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PI0012611 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012611
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:15588507..15588923
RNA-Seq ExpressionPI0012611
SyntenyPI0012611
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047856.1 hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]2.1e-1943.2Show/hide
Query:  RMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFI
        R  +VN FY    N ++   +++GK+++F   TIN +Y L N+   LG      P  +   +ALE   WS  KW+   T  YQL PH LTT+ASVWL FI
Subjt:  RMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFI

Query:  KKKIFPMSHDSSINLEAAMLLYCIL
        KK I P  HD+ I++E  MLLY I+
Subjt:  KKKIFPMSHDSSINLEAAMLLYCIL

KAA0049609.1 transposase [Cucumis melo var. makuwa]2.8e-1951.92Show/hide
Query:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML
        +  +KV F  E IN+LYDLPND     GQ  +V   +  A K +++IVW  A    T T + QL PHQLT +A+VWLFFIKKKIFP  HDS+I  E A++
Subjt:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML

Query:  LYCI
        LYCI
Subjt:  LYCI

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-2347.66Show/hide
Query:  KWRMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTG-KYQLHPHQLTTKASVWL
        K RM VV+KFY  K N     + I  +K  FN E IN+LY+ PNDA+ LGQ  V + TK  A +AL+V+ W     E+     +YQL+PH LTTKA+VW+
Subjt:  KWRMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTG-KYQLHPHQLTTKASVWL

Query:  FFIKKKIFPMSHDSSINLEAAMLLYCIL
        FF K KIFP  +DS+I+++  ++LYCI+
Subjt:  FFIKKKIFPMSHDSSINLEAAMLLYCIL

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]2.8e-1951.92Show/hide
Query:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML
        +  +KV F  E IN+LYDLPND     GQ  +V   +  A K +++IVW  A    T T + QL PHQLT +A+VWLFFIKKKIFP  HDS+I  E A++
Subjt:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML

Query:  LYCI
        LYCI
Subjt:  LYCI

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]2.7e-2248.72Show/hide
Query:  FYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFP
        FY+AK ++ +  V +  KKVSF  E IN+LY L ND D+   Q+ +  PTK  +   +++I W  A W  TTT   QL+PHQLTT+A+VWL FIKKKI P
Subjt:  FYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFP

Query:  MSHDSSINLEAAMLLYC
        M +DS++ +E  +LLYC
Subjt:  MSHDSSINLEAAMLLYC

TrEMBL top hitse value%identityAlignment
A0A5A7U0U4 Uncharacterized protein1.0e-1943.2Show/hide
Query:  RMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFI
        R  +VN FY    N ++   +++GK+++F   TIN +Y L N+   LG      P  +   +ALE   WS  KW+   T  YQL PH LTT+ASVWL FI
Subjt:  RMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFI

Query:  KKKIFPMSHDSSINLEAAMLLYCIL
        KK I P  HD+ I++E  MLLY I+
Subjt:  KKKIFPMSHDSSINLEAAMLLYCIL

A0A5A7U806 Transposase1.4e-1951.92Show/hide
Query:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML
        +  +KV F  E IN+LYDLPND     GQ  +V   +  A K +++IVW  A    T T + QL PHQLT +A+VWLFFIKKKIFP  HDS+I  E A++
Subjt:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML

Query:  LYCI
        LYCI
Subjt:  LYCI

A0A5A7V6M5 Gag/pol protein1.5e-2347.66Show/hide
Query:  KWRMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTG-KYQLHPHQLTTKASVWL
        K RM VV+KFY  K N     + I  +K  FN E IN+LY+ PNDA+ LGQ  V + TK  A +AL+V+ W     E+     +YQL+PH LTTKA+VW+
Subjt:  KWRMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTG-KYQLHPHQLTTKASVWL

Query:  FFIKKKIFPMSHDSSINLEAAMLLYCIL
        FF K KIFP  +DS+I+++  ++LYCI+
Subjt:  FFIKKKIFPMSHDSSINLEAAMLLYCIL

A0A5D3CVL7 Uncharacterized protein1.4e-1951.92Show/hide
Query:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML
        +  +KV F  E IN+LYDLPND     GQ  +V   +  A K +++IVW  A    T T + QL PHQLT +A+VWLFFIKKKIFP  HDS+I  E A++
Subjt:  IRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFPMSHDSSINLEAAML

Query:  LYCI
        LYCI
Subjt:  LYCI

A0A5D3DES7 Uncharacterized protein1.3e-2248.72Show/hide
Query:  FYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFP
        FY+AK ++ +  V +  KKVSF  E IN+LY L ND D+   Q+ +  PTK  +   +++I W  A W  TTT   QL+PHQLTT+A+VWL FIKKKI P
Subjt:  FYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTL-GQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFFIKKKIFP

Query:  MSHDSSINLEAAMLLYC
        M +DS++ +E  +LLYC
Subjt:  MSHDSSINLEAAMLLYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGTTCTTCAAAGGGCACACAAGTGGAGGATGGGTGTTGTCAACAAGTTTTACAGTGCAAAACCCAACGCCAAGAAGTTTAGCGTCCAAATAAGGGGAAAGAA
GGTGAGCTTCAATGCTGAGACCATCAACGACCTCTACGACCTACCCAATGACGCAGACACACTAGGGCAGGCGTTTGTGGTCAGACCAACAAAAAAACAGGCCTGGAAAG
CGTTAGAAGTGATCGTCTGGTCTAGGGCCAAGTGGGAGATAACGACTACGGGGAAATATCAATTACATCCACACCAACTAACTACTAAGGCGAGCGTGTGGCTTTTCTTC
ATCAAGAAAAAGATATTTCCTATGTCCCATGATAGTTCAATCAATTTGGAGGCTGCCATGCTTCTTTACTGCATTCTCAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGTTCTTCAAAGGGCACACAAGTGGAGGATGGGTGTTGTCAACAAGTTTTACAGTGCAAAACCCAACGCCAAGAAGTTTAGCGTCCAAATAAGGGGAAAGAA
GGTGAGCTTCAATGCTGAGACCATCAACGACCTCTACGACCTACCCAATGACGCAGACACACTAGGGCAGGCGTTTGTGGTCAGACCAACAAAAAAACAGGCCTGGAAAG
CGTTAGAAGTGATCGTCTGGTCTAGGGCCAAGTGGGAGATAACGACTACGGGGAAATATCAATTACATCCACACCAACTAACTACTAAGGCGAGCGTGTGGCTTTTCTTC
ATCAAGAAAAAGATATTTCCTATGTCCCATGATAGTTCAATCAATTTGGAGGCTGCCATGCTTCTTTACTGCATTCTCAAAAGATAG
Protein sequenceShow/hide protein sequence
MEKVLQRAHKWRMGVVNKFYSAKPNAKKFSVQIRGKKVSFNAETINDLYDLPNDADTLGQAFVVRPTKKQAWKALEVIVWSRAKWEITTTGKYQLHPHQLTTKASVWLFF
IKKKIFPMSHDSSINLEAAMLLYCILKR