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PI0012523 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012523
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:18393054..18393602
RNA-Seq ExpressionPI0012523
SyntenyPI0012523
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035422.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]7.4e-5263.31Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        KAR+IAF+KSID+K WK ++ G  HPS  DV GK T K EI WS  +DE + GNS ALNAIFN +DQN+FK INTC   KEAW IL+ AYEG SKVK+S+
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQIL+SKFE++K+ +DE IVE+N+ VLD+ N+SFAL EK+T  K VRKV  S+  RF+MKV+TIEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

KAA0040128.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.5e-5263.91Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        K+RM AFL S+D ++W+V+++GW HP+  D  GKVT K E+KW++ ED+ +LGNSHALN +FN +DQN+FKLINT  S K A  ILKVAYEGISKVKMSR
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQILTS+FE+L+M +DE IVE+N+ VLDI NKS ALG+K++  KLV+KVL S+  RF+MKV+ IEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

KAA0046626.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.3e-5364.12Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        K +MI+F KSID+K WKVV+T W HPS  DV GKVT KPEI WS  EDE SL NS ALNA++N +DQNVFKLINTCTS K+AW ILKVA EG SKVK+SR
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNIL-VLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQ+L+SKF++LK+++DEI+ E+N+L V+D+ N+SFAL EK++   LV+KVL ++  RF++KV+ IEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNIL-VLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

KAA0058905.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]6.5e-5669.88Show/hide
Query:  MIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSRLQI
        MIAFLKSIDNK+WK VV G  HP   DV GKV+ KPE+ WS+ EDE +LGNS  LNA FN +DQNVF+LINTCT TKEAW IL+VAYEG SK KM RLQI
Subjt:  MIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSRLQI

Query:  LTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LTS FE+LKM DDE IV++N+ VLDI N+SFALGEK++K KLVRKVL S+  RF+MKV+ I+EAND
Subjt:  LTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

XP_008464095.1 PREDICTED: uncharacterized protein LOC103502061 [Cucumis melo]7.4e-5263.31Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        KAR+IAF+KSID+K WK ++ G  HPS  DV GK T K EI WS  +DE + GNS ALNAIFN +DQN+FK INTC   KEAW IL+ AYEG SKVK+S+
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQIL+SKFE++K+ +DE IVE+N+ VLD+ N+SFAL EK+T  K VRKV  S+  RF+MKV+TIEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

TrEMBL top hitse value%identityAlignment
A0A1S3CKP5 uncharacterized protein LOC1035020613.6e-5263.31Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        KAR+IAF+KSID+K WK ++ G  HPS  DV GK T K EI WS  +DE + GNS ALNAIFN +DQN+FK INTC   KEAW IL+ AYEG SKVK+S+
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQIL+SKFE++K+ +DE IVE+N+ VLD+ N+SFAL EK+T  K VRKV  S+  RF+MKV+TIEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

A0A5A7SVY3 Gag-proteinase polyprotein3.6e-5263.31Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        KAR+IAF+KSID+K WK ++ G  HPS  DV GK T K EI WS  +DE + GNS ALNAIFN +DQN+FK INTC   KEAW IL+ AYEG SKVK+S+
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQIL+SKFE++K+ +DE IVE+N+ VLD+ N+SFAL EK+T  K VRKV  S+  RF+MKV+TIEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

A0A5A7TAY2 Gag-pol polyprotein7.2e-5363.91Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        K+RM AFL S+D ++W+V+++GW HP+  D  GKVT K E+KW++ ED+ +LGNSHALN +FN +DQN+FKLINT  S K A  ILKVAYEGISKVKMSR
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQILTS+FE+L+M +DE IVE+N+ VLDI NKS ALG+K++  KLV+KVL S+  RF+MKV+ IEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

A0A5A7TXB8 Gag-proteinase polyprotein1.1e-5364.12Show/hide
Query:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR
        K +MI+F KSID+K WKVV+T W HPS  DV GKVT KPEI WS  EDE SL NS ALNA++N +DQNVFKLINTCTS K+AW ILKVA EG SKVK+SR
Subjt:  KARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSR

