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PI0012488 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012488
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor bHLH101-like
Genome locationchr08:5443450..5443716
RNA-Seq ExpressionPI0012488
SyntenyPI0012488
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026018.1 transcription factor bHLH101-like [Cucumis melo var. makuwa]3.3e-2982.02Show/hide
Query:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSMVGFASYDISSIT
        M PF+QFSSLQPSQ+VKLESCP   SAG      VVGDD+ AM KKLKHNANERDRRRKINSLYYSLRCLLPPT+SMVGFASYDISSIT
Subjt:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSMVGFASYDISSIT

KAG6595594.1 Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1768.92Show/hide
Query:  FFQFSSLQPSQEVKLESCPPPSAGVG---GCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        F QFSS QPS  VK+ESC PPSAG G   G     GDD +A+AKKLKHNA+ERDRR+K+NSLY SLRCLLP TN
Subjt:  FFQFSSLQPSQEVKLESCPPPSAGVG---GCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

XP_004144366.2 transcription factor bHLH101 [Cucumis sativus]2.9e-2279.22Show/hide
Query:  MGPFFQFSSLQPSQEVKLESCPPP-SAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM
        M PFFQFSSLQPSQ+VKLESCP P SAG      VV DD+  MAKKLKHNANERDRRRKINSLY SLRCLLPPT+SM
Subjt:  MGPFFQFSSLQPSQEVKLESCPPP-SAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM

XP_008455701.1 PREDICTED: transcription factor bHLH101-like [Cucumis melo]1.7e-2279.22Show/hide
Query:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM
        M PF+QFSSLQPSQ+VKLESCP   SAG      VVGDD+ AM KKLKHNANERDRRRKINSLYYSLRCLLPPT+SM
Subjt:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM

XP_038882377.1 transcription factor bHLH101-like [Benincasa hispida]2.8e-2070.89Show/hide
Query:  PFFQFSSLQPSQEVKLESCPPPSAG-----VGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM
        PF QFSS Q SQ VKLE+C PPSAG      GGC   V  D+ A+AKKLKHNA+ERDRRRKINSLYYSLRCLLP TN M
Subjt:  PFFQFSSLQPSQEVKLESCPPPSAG-----VGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM

TrEMBL top hitse value%identityAlignment
A0A1S3C1M0 transcription factor bHLH101-like8.4e-2379.22Show/hide
Query:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM
        M PF+QFSSLQPSQ+VKLESCP   SAG      VVGDD+ AM KKLKHNANERDRRRKINSLYYSLRCLLPPT+SM
Subjt:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSM

A0A2J6KMM6 BHLH domain-containing protein1.9e-0643.66Show/hide
Query:  FFQFSSLQPSQEVKLESCPPPSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        F +F S   S +++L+  P  S+  GG ++    D + + KKL HNA+ERDRR+K+N+LY SLR +LP +N
Subjt:  FFQFSSLQPSQEVKLESCPPPSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

A0A5A7SIL4 Transcription factor bHLH101-like1.6e-2982.02Show/hide
Query:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSMVGFASYDISSIT
        M PF+QFSSLQPSQ+VKLESCP   SAG      VVGDD+ AM KKLKHNANERDRRRKINSLYYSLRCLLPPT+SMVGFASYDISSIT
Subjt:  MGPFFQFSSLQPSQEVKLESCPP-PSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSMVGFASYDISSIT

A0A6J1EBF8 transcription factor bHLH101-like5.3e-1767.57Show/hide
Query:  FFQFSSLQPSQEVKLESCPPPSAGVG---GCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        F QFSS +PS  VK+ESC PPSAG G   G     GDD +A+AKKLKHNA+ERDRR+K+NSLY SLRCLLP TN
Subjt:  FFQFSSLQPSQEVKLESCPPPSAGVG---GCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

A0A6J1HRN3 transcription factor bHLH101-like9.0e-1767.57Show/hide
Query:  FFQFSSLQPSQEVKLESCPPPSAGVG---GCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        F QFSS QPS  VK+ESC PPSAG G   G      DD +A+AKKLKHNA+ERDRR+K+NSLY SLRCLLP TN
Subjt:  FFQFSSLQPSQEVKLESCPPPSAGVG---GCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

SwissProt top hitse value%identityAlignment
Q9FYE6 Transcription factor bHLH1011.2e-0568.75Show/hide
Query:  IAMAKKLKHNANERDRRRKINSLYYSLRCLLP
        + + KKL HNA+ERDRRRK+N+LY SLR LLP
Subjt:  IAMAKKLKHNANERDRRRKINSLYYSLRCLLP

Q9M1K0 Transcription factor ORG37.6e-0565.71Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLP
        D+   + KKL HNA+ERDRRRKINSL+ SLR  LP
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLP

Q9M1K1 Transcription factor ORG22.9e-0455.26Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        D+   + KKL HNA+ERDRR+KIN+L+ SLR  LP ++
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

Q9ZVB5 Transcription factor bHLH1002.0e-0560.53Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        D+ + M KKL HNA+ER+RR+KIN+++ SLR  LPPTN
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

Arabidopsis top hitse value%identityAlignment
AT2G41240.1 basic helix-loop-helix protein 1001.4e-0660.53Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        D+ + M KKL HNA+ER+RR+KIN+++ SLR  LPPTN
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

AT2G41240.2 basic helix-loop-helix protein 1001.4e-0660.53Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        D+ + M KKL HNA+ER+RR+KIN+++ SLR  LPPTN
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-0555.26Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN
        D+   + KKL HNA+ERDRR+KIN+L+ SLR  LP ++
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTN

AT3G56980.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.4e-0665.71Show/hide
Query:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLP
        D+   + KKL HNA+ERDRRRKINSL+ SLR  LP
Subjt:  DDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLP

AT5G04150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.3e-0768.75Show/hide
Query:  IAMAKKLKHNANERDRRRKINSLYYSLRCLLP
        + + KKL HNA+ERDRRRK+N+LY SLR LLP
Subjt:  IAMAKKLKHNANERDRRRKINSLYYSLRCLLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAAGAGGTCAAGCTAGAGAGCTGTCCTCCTCCATCGGCTGGTGTCGGTGGATGTATCAGTGTCGTTGGTGA
CGATGTCATCGCCATGGCTAAGAAACTTAAACACAATGCTAACGAGCGTGACCGTCGAAGAAAGATCAACTCGCTCTATTATTCTCTCCGTTGCTTGCTCCCTCCTACAA
ATTCAATGGTAGGTTTTGCTTCATATGATATATCTTCTATCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCCGTTCTTTCAGTTCTCATCATTGCAGCCATCTCAAGAGGTCAAGCTAGAGAGCTGTCCTCCTCCATCGGCTGGTGTCGGTGGATGTATCAGTGTCGTTGGTGA
CGATGTCATCGCCATGGCTAAGAAACTTAAACACAATGCTAACGAGCGTGACCGTCGAAGAAAGATCAACTCGCTCTATTATTCTCTCCGTTGCTTGCTCCCTCCTACAA
ATTCAATGGTAGGTTTTGCTTCATATGATATATCTTCTATCACCTAG
Protein sequenceShow/hide protein sequence
MGPFFQFSSLQPSQEVKLESCPPPSAGVGGCISVVGDDVIAMAKKLKHNANERDRRRKINSLYYSLRCLLPPTNSMVGFASYDISSIT