; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012617 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012617
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSplicing factor 3A subunit 2
Genome locationchr04:4494416..4497028
RNA-Seq ExpressionPI0012617
SyntenyPI0012617
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]1.8e-17996.33Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT +L+   P     KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]1.5e-17895.76Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPP+GNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]2.6e-17896.05Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_023005145.1 splicing factor 3A subunit 2 [Cucurbita maxima]5.8e-17092.94Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNR PMPPPPQGFPGQG+RQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]2.9e-17795.48Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRP+PPPPQAP PPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein7.4e-17995.76Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPP+GNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 21.3e-17896.05Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 28.7e-18096.33Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT +L+   P     KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 21.3e-17896.05Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 22.8e-17092.94Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
        KVSVRKT            VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPG
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
        GAPPIPPPPPVGNNTMANFTPGTQMNR PMPPPPQGFPGQG+RQ PPPPPPNMG
Subjt:  GAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 23.0e-7654.74Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF
        K             VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF
Subjt:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF

Query:  FSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV-
        ++HW+ ++K F LQ +FK +   A           K PP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V 
Subjt:  FSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV-

Query:  -MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
          A+G  PP P     AP + PP PV +   +   P      PP P      PG     P   PPP+ G
Subjt:  -MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG

Q15428 Splicing factor 3A subunit 27.9e-7754.79Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF
        K             VKIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF
Subjt:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF

Query:  FSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV-
        ++HW+ ++K F LQ +FK +   A           K PP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V 
Subjt:  FSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV-

Query:  -MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPPNMG
          A+G  PP P     AP + PP P  +   +   P      PP P   PP  G   P  G+  P P   PPP+ G
Subjt:  -MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPPNMG

Q54B65 Splicing factor 3A subunit 25.3e-6558.74Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVS
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+        VS
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVS

Query:  VRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST-
         +  ++  T      ++KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK+P+ EID++T 
Subjt:  VRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST-

Query:  --PKFFSHWDPDSKMFTLQLYFK
           KFF+HWD  +K FTLQLYFK
Subjt:  --PKFFSHWDPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 21.6e-6953.23Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF
        K             VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF
Subjt:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF

Query:  FSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSVM
                  F LQ +FK +   A           K PP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V 
Subjt:  FSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSVM

Query:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM
           PP       AP + PP PV +   +   P      PP P   PP  G   P  G+  P P   PP P +
Subjt:  ANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM

Q6AXT8 Splicing factor 3A subunit 28.7e-7655.8Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF
        K             VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF
Subjt:  KTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKF

Query:  FSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP----PPPSVMANGPPRP--MPP
        ++HW+ ++K F LQ +FK +     KPP  P    ++P+G P    PPPP     PP PP    P  +PPPP PG LP    PP     +GPP P  MPP
Subjt:  FSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP----PPPSVMANGPPRP--MPP

Query:  GGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM
          AP + PP PV +   +   P      PP P   PP  G   P  G+  P P   PP P +
Subjt:  GGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPPNM

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein2.2e-11475.75Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK
         VSVR+T            VKIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFKVPSTE+DK
Subjt:  KVSVRKTFVLITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDK

Query:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG
        STPKFFSHWDPDSKMFTLQ+YFK    E NKP     ANG                 PPPPPPPP Q  P   PPPP  G  PPPP  MAN   RPMPP 
Subjt:  STPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPG

Query:  G
        G
Subjt:  G

AT5G07740.1 actin binding5.3e-0446.81Show/hide
Query:  PQEANKPPPVPAANGTVPS-GAPPRPLPPPP---QAPPPPPPPPQQGAPPRVPPPPMP--GSL---PPPPSVMANGPPRPMPP---GGAPPIPPPPPVGN
        P   + PPP P      PS G+PP P PPPP     PPPPPPPP  G+PP  PPPP     S+   PPPP +    PP P PP   GGAPP PPPPP+  
Subjt:  PQEANKPPPVPAANGTVPS-GAPPRPLPPPP---QAPPPPPPPPQQGAPPRVPPPPMP--GSL---PPPPSVMANGPPRPMPP---GGAPPIPPPPPVGN

Query:  NTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG
               P       P PPPP  F G    QPPPPPP   G
Subjt:  NTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPPNMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGAGTGGGGGTCGAAGCCTGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATCGATCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGA
TCTCGCCAAGGATCCCTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTACTTGGCGCACACGCAGGGGA
AGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCTAAGGAGGCTCCTGCTCAACCTCAACCCCATAAGAGGAAGGTCTCTGTTCGCAAAACATTTGTGCTA
ATTACCTCCTTCCCTGGCATACTTTCAGTTAAAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGA
ATATCCTGAAATTGAAGACTTAGCAAAGCCTAGGCATCGGTTTATGTCCTCTTACGAGCAGCGTGTTCAACCTTTTGACAAAAGATACCAATATCTTCTGTTTGCAGCCG
AACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTG
TATTTCAAATCCAAGCCACAAGAGGCAAACAAGCCACCGCCTGTGCCCGCCGCCAATGGAACAGTGCCATCCGGTGCACCACCAAGGCCATTGCCGCCACCACCACAAGC
TCCACCACCGCCACCACCTCCACCCCAGCAAGGAGCACCACCAAGAGTTCCTCCTCCTCCGATGCCAGGGTCCTTGCCGCCTCCCCCTTCTGTAATGGCCAATGGTCCTC
CTAGGCCAATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCACCTCCAGTTGGCAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACCTCCCATG
CCGCCTCCTCCACAGGGCTTCCCAGGTCAGGGTATCCGGCAGCCACCACCACCACCCCCACCCAATATGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAGAGTGGGGGTCGAAGCCTGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATCGATCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGA
TCTCGCCAAGGATCCCTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTACTTGGCGCACACGCAGGGGA
AGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCTAAGGAGGCTCCTGCTCAACCTCAACCCCATAAGAGGAAGGTCTCTGTTCGCAAAACATTTGTGCTA
ATTACCTCCTTCCCTGGCATACTTTCAGTTAAAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGA
ATATCCTGAAATTGAAGACTTAGCAAAGCCTAGGCATCGGTTTATGTCCTCTTACGAGCAGCGTGTTCAACCTTTTGACAAAAGATACCAATATCTTCTGTTTGCAGCCG
AACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTG
TATTTCAAATCCAAGCCACAAGAGGCAAACAAGCCACCGCCTGTGCCCGCCGCCAATGGAACAGTGCCATCCGGTGCACCACCAAGGCCATTGCCGCCACCACCACAAGC
TCCACCACCGCCACCACCTCCACCCCAGCAAGGAGCACCACCAAGAGTTCCTCCTCCTCCGATGCCAGGGTCCTTGCCGCCTCCCCCTTCTGTAATGGCCAATGGTCCTC
CTAGGCCAATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCACCTCCAGTTGGCAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACCTCCCATG
CCGCCTCCTCCACAGGGCTTCCCAGGTCAGGGTATCCGGCAGCCACCACCACCACCCCCACCCAATATGGGATAG
Protein sequenceShow/hide protein sequence
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTFVL
ITSFPGILSVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQL
YFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPM
PPPPQGFPGQGIRQPPPPPPPNMG