CuGenDBv2

Gene ID	PI0012365
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Spindle pole body-associated protein
Genome location	chr05:20203436..20206255
RNA-Seq Expression	PI0012365
Synteny	PI0012365
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140096.1 uncharacterized protein LOC101202761 [Cucumis sativus]

3.1e-81

94.05

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MGAVS FL +SLR Y FPSSTQTLLSN AASSQLLSFTP CTKFRSKTLVFGKQSG+DNDSQFLDENGVV+DMDGYLNYHSFEYDSVWDTKP+WCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

XP_008449434.1 PREDICTED: uncharacterized protein LOC103491324 isoform X1 [Cucumis melo]

1.8e-81

94.05

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MGA+SL L TSL  YHFPSSTQTLLSN AASSQLLSFTPKCTKFR+KTLVFGKQS  DNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTGLLVIASSWVAIKS+AVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]

4.1e-73

83.93

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG VSLFL TSLR +HFP STQTLLSN AASSQ++SFTPKCT+FR K++VFGKQS ++++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTG LVIASSW+ IKSIAVTAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]

6.3e-74

84.52

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG VSLFL TSLR +HFP STQTLLSN AASSQ++SFTPKCT+FR K++VFGKQS ++++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTGLLVIASSW+ IKSIAVTAV+LTLIC WWYIFLYSYPKAY++MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

XP_038887717.1 uncharacterized protein LOC120077773 [Benincasa hispida]

7.5e-75

86.83

Show/hide

Query:  GAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        GA+SLFLPTSLR +H PSSTQTLLSN  ASSQLLSFTP  TKFR+KT+VF  QSG +NDSQFLDENGVV+DMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  GAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        LTGLLV +SSWV IKS AVTAVI +LICLWWYIFLYSYPKAYSEMIAERRRKVSDG+EDTFGVKRTQ
Subjt:  LTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KED9 Uncharacterized protein

1.5e-81

94.05

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MGAVS FL +SLR Y FPSSTQTLLSN AASSQLLSFTP CTKFRSKTLVFGKQSG+DNDSQFLDENGVV+DMDGYLNYHSFEYDSVWDTKP+WCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X1

8.9e-82

94.05

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MGA+SL L TSL  YHFPSSTQTLLSN AASSQLLSFTPKCTKFR+KTLVFGKQS  DNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTGLLVIASSWVAIKS+AVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

A0A5D3CTE0 Uncharacterized protein

2.0e-73

92.31

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MGA+SL L TSL  YHFPSSTQTLLSN AASSQLLSFTPKCTKFR+KTLVFGKQS  DNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSD
        TLTGLLVIASSWVAIKS+AVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRK  D
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSD

A0A6J1HI50 uncharacterized protein LOC111463803

1.3e-72

82.74

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG VSLFL TSLR +HFP STQTLLSN AASSQ +SFTPKCT+FR K++VFGKQS ++++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWT+
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTG LVIASSW+ IKSIAVTAV+L LIC WWYIFLYSYPKAY++MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

A0A6J1HWP2 uncharacterized protein LOC111466970

2.0e-73

83.93

Show/hide

Query:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG VSLFL TSLR +HFP STQTLLSN AASSQ++SFTPKCT+FR K++VFGKQS ++++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ
        TLTG LVIASSW+ IKSIAVTAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02725.1 unknown protein

4.4e-41

55.1

Show/hide

Query:  FPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGLLVIASSWVAIK
        F   T+ LLS  +  + L SF  K  +  +K   FG    +  DS+F+DE GVVDDM+G+L+  S EYDSVWDTKPSWCQPWTI LTGL ++A SWV + 
Subjt:  FPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGLLVIASSWVAIK

Query:  SIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFG
        S+ V+++ + +I  WWYIFLYSYPK+YSEMIAERR++V+DG ED +G
Subjt:  SIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFG

AT4G02725.2 unknown protein

5.4e-31

52.8

Show/hide

Query:  FPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGLLVIASSWVAIK
        F   T+ LLS  +  + L SF  K  +  +K   FG    +  DS+F+DE GVVDDM+G+L+  S EYDSVWDTKPSWCQPWTI LTGL ++A SWV + 
Subjt:  FPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGLLVIASSWVAIK

Query:  SIAVTAVILTLICLWWYIFLYSYPK
        S+ V+++ + +I  WWYIFLYSYPK
Subjt:  SIAVTAVILTLICLWWYIFLYSYPK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAGCCGTTTCTCTATTCCTTCCAACTTCTCTACGATTCTACCATTTTCCTTCTTCAACACAAACCCTTCTTTCTAACTCCGCTGCTTCTTCACAACTCCTTTCTTT
TACTCCCAAATGCACAAAATTCCGCAGCAAAACTTTGGTTTTTGGGAAGCAATCAGGCGACGATAATGATTCTCAGTTTCTAGATGAAAATGGGGTCGTCGATGATATGG
ATGGATACTTGAATTACCACTCTTTCGAATATGACTCCGTCTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATTACTAGTGATTGCTTCT
AGCTGGGTTGCTATAAAGTCGATAGCAGTGACCGCAGTCATACTCACATTAATATGCTTATGGTGGTACATCTTTCTCTACTCATATCCAAAGGCTTATTCTGAGATGAT
TGCAGAACGAAGAAGAAAAGTTAGTGATGGACTAGAAGACACATTTGGTGTGAAAAGGACACAATGA

mRNA sequence

Show/hide mRNA sequence

GTGCATCATATTTCGTGGGCCATGAATTTTATCCTGTGTTAAGCTAACTGGAAGTCCCCAATGGCAACTTCCGCGGCTCAGCTACATGCCTCCATAGTCCATAATCACCA
CACTACTTGAAAGTTGTAATACAAAAACCCAATTCTATGGGAGCCGTTTCTCTATTCCTTCCAACTTCTCTACGATTCTACCATTTTCCTTCTTCAACACAAACCCTTCT
TTCTAACTCCGCTGCTTCTTCACAACTCCTTTCTTTTACTCCCAAATGCACAAAATTCCGCAGCAAAACTTTGGTTTTTGGGAAGCAATCAGGCGACGATAATGATTCTC
AGTTTCTAGATGAAAATGGGGTCGTCGATGATATGGATGGATACTTGAATTACCACTCTTTCGAATATGACTCCGTCTGGGATACAAAGCCTTCTTGGTGTCAACCATGG
ACTATAACACTGACAGGATTACTAGTGATTGCTTCTAGCTGGGTTGCTATAAAGTCGATAGCAGTGACCGCAGTCATACTCACATTAATATGCTTATGGTGGTACATCTT
TCTCTACTCATATCCAAAGGCTTATTCTGAGATGATTGCAGAACGAAGAAGAAAAGTTAGTGATGGACTAGAAGACACATTTGGTGTGAAAAGGACACAATGA

Protein sequence

Show/hide protein sequence

MGAVSLFLPTSLRFYHFPSSTQTLLSNSAASSQLLSFTPKCTKFRSKTLVFGKQSGDDNDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGLLVIAS
SWVAIKSIAVTAVILTLICLWWYIFLYSYPKAYSEMIAERRRKVSDGLEDTFGVKRTQ

PI0012365 (gene) of Melon (PI 482460) v1 genome