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PI0012336 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012336
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionComplex 1 LYR protein
Genome locationchr03:4918208..4918684
RNA-Seq ExpressionPI0012336
SyntenyPI0012336
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016900070.1 PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]2.0e-7493.04Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MTMRLVGKYLN SSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEKS DD+ DKLITQRRLTSTRREALSLYRDILRATRFFMW DS+GVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL
        VL QNARKEFEDARFESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRDQL
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL

XP_022144304.1 uncharacterized protein LOC111014019 [Momordica charantia]1.9e-6785.35Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MT+RLVGK LN  SIHK+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEKSF+DEDD+LITQR LTSTRREALSLYRDI+RATRFFMW DSRGVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ
        VL +NARKEFE+AR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]8.3e-6884.71Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        M+MRLV K +  S+ HKNFL C+K+GFHPR+LHNGPDT++ELLDRHVVKKEKSFDD++++LITQRRLTSTRREALSLYRDILRATRFFMW DSRGVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ
        VL QNARKEFEDARFE+DPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRD+
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]9.8e-7794.94Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MTMRLVGKYLN SSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEK FDDEDDKLITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL
        VL +NARKEFEDAR ESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQ GRDQL
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]1.1e-7090.38Show/hide
Query:  MRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRDVL
        MRLVGK LN  SIHKNFLTC+KIGFHPRVLHNGPDTV ELLDRHVVKKEKSFDDE+D+LITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRDVL
Subjt:  MRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRDVL

Query:  SQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL
         QNARKEFEDAR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ+GRDQL
Subjt:  SQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein4.8e-7794.94Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MTMRLVGKYLN SSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEK FDDEDDKLITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL
        VL +NARKEFEDAR ESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQ GRDQL
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL

A0A1S4DWJ1 uncharacterized protein LOC1034885699.9e-7593.04Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MTMRLVGKYLN SSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEKS DD+ DKLITQRRLTSTRREALSLYRDILRATRFFMW DS+GVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL
        VL QNARKEFEDARFESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRDQL
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL

A0A5A7VCD6 Complex 1 LYR protein9.9e-7593.04Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MTMRLVGKYLN SSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEKS DD+ DKLITQRRLTSTRREALSLYRDILRATRFFMW DS+GVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL
        VL QNARKEFEDARFESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRDQL
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL

A0A6J1CRY1 uncharacterized protein LOC1110140199.0e-6885.35Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        MT+RLVGK LN  SIHK+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEKSF+DEDD+LITQR LTSTRREALSLYRDI+RATRFFMW DSRGVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ
        VL +NARKEFE+AR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ

A0A6J1HEL0 uncharacterized protein LOC1114623394.0e-6884.71Show/hide
Query:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD
        M+MRLV K +  S+ HKNFL C+K+GFHPR+LHNGPDT++ELLDRHVVKKEKSFDD++++LITQRRLTSTRREALSLYRDILRATRFFMW DSRGVLWRD
Subjt:  MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRD

Query:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ
        VL QNARKEFEDARFE+DPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQSGRD+
Subjt:  VLSQNARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein2.5e-4674.6Show/hide
Query:  RVLHNGPDTVEELLDRHVVKKEKSFDDEDD-KLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRDVLSQNARKEFEDARFESDPEMVTRLLIG
        R LH GPDTVEELL+RH+ KKEK   D D+ + + +RRLTSTRREALSLYRDILRATRFF W DSRG LWRDVL +NARKEFE ARFE+DPE++TRLLIG
Subjt:  RVLHNGPDTVEELLDRHVVKKEKSFDDEDD-KLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRDVLSQNARKEFEDARFESDPEMVTRLLIG

Query:  GRDAVQSALDKLAEKQREEIDKKQSG
        G DAV SALDKLAEKQRE I+K++ G
Subjt:  GRDAVQSALDKLAEKQREEIDKKQSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGAGGTTGGTTGGAAAATATCTTAATCCGTCGTCAATTCATAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCTGA
CACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGCCTCACCAGCACTCGACGTGAGG
CTCTAAGCCTCTATAGAGACATTCTACGGGCAACTCGATTCTTTATGTGGTCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGTCAGAACGCACGGAAGGAGTTT
GAGGATGCACGCTTTGAATCTGATCCAGAAATGGTGACCCGACTTTTGATTGGTGGGCGCGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGA
GATTGATAAAAAACAAAGTGGTCGAGATCAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATGAGGTTGGTTGGAAAATATCTTAATCCGTCGTCAATTCATAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGTCCTGA
CACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTCCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGCCTCACCAGCACTCGACGTGAGG
CTCTAAGCCTCTATAGAGACATTCTACGGGCAACTCGATTCTTTATGTGGTCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCAGTCAGAACGCACGGAAGGAGTTT
GAGGATGCACGCTTTGAATCTGATCCAGAAATGGTGACCCGACTTTTGATTGGTGGGCGCGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGA
GATTGATAAAAAACAAAGTGGTCGAGATCAACTCTGA
Protein sequenceShow/hide protein sequence
MTMRLVGKYLNPSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSFDDEDDKLITQRRLTSTRREALSLYRDILRATRFFMWSDSRGVLWRDVLSQNARKEF
EDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQSGRDQL