; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012459 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012459
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30A
Genome locationchr02:6990003..6994284
RNA-Seq ExpressionPI0012459
SyntenyPI0012459
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139072.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis sativus]8.5e-14195.17Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGR+HDRRRSPP   RSPRYSRSPAQR GRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRS+SPRDRP SR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR

Query:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        ERSFPRQESRGRSYSRSP LDGSRSRSQSP +PGSRSPSPVRGRSLSRSRSRSKSV RSRSRS  RSPRRSPRHEEEYRSEPNGDRSPSQ
Subjt:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

XP_008450302.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis melo]2.2e-13692.86Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDR
        VLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSP RYSRSPRYSRSPAQR GRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRSVSPRDR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDR

Query:  PVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        P SRERSFPRQESRGRSYSRSP LDGSRSRS SP R   RSPSPVRGRSLSRSRSRSKSVSRSRS    RSP+ SPRHEEEYRSEPNGDRSP Q
Subjt:  PVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

XP_008450303.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Cucumis melo]3.9e-13894.14Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP RYSRSPRYSRSPAQR GRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRSVSPRDRP SR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR

Query:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        ERSFPRQESRGRSYSRSP LDGSRSRS SP R   RSPSPVRGRSLSRSRSRSKSVSRSRS    RSP+ SPRHEEEYRSEPNGDRSP Q
Subjt:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

XP_038879567.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Benincasa hispida]1.7e-13391.84Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDR
        VLLGRELTVVFAEENRKKPSDMRARERG    SGR HDRRRSPPRYSRSPRYSRSPAQRH RYSRSP PRHAR+RSRSYDYAS PPKQ+AYSRSVSPRDR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDR

Query:  PVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        P SRERSFPRQ+SRGR  SRSP LDGSRSRSQSP R GSRSPSPVRGRSLSRSRSRSKSVSRSRS    RSPR SPRH EEYRSEPNGDRSPSQ
Subjt:  PVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

XP_038879568.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Benincasa hispida]3.1e-13593.1Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGR HDRRRSPPRYSRSPRYSRSPAQRH RYSRSP PRHAR+RSRSYDYAS PPKQ+AYSRSVSPRDRP SR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR

Query:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        ERSFPRQ+SRGR  SRSP LDGSRSRSQSP R GSRSPSPVRGRSLSRSRSRSKSVSRSRS    RSPR SPRH EEYRSEPNGDRSPSQ
Subjt:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

TrEMBL top hitse value%identityAlignment
A0A0A0LZX6 RRM domain-containing protein2.4e-14994.16Show/hide
Query:  SAPARFLDTGPLSLVAVQMRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFV
        ++PARFLD+GPLSLVAV MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFV
Subjt:  SAPARFLDTGPLSLVAVQMRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFV

Query:  QYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PP
        QYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGR+HDRRRSPP   RSPRYSRSPAQR GRYSRSPAPRHARSRSRSYDYAS PP
Subjt:  QYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PP

Query:  KQRAYSRSVSPRDRPVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEP
        KQRAYSRS+SPRDRP SRERSFPRQESRGRSYSRSP LDGSRSRSQSP +PGSRSPSPVRGRSLSRSRSRSKSV RSRSRS  RSPRRSPRHEEEYRSEP
Subjt:  KQRAYSRSVSPRDRPVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEP

Query:  NGDRSPSQ
        NGDRSPSQ
Subjt:  NGDRSPSQ

A0A1S3BNX5 serine/arginine-rich SC35-like splicing factor SCL30A isoform X11.0e-13692.86Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDR
        VLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSP RYSRSPRYSRSPAQR GRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRSVSPRDR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDR

Query:  PVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        P SRERSFPRQESRGRSYSRSP LDGSRSRS SP R   RSPSPVRGRSLSRSRSRSKSVSRSRS    RSP+ SPRHEEEYRSEPNGDRSP Q
Subjt:  PVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

A0A1S3BPL2 serine/arginine-rich SC35-like splicing factor SCL30A isoform X21.9e-13894.14Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR
        VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP RYSRSPRYSRSPAQR GRYSRSPAPRHARSRSRSYDYAS PPKQRAYSRSVSPRDRP SR
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPVSR

Query:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        ERSFPRQESRGRSYSRSP LDGSRSRS SP R   RSPSPVRGRSLSRSRSRSKSVSRSRS    RSP+ SPRHEEEYRSEPNGDRSP Q
Subjt:  ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

