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PI0012366 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012366
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:1438315..1438710
RNA-Seq ExpressionPI0012366
SyntenyPI0012366
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.6e-4873.44Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TLSELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSSAIPPPSQ +LPKNRG N+GGK+I L+EAMA   + EVKEH+++SDSS+SDRHW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKA+ SGD    RG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]3.8e-5075Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TLSELYLP RSLEP KHVT RF +WW TKHGTYFEDN+HHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMA   + EVKEH+++SDSS+SDRHW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.2e-4975Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TLSELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSSAIPP SQP+LPKNRGSN+GGK+I L+EAMA   + EVKE +++SDSS+SDRHW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]2.7e-4874.42Show/hide
Query:  MRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRH
        MRR TLSELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSSAIPPPSQP+LPKNRGSN+GGK+I L+EAMA   + EV EH  +SDS++SDRH
Subjt:  MRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRH

Query:  WKRPLKKAKASGDDSCGRGSTAMEIPNVP
        WKRPLKK K SGD   GRG +A+E+P+VP
Subjt:  WKRPLKKAKASGDDSCGRGSTAMEIPNVP

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]1.4e-4774.22Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TL ELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMA   + EVKEH  +SDSS+SD HW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.7e-4873.44Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TLSELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSSAIPPPSQ +LPKNRG N+GGK+I L+EAMA   + EVKEH+++SDSS+SDRHW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKA+ SGD    RG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7SQC9 PMD domain-containing protein1.9e-5075Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TLSELYLP RSLEP KHVT RF +WW TKHGTYFEDN+HHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMA   + EVKEH+++SDSS+SDRHW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7TX42 Uncharacterized protein1.6e-4975Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TLSELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSSAIPP SQP+LPKNRGSN+GGK+I L+EAMA   + EVKE +++SDSS+SDRHW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5A7UVI5 PMD domain-containing protein1.3e-4874.42Show/hide
Query:  MRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRH
        MRR TLSELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSSAIPPPSQP+LPKNRGSN+GGK+I L+EAMA   + EV EH  +SDS++SDRH
Subjt:  MRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRH

Query:  WKRPLKKAKASGDDSCGRGSTAMEIPNVP
        WKRPLKK K SGD   GRG +A+E+P+VP
Subjt:  WKRPLKKAKASGDDSCGRGSTAMEIPNVP

A0A5D3D7V4 PMD domain-containing protein6.6e-4874.22Show/hide
Query:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW
        RR TL ELYLPARSLEP KHVT RF +WW TKHGTYFEDN+HHLVSS IPPPSQP+LPKNRGSN+GGK+I L+EAMA   + EVKEH  +SDSS+SD HW
Subjt:  RRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHW

Query:  KRPLKKAKASGDDSCGRGSTAMEIPNVP
        KRPLKKAK SGD   GRG +A+E+P+VP
Subjt:  KRPLKKAKASGDDSCGRGSTAMEIPNVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGCGGAACCTTATCTGAGTTATATTTGCCTGCCCGTTCATTAGAGCCTAGCAAGCATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGGGACCTA
TTTTGAGGATAATAAACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAACTGCCAAAGAATCGAGGAAGCAATGTAGGCGGCAAACAGATCCACTTGA
TTGAGGCAATGGCTCTTACCCACGATAGAGAGGTTAAGGAACACAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGCA
TCGGGCGATGATTCATGTGGAAGAGGTTCAACTGCCATGGAAATTCCTAACGTTCCAACACCATTG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGCGGAACCTTATCTGAGTTATATTTGCCTGCCCGTTCATTAGAGCCTAGCAAGCATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGGGACCTA
TTTTGAGGATAATAAACACCATTTGGTGAGCAGTGCCATTCCTCCCCCGTCACAACCCAAACTGCCAAAGAATCGAGGAAGCAATGTAGGCGGCAAACAGATCCACTTGA
TTGAGGCAATGGCTCTTACCCACGATAGAGAGGTTAAGGAACACAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGCA
TCGGGCGATGATTCATGTGGAAGAGGTTCAACTGCCATGGAAATTCCTAACGTTCCAACACCATTG
Protein sequenceShow/hide protein sequence
MRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFEDNKHHLVSSAIPPPSQPKLPKNRGSNVGGKQIHLIEAMALTHDREVKEHREQSDSSRSDRHWKRPLKKAKA
SGDDSCGRGSTAMEIPNVPTPL