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PI0012584 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012584
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:21142341..21142567
RNA-Seq ExpressionPI0012584
SyntenyPI0012584
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043083.1 uncharacterized protein E6C27_scaffold158G00210 [Cucumis melo var. makuwa]1.7e-1164Show/hide
Query:  MRVIQIQIHQEV-----------KYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
        ++VIQ QIHQEV           K QIM  GMTKDRLNVIIVIN  I+ GN EI+LKKMQIMLRKMKK +  HCF
Subjt:  MRVIQIQIHQEV-----------KYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
KAA0058597.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-0769.09Show/hide
Query:  QEVKYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
        Q  K QIMI GMTKD LNVIIVINL II GN EI+ KKMQ ML+ MKK +  HCF
Subjt:  QEVKYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
XP_031737535.1 uncharacterized protein LOC105435097 [Cucumis sativus]2.4e-0588.89Show/hide
Query:  TKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKK
        TKDRLNVIIVINL II GN EI+LKKMQIMLRKMKK
Subjt:  TKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKK
TrEMBL top hitse value%identityAlignment
A0A5A7TIB1 Uncharacterized protein8.2e-1264Show/hide
Query:  MRVIQIQIHQEV-----------KYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
        ++VIQ QIHQEV           K QIM  GMTKDRLNVIIVIN  I+ GN EI+LKKMQIMLRKMKK +  HCF
Subjt:  MRVIQIQIHQEV-----------KYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
A0A5A7UV40 Retrotransposon protein9.4e-0869.09Show/hide
Query:  QEVKYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
        Q  K QIMI GMTKD LNVIIVINL II GN EI+ KKMQ ML+ MKK +  HCF
Subjt:  QEVKYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTAATTCAAATTCAAATTCATCAAGAAGTCAAATATCAAATAATGATAGAAGGCATGACAAAAGATAGGTTGAATGTTATAATTGTCATAAATTTGGTTATTAT
TCCTGGGAATCCAGAAATAAAGTTGAAGAAAATGCAAATTATGTTGAGAAAGATGAAGAAAACAATGAGTCATCATTGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTAATTCAAATTCAAATTCATCAAGAAGTCAAATATCAAATAATGATAGAAGGCATGACAAAAGATAGGTTGAATGTTATAATTGTCATAAATTTGGTTATTAT
TCCTGGGAATCCAGAAATAAAGTTGAAGAAAATGCAAATTATGTTGAGAAAGATGAAGAAAACAATGAGTCATCATTGCTTCTAG
Protein sequenceShow/hide protein sequence
MRVIQIQIHQEVKYQIMIEGMTKDRLNVIIVINLVIIPGNPEIKLKKMQIMLRKMKKTMSHHCF