A0A6J1DH06 serine/arginine-rich SC35-like splicing factor SCL30A isoform X17.0e-12586.49Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GRG  RDLPTSLLVRNL HDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPR
        GCVLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSPPRYSRSPRYSRSPA RH RYSRSPAPRHARSRSRSYDY S PPKQRA SRSVSPR
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPR

Query:  DRPVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        DR  SRERS+PRQ SRGRSYS+SP L+GSRSRSQSP R GSRS SP RG      RSRS+SVSRS      RSPRRSPRHEEEYRS+PNGDRSPSQ
Subjt:  DRPVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

A0A6J1DIJ4 serine/arginine-rich SC35-like splicing factor SCL30A isoform X21.3e-12687.67Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GRG  RDLPTSLLVRNL HDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRG--RDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPV
        GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPA RH RYSRSPAPRHARSRSRSYDY S PPKQRA SRSVSPRDR  
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYAS-PPKQRAYSRSVSPRDRPV

Query:  SRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
        SRERS+PRQ SRGRSYS+SP L+GSRSRSQSP R GSRS SP RG      RSRS+SVSRS      RSPRRSPRHEEEYRS+PNGDRSPSQ
Subjt:  SRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 101.9e-2639.36Show/hide
Query:  TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARE---------
        TSL VRN++ D R EDLRR FG++G I D+Y+P D+YT  PRGF +VQ+ D  DA DA H++D   + GR++ + FA+ +RK P+ M+A+E         
Subjt:  TSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARE---------

Query:  --------RGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVS-PRDRPVSRERSFPRQESRGRSYSRSP
                R   R ++RRRS  R S    Y RS + R+ R    P  R  RSRS S +     + R++SRS S  R R  S+ +   + +SR RS S + 
Subjt:  --------RGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVS-PRDRPVSRERSFPRQESRGRSYSRSP

Query:  CLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRS
            S++ S++  + GSR     R +   RS+S+S+S SRSRS+S  RS
Subjt:  CLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRS

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL282.0e-3143.95Show/hide
Query:  LVAVQMRGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDP
        +   + R RSY+P     SPPR   GY        P  R        P+ LL+RNL  D RP DLR  F +FG +KDIYLP++YYTGEPRGFGFV+Y   
Subjt:  LVAVQMRGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDP

Query:  ADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQ
         DAA+A   M+  V+ GRE+ +VFAEENRK P +MR     SGR  D +    RSP R  RS   SRSP +R  R+          S+ R  D  SP ++
Subjt:  ADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQ

Query:  -RAYSRSVSPRDRPVSRERS--FPRQESRGRSYSRSPCLDGSRSRSQS
         R+ SRS  PR+    + R+   PR+E R  +  RS CL  SRSRS S
Subjt:  -RAYSRSVSPRDRPVSRERS--FPRQESRGRSYSRSPCLDGSRSRSQS

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL302.4e-2939.3Show/hide
Query:  RSYTP---SPP-RGYGRRGRSPSP---------RGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA
        R Y+P   SPP RGYG RGRSP P          G   GR      SLLVRN+  DCRPE+LR PF +FG ++D+Y+P+DYY+G+PRGF FV++VD  DA
Subjt:  RSYTP---SPP-RGYGRRGRSPSP---------RGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA

Query:  ADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSV
         +A+  M+     GRE+TVV A E+RK+P +MR + R               +RS   S S  + HGR SRS +   +RS  R  D  S  + R+YS   
Subjt:  ADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSV

Query:  SPRDRPVSRERSFPRQESRGRSYSR---SPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPR
             P  R R  P +     +YSR   SP  +G+ + +    R G        G      R   ++VSRS S S  RS   SPR
Subjt:  SPRDRPVSRERSFPRQESRGRSYSR---SPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPR

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A1.6e-7863.01Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGR+ G R  DLPTSLLVRNL HDCR EDLRRPF QFG +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPV
         +LLGRELTVVFAEENRKKP++MR R+RG  S RF DRRRSPPRYSRSP                P  R  RSRSRS  Y SPP +R  SRSVSP+DR  
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPV

Query:  SRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
         +E          RSYSRSP  +GSR RS SP R  S S SP   RS+S  ++RS +  ++RS+SP   PR+S       R   NGDRSPSQ
Subjt:  SRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL335.6e-8766.33Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG 
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSRE
        +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+PPRY     YSR         SRSP PR  RSRSRS DY SPP +R + RS+SPR+      
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSRE

