| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0045328.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIRL VSP GAPVLFVKKKDGS+RLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRY HYEFI
Subjt: TAFCSRYRHYEFI
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| KAA0047209.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.2e-53 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIR VSP GAPVLFVKKKDGS+RLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAFCSRY HYEFI
Subjt: TAFCSRYRHYEFI
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| KAA0047446.1 pol protein [Cucumis melo var. makuwa] | 4.6e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIR VSP GAPVLFVKKKDGS+RLCID+RELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRYRHYEFI
Subjt: TAFCSRYRHYEFI
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| KAA0056464.1 gag protease polyprotein [Cucumis melo var. makuwa] | 4.6e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIRLRVSP GAPV FVKKKDGS+RLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRY HYEFI
Subjt: TAFCSRYRHYEFI
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| TYJ98640.1 pol protein [Cucumis melo var. makuwa] | 4.6e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIR VSP GAPVLFVKKKDGS+RLCID+RELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRYRHYEFI
Subjt: TAFCSRYRHYEFI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TR38 Ty3-gypsy retrotransposon protein | 2.2e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIRL VSP GAPVLFVKKKDGS+RLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRY HYEFI
Subjt: TAFCSRYRHYEFI
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| A0A5A7TZP2 Pol protein | 2.2e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIR VSP GAPVLFVKKKDGS+RLCID+RELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRYRHYEFI
Subjt: TAFCSRYRHYEFI
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| A0A5A7U149 Reverse transcriptase | 4.5e-53 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIR VSP GAPVLFVKKKDGS+RLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAFCSRY HYEFI
Subjt: TAFCSRYRHYEFI
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| A0A5A7UMP2 Gag protease polyprotein | 2.2e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIRLRVSP GAPV FVKKKDGS+RLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRY HYEFI
Subjt: TAFCSRYRHYEFI
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| A0A5D3BFS1 Pol protein | 2.2e-52 | 91.15 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
M P ELKELKVQLQELLDKGFIR VSP GAPVLFVKKKDGS+RLCID+RELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQL+IKDGD+PK
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEFI
TAF SRYRHYEFI
Subjt: TAFCSRYRHYEFI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT41 Transposon Tf2-12 polyprotein | 2.4e-19 | 39.25 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
+ P +++ + ++ + L G IR + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH ++++ GD K
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAF-CSR
AF C R
Subjt: TAF-CSR
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| P31843 RNA-directed DNA polymerase homolog | 1.5e-21 | 63.38 | Show/hide |
Query: SIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPKTAFCSRYRHYEF
S+R+CIDYR L KVT+KNKYP+PR+DDLFD+L AT F+K+DLRSGY Q++I GD PKT +RY +EF
Subjt: SIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPKTAFCSRYRHYEF
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.4e-22 | 44.64 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
+T +E+ +Q+LLD FI SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ ++ D K
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEF
TAF + YE+
Subjt: TAFCSRYRHYEF
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.4e-22 | 44.64 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
+T +E+ +Q+LLD FI SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ ++ D K
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAFCSRYRHYEF
TAF + YE+
Subjt: TAFCSRYRHYEF
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| Q9UR07 Transposon Tf2-11 polyprotein | 2.4e-19 | 39.25 | Show/hide |
Query: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
+ P +++ + ++ + L G IR + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+T+F+K+DL+S YH ++++ GD K
Subjt: MTPTELKELKVQLQELLDKGFIRLRVSPQGAPVLFVKKKDGSIRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLKIKDGDIPK
Query: TAF-CSR
AF C R
Subjt: TAF-CSR
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