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PI0012324 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012324
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:16738505..16749094
RNA-Seq ExpressionPI0012324
SyntenyPI0012324
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]5.0e-0960.76Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA
        +TTLLNELQTF+S MK KGQK GEANVA S ++F +GS+SGTKS PSSSG+KK +KKKGG+G K  L+++ + ++   A
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-0960.76Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA
        +TTLLNELQTF+S MK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G K  L+++ + ++   A
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA

KAA0045186.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-0962.5Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSS-SSARRHSIAHL
        MTTLL ELQTF S    KGQKEGEANVAHSKRF          APSSSG+KKIQKKKGGKGK L +++ +  R  S  HL
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSS-SSARRHSIAHL

KAA0058447.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-1062.03Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA
        +TTLLNELQTF+S MK KGQK GEANVA S ++F KGS+SGTKS PSSSG KK++KKKGG+G K  L+++ + ++   A
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA

KAA0067441.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-0957.83Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSSSSARRHSIAHLLRKL
        MTTLL ELQTFQS    KGQKEGEANVA+SKRF           PSSSG+KKIQKKKGGKGKD ++++   R+      L++L
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSSSSARRHSIAHLLRKL

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.2e-0960.76Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA
        +TTLLNELQTF+S MK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G K  L+++ + ++   A
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA

A0A5A7SMN4 Gag/pol protein2.4e-0960.76Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA
        +TTLLNELQTF+S MK KGQK GEANVA S ++F +GS+SGTKS PSSSG+KK +KKKGG+G K  L+++ + ++   A
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA

A0A5A7UUN7 Gag/pol protein3.8e-1062.03Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA
        +TTLLNELQTF+S MK KGQK GEANVA S ++F KGS+SGTKS PSSSG KK++KKKGG+G K  L+++ + ++   A
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG-KDLLSSSSSARRHSIA

A0A5A7VPE8 Gag/pol protein4.9e-1057.83Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSSSSARRHSIAHLLRKL
        MTTLL ELQTFQS    KGQKEGEANVA+SKRF           PSSSG+KKIQKKKGGKGKD ++++   R+      L++L
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSSSSARRHSIAHLLRKL

A0A5D3DUH7 Gag/pol protein1.1e-0962.5Show/hide
Query:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSS-SSARRHSIAHL
        MTTLL ELQTF S    KGQKEGEANVAHSKRF          APSSSG+KKIQKKKGGKGK L +++ +  R  S  HL
Subjt:  MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSS-SSARRHSIAHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCCTCCTTAACGAGTTGCAGACTTTTCAGTCTTTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGTTTCAGAAGGGTTC
ATCCTCTGGAACCAAGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAGGGGAAAGATCTGTTGTCGTCGTCCTCGTCTGCTCGTCGTC
ACAGCATCGCGCATCTCCTTCGAAAGCTGAGCGTCGTCCAGCAGTCACGCGAAGTTCCGTGGATCTATCCGTGCATCTTCTCTGACCCGTTCAACTCAGTGCTATCCGCT
TGTCTCCGTCCAACCGAGTTCACGTCGTGCCAAGCCTTCTTCGTCCAGTCTTCGTTCAGATCCGTGCCGCCCAACCGTCTAGCTGTTGAGTCTATCTGTTTCGCGCGCCA
TCCGTCCAAGCTGAGCCACGCCCGAGCCGTTTTGTTCGATACTCCTTTTCCAGCCGTGTTGAACCTTCTTCCTAGCCTTCAAGCCAATTCTTGGTATGTTTTTGGTCTCG
TTGAAGATAATCGCTCAAGATCTTTGGGTTCTAGGCGTCTTTGGTTTTTGGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACCCTCCTTAACGAGTTGCAGACTTTTCAGTCTTTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGTTTCAGAAGGGTTC
ATCCTCTGGAACCAAGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAGGGGAAAGATCTGTTGTCGTCGTCCTCGTCTGCTCGTCGTC
ACAGCATCGCGCATCTCCTTCGAAAGCTGAGCGTCGTCCAGCAGTCACGCGAAGTTCCGTGGATCTATCCGTGCATCTTCTCTGACCCGTTCAACTCAGTGCTATCCGCT
TGTCTCCGTCCAACCGAGTTCACGTCGTGCCAAGCCTTCTTCGTCCAGTCTTCGTTCAGATCCGTGCCGCCCAACCGTCTAGCTGTTGAGTCTATCTGTTTCGCGCGCCA
TCCGTCCAAGCTGAGCCACGCCCGAGCCGTTTTGTTCGATACTCCTTTTCCAGCCGTGTTGAACCTTCTTCCTAGCCTTCAAGCCAATTCTTGGTATGTTTTTGGTCTCG
TTGAAGATAATCGCTCAAGATCTTTGGGTTCTAGGCGTCTTTGGTTTTTGGAGAAGTAG
Protein sequenceShow/hide protein sequence
MTTLLNELQTFQSFMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDLLSSSSSARRHSIAHLLRKLSVVQQSREVPWIYPCIFSDPFNSVLSA
CLRPTEFTSCQAFFVQSSFRSVPPNRLAVESICFARHPSKLSHARAVLFDTPFPAVLNLLPSLQANSWYVFGLVEDNRSRSLGSRRLWFLEK