Query:  RSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRS--RSRSKSVSRSRSRSPHRSPRRSPRH-------EEEYRSEPNGDRSPS
            R + R RSYSRSP  DGSR RS +P R  SRS SP   RS+SRS  RSRS S  R+RS SP RS  RSPR           Y  EP   RS S
Subjt:  RSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRS--RSRSKSVSRSRSRSPHRSPRRSPRH-------EEEYRSEPNGDRSPS

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 334.0e-8866.33Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG 
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSRE
        +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+PPRY     YSR         SRSP PR  RSRSRS DY SPP +R + RS+SPR+      
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSRE

Query:  RSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRS--RSRSKSVSRSRSRSPHRSPRRSPRH-------EEEYRSEPNGDRSPS
            R + R RSYSRSP  DGSR RS +P R  SRS SP   RS+SRS  RSRS S  R+RS SP RS  RSPR           Y  EP   RS S
Subjt:  RSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRS--RSRSKSVSRSRSRSPHRSPRRSPRH-------EEEYRSEPNGDRSPS

AT1G55310.2 SC35-like splicing factor 337.8e-8470.54Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKHHMDG 
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGC

Query:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSRE
        +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+PPRY     YSR         SRSP PR  RSRSRS DY SPP +R + RS+SPR+      
Subjt:  VLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSRE

Query:  RSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVR
            R + R RSYSRSP  DGSR RS +P R  SRS SP +
Subjt:  RSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVR

AT1G55310.3 SC35-like splicing factor 334.6e-8463.55Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTG------------EPRGFGFVQYVDPA
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GR RDLPTSLLVRNL HDCR EDLR+ F QFG +KDIYLP+DYYTG            +PRGFGFVQ++DPA
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTG------------EPRGFGFVQYVDPA

Query:  DAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSG-RFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYS
        DAADAKHHMDG +LLGRELTVVFAEENRKKP++MRARERG G RF DRRR+PPRY     YSR         SRSP PR  RSRSRS DY SPP +R + 
Subjt:  DAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSG-RFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYS

Query:  RSVSPRDRPVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRS--RSRSKSVSRSRSRSPHRSPRRSPRH-------EEEYR
        RS+SPR+          R + R RSYSRSP  DGSR RS +P R  SRS SP   RS+SRS  RSRS S  R+RS SP RS  RSPR           Y 
Subjt:  RSVSPRDRPVSRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRS--RSRSKSVSRSRSRSPHRSPRRSPRH-------EEEYR

Query:  SEPNGDRSPS
         EP   RS S
Subjt:  SEPNGDRSPS

AT3G13570.1 SC35-like splicing factor 30A1.2e-7963.01Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGR+ G R  DLPTSLLVRNL HDCR EDLRRPF QFG +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYVG-RGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPV
         +LLGRELTVVFAEENRKKP++MR R+RG  S RF DRRRSPPRYSRSP                P  R  RSRSRS  Y SPP +R  SRSVSP+DR  
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPV

Query:  SRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ
         +E          RSYSRSP  +GSR RS SP R  S S SP   RS+S  ++RS +  ++RS+SP   PR+S       R   NGDRSPSQ
Subjt:  SRERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ

AT5G18810.1 SC35-like splicing factor 281.4e-3243.95Show/hide
Query:  LVAVQMRGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDP
        +   + R RSY+P     SPPR   GY        P  R        P+ LL+RNL  D RP DLR  F +FG +KDIYLP++YYTGEPRGFGFV+Y   
Subjt:  LVAVQMRGRSYTP-----SPPR---GYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDP

Query:  ADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQ
         DAA+A   M+  V+ GRE+ +VFAEENRK P +MR     SGR  D +    RSP R  RS   SRSP +R  R+          S+ R  D  SP ++
Subjt:  ADAADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRR----RSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQ

