  SINLM LSIFKKL++ EVQPTHIRL FAD+ I KP+ KI+D                   
Subjt:  ATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDV----------------LV

Query:  KEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEER
        +++AY ELFS EEFFE++D S ILKE+NVVSS++KFESLDLQ K +KKTKP IEEPPELELK LPNHLKY YL E+DT+ V IS HL+VA+E+
Subjt:  KEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEER

TYJ96947.1 integrase [Cucumis melo var. makuwa]1.1e-5459.81Show/hide
Query:  MTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNV
        MTD  SFMVSCS+G M LGR+LCDLGASINLMPLSIFKK K+GEVQPTH+RLQFADRSI K K KI+D    E++Y +LF+AE+F E+++ + IL+E+NV
Subjt:  MTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNV

Query:  VSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEERV-----------SSW-------------------KR
        VS ++KFESLDLQTK +KKTK  IEEPPELELKP  NHLKYAYLG +DT+S+IIS HL+  EE+V           + W                   KR
Subjt:  VSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEERV-----------SSW-------------------KR

Query:  VKRAPFSFR
        VKRAPFS +
Subjt:  VKRAPFSFR

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]4.8e-6163.5Show/hide
Query:  VKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPK
        VKFL DIL KKR+IND + VALTQAT+++FKNGVPKKMTDP SF +  S+G +DLGR LC+L A++NL+PLSIFKKLK+GEVQPTH+RLQ  D       
Subjt:  VKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPK

Query:  GKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEE
               + E+AY ELFS EEF E+++    L+E+N    KRKFE LDLQTKD+KK KP I+EP ELELKPLPNHLKYAYLGE+DT+ +IISAHL+ A+E
Subjt:  GKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEE

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein4.8e-5157.55Show/hide
Query:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI
        M+SYVKFL DILAKK RIND ET+ALTQAT D+FKNGV +KM DP+SF++  S+G MDLGR LCDL ASIN M LSIF KL++ E  PT      A  S 
Subjt:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI

Query:  VKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSV---IISA
              +     +E+ Y+ELF+ EEFFE+EDLS ILKE+N+VS +R FESLDLQTK KKKTKP IEEPP+LELK LPNHLK    G++DT+     +  A
Subjt:  VKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSV---IISA

Query:  HLNVAEERVSSW
           V ++ +  W
Subjt:  HLNVAEERVSSW

A0A5A7UF79 Uncharacterized protein1.4e-5864.25Show/hide
Query:  ATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDV----------------LV
        ATSD+FKNG+P+KMT+P SF V CS+GEMDLGR LC+L  SINLM LSIFKKL++ EVQPTHIRL FAD+ I KP+ KI+D                   
Subjt:  ATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDV----------------LV

Query:  KEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEER
        +++AY ELFS EEFFE++D S ILKE+NVVSS++KFESLDLQ K +KKTKP IEEPPELELK LPNHLKY YL E+DT+ V IS HL+VA+E+
Subjt:  KEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEER

A0A5D3BCU9 Integrase5.5e-5559.81Show/hide
Query:  MTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNV
        MTD  SFMVSCS+G M LGR+LCDLGASINLMPLSIFKK K+GEVQPTH+RLQFADRSI K K KI+D    E++Y +LF+AE+F E+++ + IL+E+NV
Subjt:  MTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNV

Query:  VSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEERV-----------SSW-------------------KR
        VS ++KFESLDLQTK +KKTK  IEEPPELELKP  NHLKYAYLG +DT+S+IIS HL+  EE+V           + W                   KR
Subjt:  VSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEERV-----------SSW-------------------KR

Query:  VKRAPFSFR
        VKRAPFS +
Subjt:  VKRAPFSFR

A0A5D3BDT2 RT_RNaseH domain-containing protein1.9e-5556.28Show/hide
Query:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI
        M SY KFL DILAKKRRIND +T+AL QATSD++KNGV +KMT P SF V CS+  MDLG  LCDLGASINLMPLSIFKKLK+ EVQPTH+R Q ADRSI
Subjt:  MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSI

Query:  VKPKGKIEDVLVKEKAYNELFSAE----EFFEDEDLSSILK----------------ELNVVSSKRKFE-------SLDLQTKDKKKTKPLIEEPPELEL
          PKGKIEDVLVK   +  LF A+    ++  DE++  IL+                EL V  + ++ +          L  + +K TKP + EP ELEL
Subjt:  VKPKGKIEDVLVKEKAYNELFSAE----EFFEDEDLSSILK----------------ELNVVSSKRKFE-------SLDLQTKDKKKTKPLIEEPPELEL

Query:  KPLPNHLKYAYLGEDDTMSVIISAHLNVAEE
        KPLPNHLKY YLGE+DT+  IIS HLN  EE
Subjt:  KPLPNHLKYAYLGEDDTMSVIISAHLNVAEE

A0A5D3BM69 Uncharacterized protein2.3e-6163.5Show/hide
Query:  VKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPK
        VKFL DIL KKR+IND + VALTQAT+++FKNGVPKKMTDP SF +  S+G +DLGR LC+L A++NL+PLSIFKKLK+GEVQPTH+RLQ  D       
Subjt:  VKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPK

Query:  GKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEE
               + E+AY ELFS EEF E+++    L+E+N    KRKFE LDLQTKD+KK KP I+EP ELELKPLPNHLKYAYLGE+DT+ +IISAHL+ A+E
Subjt:  GKIEDVLVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTATGTCAAGTTCTTGAATGATATCTTGGCGAAGAAAAGAAGGATAAATGATTGCGAGACAGTGGCTCTAACACAAGCAACAAGCGACGTCTTCAAAAATGG
GGTACCCAAGAAGATGACAGACCCTGATAGCTTTATGGTATCTTGTTCGGTAGGCGAAATGGATCTGGGTCGTACGTTATGCGACCTTGGGGCGAGCATCAATTTGATGC
CTCTTTCTATCTTCAAAAAATTAAAGATGGGGGAGGTTCAACCAACTCACATAAGGCTTCAATTTGCTGATAGATCTATTGTTAAGCCTAAGGGCAAAATTGAAGATGTT
TTGGTTAAGGAAAAAGCGTATAATGAACTGTTTAGTGCTGAAGAATTCTTTGAAGATGAAGACCTAAGTTCTATACTAAAAGAATTGAACGTCGTGTCTAGCAAAAGGAA
GTTTGAATCTTTGGATCTGCAAACCAAAGATAAGAAGAAGACAAAGCCATTAATTGAAGAACCACCAGAGCTAGAGCTCAAGCCTTTACCCAACCACCTAAAGTATGCAT
ATTTGGGGGAGGATGACACCATGTCCGTCATTATCTCCGCCCACTTGAATGTCGCAGAAGAGAGGGTATCAAGTTGGAAGAGGGTCAAGAGGGCACCATTCAGTTTTAGA
GACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTATGTCAAGTTCTTGAATGATATCTTGGCGAAGAAAAGAAGGATAAATGATTGCGAGACAGTGGCTCTAACACAAGCAACAAGCGACGTCTTCAAAAATGG
GGTACCCAAGAAGATGACAGACCCTGATAGCTTTATGGTATCTTGTTCGGTAGGCGAAATGGATCTGGGTCGTACGTTATGCGACCTTGGGGCGAGCATCAATTTGATGC
CTCTTTCTATCTTCAAAAAATTAAAGATGGGGGAGGTTCAACCAACTCACATAAGGCTTCAATTTGCTGATAGATCTATTGTTAAGCCTAAGGGCAAAATTGAAGATGTT
TTGGTTAAGGAAAAAGCGTATAATGAACTGTTTAGTGCTGAAGAATTCTTTGAAGATGAAGACCTAAGTTCTATACTAAAAGAATTGAACGTCGTGTCTAGCAAAAGGAA
GTTTGAATCTTTGGATCTGCAAACCAAAGATAAGAAGAAGACAAAGCCATTAATTGAAGAACCACCAGAGCTAGAGCTCAAGCCTTTACCCAACCACCTAAAGTATGCAT
ATTTGGGGGAGGATGACACCATGTCCGTCATTATCTCCGCCCACTTGAATGTCGCAGAAGAGAGGGTATCAAGTTGGAAGAGGGTCAAGAGGGCACCATTCAGTTTTAGA
GACGATTAA
Protein sequenceShow/hide protein sequence
MASYVKFLNDILAKKRRINDCETVALTQATSDVFKNGVPKKMTDPDSFMVSCSVGEMDLGRTLCDLGASINLMPLSIFKKLKMGEVQPTHIRLQFADRSIVKPKGKIEDV
LVKEKAYNELFSAEEFFEDEDLSSILKELNVVSSKRKFESLDLQTKDKKKTKPLIEEPPELELKPLPNHLKYAYLGEDDTMSVIISAHLNVAEERVSSWKRVKRAPFSFR
DD