Query:  LQILTSKFESLKMMDDEIIVEYNIL-VLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LQ+L+SKF++LK+++DEI+ E+N+L V+D+ N+SFAL EK++   LV+KVL ++  RF++KV+ IEEAND
Subjt:  LQILTSKFESLKMMDDEIIVEYNIL-VLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

A0A5A7UZ92 Gag-proteinase polyprotein3.1e-5669.88Show/hide
Query:  MIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSRLQI
        MIAFLKSIDNK+WK VV G  HP   DV GKV+ KPE+ WS+ EDE +LGNS  LNA FN +DQNVF+LINTCT TKEAW IL+VAYEG SK KM RLQI
Subjt:  MIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSRLQI

Query:  LTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND
        LTS FE+LKM DDE IV++N+ VLDI N+SFALGEK++K KLVRKVL S+  RF+MKV+ I+EAND
Subjt:  LTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEAND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAAACTACACCTACTGGAAAGGCTAGGATGATTGCATTTCTCAAATCTATCGACAACAAAACTTGGAAAGTGGTTGTCACTGGTTGGACACACCCATCTATAAC
TGATGTTGAAGGGAAGGTGACTCCTAAACCAGAGATAAAATGGAGTAATGTTGAAGATGAGACATCTCTTGGTAATTCTCATGCCCTGAATGCGATCTTTAACAGTATTG
ATCAAAATGTGTTTAAGTTAATAAACACTTGCACATCTACTAAAGAAGCTTGGGGAATTCTAAAGGTAGCCTACGAAGGAATATCCAAGGTGAAGATGTCACGTCTTCAA
ATTCTGACATCCAAATTCGAATCTCTCAAAATGATGGATGATGAGATTATTGTTGAATATAACATACTAGTCCTGGATATTGAGAATAAGTCATTTGCTCTCGGCGAAAA
GATAACAAAACCAAAGCTAGTTAGGAAGGTGTTAAGTTCTATGTCGATGCGTTTTGACATGAAGGTTTCTACAATTGAAGAAGCAAATGACCACTTTAAAATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACACAAACTACACCTACTGGAAAGGCTAGGATGATTGCATTTCTCAAATCTATCGACAACAAAACTTGGAAAGTGGTTGTCACTGGTTGGACACACCCATCTATAAC
TGATGTTGAAGGGAAGGTGACTCCTAAACCAGAGATAAAATGGAGTAATGTTGAAGATGAGACATCTCTTGGTAATTCTCATGCCCTGAATGCGATCTTTAACAGTATTG
ATCAAAATGTGTTTAAGTTAATAAACACTTGCACATCTACTAAAGAAGCTTGGGGAATTCTAAAGGTAGCCTACGAAGGAATATCCAAGGTGAAGATGTCACGTCTTCAA
ATTCTGACATCCAAATTCGAATCTCTCAAAATGATGGATGATGAGATTATTGTTGAATATAACATACTAGTCCTGGATATTGAGAATAAGTCATTTGCTCTCGGCGAAAA
GATAACAAAACCAAAGCTAGTTAGGAAGGTGTTAAGTTCTATGTCGATGCGTTTTGACATGAAGGTTTCTACAATTGAAGAAGCAAATGACCACTTTAAAATTGGATGA
Protein sequenceShow/hide protein sequence
MTQTTPTGKARMIAFLKSIDNKTWKVVVTGWTHPSITDVEGKVTPKPEIKWSNVEDETSLGNSHALNAIFNSIDQNVFKLINTCTSTKEAWGILKVAYEGISKVKMSRLQ
ILTSKFESLKMMDDEIIVEYNILVLDIENKSFALGEKITKPKLVRKVLSSMSMRFDMKVSTIEEANDHFKIG