Query:  -RAYSRSVSPRDRPVSRERS--FPRQESRGRSYSRSPCLDGSRSRSQS
         R+ SRS  PR+    + R+   PR+E R  +  RS CL  SRSRS S
Subjt:  -RAYSRSVSPRDRPVSRERS--FPRQESRGRSYSRSPCLDGSRSRSQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCATCAGCTCCAGCGAGATTCTTAGACACCGGGCCTTTGTCTTTAGTTGCTGTACAAATGAGGGGCAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAG
AAGGGGTCGGAGCCCTAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCCACTAGCCTTCTAGTTCGCAATCTCAGCCATGACTGCAGGCCTGAGGATCTTC
GTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTGGAGAACCACGCGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGAT
GCTGCAGATGCTAAACACCATATGGACGGCTGTGTTCTTCTCGGTCGGGAATTGACTGTGGTATTTGCTGAGGAAAACAGGAAGAAACCATCTGATATGAGGGCAAGAGA
GAGAGGAAGTGGACGATTTCATGATCGAAGAAGATCTCCTCCGCGGTATTCTCGTTCGCCTCGATATTCACGTTCCCCGGCTCAACGGCATGGGAGGTATTCTCGTTCAC
CAGCTCCACGCCATGCAAGGTCTAGGTCCCGTAGTTATGATTATGCATCCCCGCCAAAACAAAGGGCTTACTCAAGATCAGTGTCCCCTCGTGACAGACCAGTCAGTCGA
GAGAGGTCTTTCCCACGACAGGAGAGCCGTGGTAGGTCATACTCCCGATCTCCATGTCTAGATGGTTCAAGGAGTAGGAGTCAGAGTCCACCACGACCTGGAAGTCGAAG
TCCAAGCCCTGTAAGAGGACGAAGCCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTAGCCGGAGCCGAAGTCGTAGTCCCCACCGTAGTCCTCGGCGTAGTCCAAGAC
ATGAAGAAGAGTATAGAAGTGAACCGAATGGTGATAGGAGCCCAAGTCAATAG
mRNA sequenceShow/hide mRNA sequence
CGCCGATTCACTCTCTCTTCAAGGTCTCTCTCTCCTTCTTCCTACTATTCACATTCACACAATTTCTTCACTTCTTTTATCGATCTATTCCCGCTTCACCATTTTCAGCT
AATTTCCCCAATTTTTAACCTCTAATTTCGTATCTCATATGGGTTCATCAGCTCCAGCGAGATTCTTAGACACCGGGCCTTTGTCTTTAGTTGCTGTACAAATGAGGGGC
AGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGAAGAAGGGGTCGGAGCCCTAGCCCTAGGGGGCGCTATGTGGGACGTGGAAGAGACCTTCCCACTAGCCTTCTAGT
TCGCAATCTCAGCCATGACTGCAGGCCTGAGGATCTTCGTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTACCGAAGGATTATTATACTGGAGAACCAC
GCGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGATGCTGCAGATGCTAAACACCATATGGACGGCTGTGTTCTTCTCGGTCGGGAATTGACTGTGGTATTTGCTGAG
GAAAACAGGAAGAAACCATCTGATATGAGGGCAAGAGAGAGAGGAAGTGGACGATTTCATGATCGAAGAAGATCTCCTCCGCGGTATTCTCGTTCGCCTCGATATTCACG
TTCCCCGGCTCAACGGCATGGGAGGTATTCTCGTTCACCAGCTCCACGCCATGCAAGGTCTAGGTCCCGTAGTTATGATTATGCATCCCCGCCAAAACAAAGGGCTTACT
CAAGATCAGTGTCCCCTCGTGACAGACCAGTCAGTCGAGAGAGGTCTTTCCCACGACAGGAGAGCCGTGGTAGGTCATACTCCCGATCTCCATGTCTAGATGGTTCAAGG
AGTAGGAGTCAGAGTCCACCACGACCTGGAAGTCGAAGTCCAAGCCCTGTAAGAGGACGAAGCCTAAGTAGGAGCAGGAGTAGGAGCAAAAGTGTTAGCCGGAGCCGAAG
TCGTAGTCCCCACCGTAGTCCTCGGCGTAGTCCAAGACATGAAGAAGAGTATAGAAGTGAACCGAATGGTGATAGGAGCCCAAGTCAATAGGCAAACAGTTTAAAACTTG
GGAAGAACTACAATGTACTATTGCCATTGTTTAGTTTGATGTTTCCGTTATAGACATCATTTCCTTAGTATTGTTGGCTAGCGTTTGTTGGGAATTTGTGCTTTATCAAA
AATTGATTGTTGAGTACTTTTACTTTTATGCTGTCTTTCGTGGTGTGATGACACTTTACTATATATTTTTCGAGCTTGTTTTTTATATAGTTTTCTTTTGCATGCATGTT
A
Protein sequenceShow/hide protein sequence
MGSSAPARFLDTGPLSLVAVQMRGRSYTPSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPAD
AADAKHHMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRYSRSPRYSRSPAQRHGRYSRSPAPRHARSRSRSYDYASPPKQRAYSRSVSPRDRPVSR
ERSFPRQESRGRSYSRSPCLDGSRSRSQSPPRPGSRSPSPVRGRSLSRSRSRSKSVSRSRSRSPHRSPRRSPRHEEEYRSEPNGDRSPSQ