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PI0012525 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012525
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:9169609..9170948
RNA-Seq ExpressionPI0012525
SyntenyPI0012525
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033247.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.0e-2169.01Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP ++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.0e-2370.42Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA S+S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.7e-2267.61Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ

TYK19600.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-2269.01Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]7.7e-2267.61Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ

TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919103.7e-2267.61Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ

A0A5A7SVA1 Retrotransposon gag protein4.9e-2269.01Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP ++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ

A0A5D3CRR8 Retrotransposon gag protein3.4e-2370.42Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA S+S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ

A0A5D3D815 Retrotransposon gag protein2.2e-2269.01Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQP-QATSSSNNQ

A0A5D3DCG3 Retrotransposon gag protein3.7e-2267.61Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+  QA  +S+NQ
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQ-PQATSSSNNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGCCGGGGAGCTTCGGCGGAAATGTAAAAGTTGCCAAATGTGGAGTTTGCGGATTAATAGGACATCCTAATGACAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTATGATCCTCAAGGAAATACTTACAATGCCGGTTGGAGAGATAATCCCAACCTTAGATGGGGAAACAACAATCAACAACCACAAGCAACTTCTT
CCTCAAATAATCAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGCCGGGGAGCTTCGGCGGAAATGTAAAAGTTGCCAAATGTGGAGTTTGCGGATTAATAGGACATCCTAATGACAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTATGATCCTCAAGGAAATACTTACAATGCCGGTTGGAGAGATAATCCCAACCTTAGATGGGGAAACAACAATCAACAACCACAAGCAACTTCTT
CCTCAAATAATCAAGAATGA
Protein sequenceShow/hide protein sequence
MAPLPGSFGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPQATSSSNNQE