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PI0012568 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012568
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:19829250..19830636
RNA-Seq ExpressionPI0012568
SyntenyPI0012568
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047087.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.2e-2871.28Show/hide
Query:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY
        R NNSRLQ+VADDPQ VL+ICN NE  +ENIHYMYDV IVP P+QRRHA VQE ++L+EV+QHVEE+PPV QTQ++ G VS +M+MPTFGM YY
Subjt:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY

KAA0047926.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.7e-3138.46Show/hide
Query:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------
        +G EF  LA+DA+EE ITRYAR YILQLMGG+            E  KTV+DSLP+FCTN HDIW+T                                 
Subjt:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------

Query:  ---RLNNSRLQ-------------------------------------------------------------DVADDPQQVLDICNSNEWYMENIHYMYD
            L+N  L+                                                             +VADDPQQVL+ICN NE YMENIHYMYD
Subjt:  ---RLNNSRLQ-------------------------------------------------------------DVADDPQQVLDICNSNEWYMENIHYMYD

Query:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGD--VSLMMIMPTFGMGYY
        V IVP  +QRR   VQEP++L+E +QHVEE+PPV  T  +T    VS +M+MPTFG  YY
Subjt:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGD--VSLMMIMPTFGMGYY

TYK05068.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.2e-2871.28Show/hide
Query:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY
        R NNSRLQ+VADDPQ VL+ICN NE  +ENIHYMYDV IVP P+QRRHA VQE ++L+EV+QHVEE+PPV QTQ++ G VS +M+MPTFGM YY
Subjt:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY

TYK11154.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.3e-3138.08Show/hide
Query:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------
        +GVEF  LA+DA+EE ITRYAR YILQLMGG+            E  KTV+DSLP+FCTN HDIW+T                                 
Subjt:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------

Query:  ------------------------RLNNSRL----------------------------------------QDVADDPQQVLDICNSNEWYMENIHYMYD
                                R +N R                                          +VADDPQQ L+ICN NE YMENIHYMY+
Subjt:  ------------------------RLNNSRL----------------------------------------QDVADDPQQVLDICNSNEWYMENIHYMYD

Query:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPV--RQTQNETGDVSLMMIMPTFGMGYY
        V IVP  +QRR   VQEP++L+EV+QHVEE+PPV    TQ++   VS +M++PTFG  YY
Subjt:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPV--RQTQNETGDVSLMMIMPTFGMGYY

TYK16382.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.8e-3345.32Show/hide
Query:  VGVEFSGLADDANEEIITRYARTYILQLMG---------------GNYL----------EAVKTVMDSLPNFCTNSHDIWQT------------------
        +G EFSGLA DAN+E ITRYAR YILQLMG                 Y+          E+ K V+DSLP+FCTN HDIW+T                  
Subjt:  VGVEFSGLADDANEEIITRYARTYILQLMG---------------GNYL----------EAVKTVMDSLPNFCTNSHDIWQT------------------

Query:  ---------------------------------RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEM
                                         R NNSRL++V DD QQVL+ICN+NE YMENIHYMYDV IVPTP+QRR A VQEP++L+E++QHVEE+
Subjt:  ---------------------------------RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEM

Query:  PPV
         PV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A5A7TYT2 GATA zinc finger domain-containing protein 10-like isoform X21.1e-2871.28Show/hide
Query:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY
        R NNSRLQ+VADDPQ VL+ICN NE  +ENIHYMYDV IVP P+QRRHA VQE ++L+EV+QHVEE+PPV QTQ++ G VS +M+MPTFGM YY
Subjt:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY

A0A5A7U115 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-3138.46Show/hide
Query:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------
        +G EF  LA+DA+EE ITRYAR YILQLMGG+            E  KTV+DSLP+FCTN HDIW+T                                 
Subjt:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------

Query:  ---RLNNSRLQ-------------------------------------------------------------DVADDPQQVLDICNSNEWYMENIHYMYD
            L+N  L+                                                             +VADDPQQVL+ICN NE YMENIHYMYD
Subjt:  ---RLNNSRLQ-------------------------------------------------------------DVADDPQQVLDICNSNEWYMENIHYMYD

Query:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGD--VSLMMIMPTFGMGYY
        V IVP  +QRR   VQEP++L+E +QHVEE+PPV  T  +T    VS +M+MPTFG  YY
Subjt:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGD--VSLMMIMPTFGMGYY

