CuGenDBv2

Gene ID	PI0012430
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Vacuolar sorting-associated protein 62
Genome location	chr11:1147683..1150992
RNA-Seq Expression	PI0012430
Synteny	PI0012430
Gene Ontology terms	NA
InterPro domains	IPR014807 - Cytochrome c oxidase assembly factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039892.1 Vacuolar sorting-associated protein 62 [Cucumis melo var. makuwa]

9.2e-98

95.77

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Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKPS NEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKAR+NQAV DAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDIL+MDALLYVPENEGK+KTLRINLTEKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

XP_004140577.1 uncharacterized protein LOC101206927 [Cucumis sativus]

1.1e-98

95.77

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Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFASIFKRSSTPHASSNSIKP+ NEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEK R+NQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDIL+MDALLYVPENEGK+KTLRINL+EKFAPAACVSCTDCQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

XP_008459968.1 PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo]

9.2e-98

95.77

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKPS NEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKAR+NQAV DAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDIL+MDALLYVPENEGK+KTLRINLTEKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

XP_038876218.1 uncharacterized protein LOC120068500 isoform X1 [Benincasa hispida]

4.3e-95

93.12

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Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS  PHASS+SIKPS + VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKAR+NQAVIDAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALL+VP NEGK+KT+RINLTEKFAPAACVSCTDCQPPETE R
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

XP_038876219.1 uncharacterized protein LOC120068500 isoform X2 [Benincasa hispida]

1.4e-93

93.12

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS  PHASS SIKPS + VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKAR+NQAVIDAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALL+VP NEGK+KT+RINLTEKFAPAACVSCTDCQPPETE R
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KF26 Uncharacterized protein

5.3e-99

95.77

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFASIFKRSSTPHASSNSIKP+ NEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEK R+NQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDIL+MDALLYVPENEGK+KTLRINL+EKFAPAACVSCTDCQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

A0A1S3CBF0 uncharacterized protein LOC103498925 isoform X1

4.5e-98

95.77

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKPS NEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKAR+NQAV DAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDIL+MDALLYVPENEGK+KTLRINLTEKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

A0A5D3DMW4 Vacuolar sorting-associated protein 62

4.5e-98

95.77

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKPS NEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKAR+NQAV DAIGEPIAKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDIL+MDALLYVPENEGK+KTLRINLTEKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

A0A6J1GQN1 uncharacterized protein LOC111456591 isoform X1

1.4e-88

85.34

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Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKR  SIFKRS TP+ASS+S++PS   VNKSWGR AVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA++N+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAP--AACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGE+SWISFLRPRDWDILIMDALL+VPENEGK++T+RINLTEKFAP  AACV+CTDCQ PE EKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAP--AACVSCTDCQPPETEKR

A0A6J1JQM9 uncharacterized protein LOC111488050 isoform X1

7.6e-90

86.91

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Query:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH
        MLAKRF SIFKRS TP+ASS+S++PS   VNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA++N+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAA--CVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGEDSWISFLRPRDWDILIMDALL+VPENEGK++TLRINLTEKFAPAA  CV+CTDCQ P  EKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAA--CVSCTDCQPPETEKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20390.1 unknown protein

1.6e-60

62.63

Show/hide

Query:  MLAKRFASIFKRSST--PHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAV
        M A+RF S FK SST  P  ++ ++         S+GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA+EK  +++ +I+AIGEPI KGPWYNASLAV
Subjt:  MLAKRFASIFKRSST--PHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAV

Query:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEK
        +H+RHS+SC+FPV GPQGTGIL LKAVRNGEDS   FL+ RDWDILIMDAL++VP NEG ++TLRIN+T+   P+        +P E EK
Subjt:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEK

AT2G20390.2 unknown protein

4.6e-55

52.65

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Query:  MLAKRFASIFKRSST--PHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAV
        M A+RF S FK SST  P  ++ ++         S+GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA+EK  +++ +I+AIGEPI KGPWYNASLAV
Subjt:  MLAKRFASIFKRSST--PHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAV

Query:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNG------------------------------------EDSWISFLRPRDWDILIMDALLYVPENEGKEKTL
        +H+RHS+SC+FPV GPQGTGIL LKAVRNG                                    EDS   FL+ RDWDILIMDAL++VP NEG ++TL
Subjt:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNG------------------------------------EDSWISFLRPRDWDILIMDALLYVPENEGKEKTL

Query:  RINLTEKFAPAACVSCTDCQPPETEK
        RIN+T+   P+        +P E EK
Subjt:  RINLTEKFAPAACVSCTDCQPPETEK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCAACTCCACATGCTTCCAGCAATTCCATAAAGCCATCGGTGAATGAGGTGAATAAATCATGGGGTCGGAA
AGCCGTCTCCTTTGTACTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCTATAGAGAAAGCCAGAA
GTAATCAAGCAGTTATAGATGCTATTGGTGAACCCATTGCTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACATTTCCA
GTATCAGGGCCACAAGGCACAGGCATCCTCCAACTGAAGGCAGTCCGTAATGGAGAGGATTCCTGGATTTCATTTCTCCGGCCTCGAGACTGGGACATTCTGATCATGGA
TGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGGAGAAAACTTTGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTTGTGTCTCATGCACTGATTGTCAGCCTC
CAGAGACAGAGAAGAGATGA

mRNA sequence

Show/hide mRNA sequence

TAATAATAATTTATTTGCAAAACCTAGATCAAATTTGGAGTGGGCTGGCTATACACATTTATGAAATTAAAGACAAACTCCTAACGATTGAAGGAGCAAGGTACCCCAAA
GTTGAAAATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCAACTCCACATGCTTCCAGCAATTCCATAAAGCCATCGGTGAATGAGGTGAATAAATCATGGG
GTCGGAAAGCCGTCTCCTTTGTACTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCTATAGAGAAA
GCCAGAAGTAATCAAGCAGTTATAGATGCTATTGGTGAACCCATTGCTAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCAC
ATTTCCAGTATCAGGGCCACAAGGCACAGGCATCCTCCAACTGAAGGCAGTCCGTAATGGAGAGGATTCCTGGATTTCATTTCTCCGGCCTCGAGACTGGGACATTCTGA
TCATGGATGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGGAGAAAACTTTGCGTATTAATCTCACTGAGAAGTTTGCCCCTGCTGCTTGTGTCTCATGCACTGATTGT
CAGCCTCCAGAGACAGAGAAGAGATGAAGTTAGCTTTTAAGGATATTGTGAAACTATTGTCAAAAGTTAGCAGTTCCTATTAGTTTTCTGTCCCGACATGATTTTGAGCT
AACCGAAGGATCGAAGTATTCGTTATACCCACCAAAATAATATGTTCTTTGAGGTTGAGTTCAAACCGCGGTTGAAGATTTATTATTATACAACCTTGCTGACATAAAAT
GTGGTAAAGTTATTTGTTTCTTCTGTAAAATCCAATTTCTAAAAGAAAAATAGTAACTATTCATCTGTT

Protein sequence

Show/hide protein sequence

MLAKRFASIFKRSSTPHASSNSIKPSVNEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARSNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFP
VSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILIMDALLYVPENEGKEKTLRINLTEKFAPAACVSCTDCQPPETEKR

PI0012430 (gene) of Melon (PI 482460) v1 genome