A0A5D3C1B6 GATA zinc finger domain-containing protein 10-like isoform X21.1e-2871.28Show/hide
Query:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY
        R NNSRLQ+VADDPQ VL+ICN NE  +ENIHYMYDV IVP P+QRRHA VQE ++L+EV+QHVEE+PPV QTQ++ G VS +M+MPTFGM YY
Subjt:  RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYY

A0A5D3CIZ8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.0e-3138.08Show/hide
Query:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------
        +GVEF  LA+DA+EE ITRYAR YILQLMGG+            E  KTV+DSLP+FCTN HDIW+T                                 
Subjt:  VGVEFSGLADDANEEIITRYARTYILQLMGGNYL----------EAVKTVMDSLPNFCTNSHDIWQT---------------------------------

Query:  ------------------------RLNNSRL----------------------------------------QDVADDPQQVLDICNSNEWYMENIHYMYD
                                R +N R                                          +VADDPQQ L+ICN NE YMENIHYMY+
Subjt:  ------------------------RLNNSRL----------------------------------------QDVADDPQQVLDICNSNEWYMENIHYMYD

Query:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPV--RQTQNETGDVSLMMIMPTFGMGYY
        V IVP  +QRR   VQEP++L+EV+QHVEE+PPV    TQ++   VS +M++PTFG  YY
Subjt:  VRIVPTPIQRRHARVQEPNELKEVEQHVEEMPPV--RQTQNETGDVSLMMIMPTFGMGYY

A0A5D3CXW3 Serine/threonine-protein phosphatase 7 long form-like protein8.5e-3445.32Show/hide
Query:  VGVEFSGLADDANEEIITRYARTYILQLMG---------------GNYL----------EAVKTVMDSLPNFCTNSHDIWQT------------------
        +G EFSGLA DAN+E ITRYAR YILQLMG                 Y+          E+ K V+DSLP+FCTN HDIW+T                  
Subjt:  VGVEFSGLADDANEEIITRYARTYILQLMG---------------GNYL----------EAVKTVMDSLPNFCTNSHDIWQT------------------

Query:  ---------------------------------RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEM
                                         R NNSRL++V DD QQVL+ICN+NE YMENIHYMYDV IVPTP+QRR A VQEP++L+E++QHVEE+
Subjt:  ---------------------------------RLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQEPNELKEVEQHVEEM

Query:  PPV
         PV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGGGTAGAATTTTCTGGATTGGCTGATGATGCCAACGAGGAAATTATCACAAGATATGCACGAACATATATTTTACAGTTGATGGGTGGGAATTATCTAGAAGC
CGTAAAAACTGTCATGGATAGTTTGCCGAATTTCTGTACAAACAGTCACGACATATGGCAGACGAGGTTGAACAACAGTAGACTTCAGGATGTTGCAGATGATCCACAAC
AAGTCCTAGACATATGCAACAGTAACGAGTGGTACATGGAGAATATACACTATATGTACGATGTACGTATTGTACCTACACCAATTCAAAGGAGACATGCTCGAGTGCAA
GAGCCTAATGAATTGAAAGAAGTTGAACAACACGTTGAAGAAATGCCTCCTGTGAGACAAACACAGAACGAGACCGGTGATGTTAGTCTAATGATGATAATGCCGACATT
TGGAATGGGATATTATATTCAGGAGTCAGTCAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGGGTAGAATTTTCTGGATTGGCTGATGATGCCAACGAGGAAATTATCACAAGATATGCACGAACATATATTTTACAGTTGATGGGTGGGAATTATCTAGAAGC
CGTAAAAACTGTCATGGATAGTTTGCCGAATTTCTGTACAAACAGTCACGACATATGGCAGACGAGGTTGAACAACAGTAGACTTCAGGATGTTGCAGATGATCCACAAC
AAGTCCTAGACATATGCAACAGTAACGAGTGGTACATGGAGAATATACACTATATGTACGATGTACGTATTGTACCTACACCAATTCAAAGGAGACATGCTCGAGTGCAA
GAGCCTAATGAATTGAAAGAAGTTGAACAACACGTTGAAGAAATGCCTCCTGTGAGACAAACACAGAACGAGACCGGTGATGTTAGTCTAATGATGATAATGCCGACATT
TGGAATGGGATATTATATTCAGGAGTCAGTCAATCCTTAG
Protein sequenceShow/hide protein sequence
MVGVEFSGLADDANEEIITRYARTYILQLMGGNYLEAVKTVMDSLPNFCTNSHDIWQTRLNNSRLQDVADDPQQVLDICNSNEWYMENIHYMYDVRIVPTPIQRRHARVQ
EPNELKEVEQHVEEMPPVRQTQNETGDVSLMMIMPTFGMGYYIQESVNP