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PI0012644 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012644
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:18117105..18117609
RNA-Seq ExpressionPI0012644
SyntenyPI0012644
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039587.1 hypothetical protein E6C27_scaffold744G00610 [Cucumis melo var. makuwa]1.1e-2263.46Show/hide
Query:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA
        SPL+DH +GL+EL SD SL GPHVVDST+EEV T KT ++K AEQSL P  LLEEI +GKM V GKDI   +PPSK    PK PL+KV STHA LK  E+
Subjt:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA

Query:  SLDT
         L+T
Subjt:  SLDT

KAA0040874.1 hypothetical protein E6C27_scaffold345G00270 [Cucumis melo var. makuwa]2.2e-2361.54Show/hide
Query:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA
        SPL+DH +G +EL SD SL+GPHVVDS +++V TSKT ++K A+QSL P  LL+EIRRGKM V GKD  I +PPSK    PK+PL+KV STHA LK  E+
Subjt:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA

Query:  SLDT
         LDT
Subjt:  SLDT

KAA0053996.1 hypothetical protein E6C27_scaffold318G00430 [Cucumis melo var. makuwa]2.2e-2360.36Show/hide
Query:  RRKERHQSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKDPKMPLEKVKSTHATLK
        R K  +QSPL++H +GL+ L SD SLIGPH +DS +EEV TSKT V+K AEQ L P  LLEEIRRGKMKV GKDIE S       K PL+KV  THA LK
Subjt:  RRKERHQSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKDPKMPLEKVKSTHATLK

Query:  IFEASLDTFEK
        IF   L+TF++
Subjt:  IFEASLDTFEK

KAA0060401.1 hypothetical protein E6C27_scaffold22G002130 [Cucumis melo var. makuwa]7.0e-2565.42Show/hide
Query:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA
        SPLDDH +GL+EL SD SL GPH VDS  EEV TSKT V KLAEQSLHP  LL+EIRRGKM V GKD+E  +P SK+   PK PL+KV STHA LK  E 
Subjt:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA

Query:  SLDTFEK
        SL    K
Subjt:  SLDTFEK

TYK16282.1 hypothetical protein E5676_scaffold21G00530 [Cucumis melo var. makuwa]4.2e-2259.81Show/hide
Query:  QSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD--PKMPLEKVKSTHATLKIFEA
        +S L+ H +GL+EL +D SL+GPHVVDS +EEV TSKTLV+K A++SL P +LLEEI R KMKV GKDIE S+P   D  PK+PL+KV ST A LK  E+
Subjt:  QSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD--PKMPLEKVKSTHATLKIFEA

Query:  SLDTFEK
         LD   K
Subjt:  SLDTFEK

TrEMBL top hitse value%identityAlignment
A0A5A7TBN8 Uncharacterized protein1.1e-2361.54Show/hide
Query:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA
        SPL+DH +G +EL SD SL+GPHVVDS +++V TSKT ++K A+QSL P  LL+EIRRGKM V GKD  I +PPSK    PK+PL+KV STHA LK  E+
Subjt:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA

Query:  SLDT
         LDT
Subjt:  SLDT

A0A5A7UI92 Uncharacterized protein1.1e-2360.36Show/hide
Query:  RRKERHQSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKDPKMPLEKVKSTHATLK
        R K  +QSPL++H +GL+ L SD SLIGPH +DS +EEV TSKT V+K AEQ L P  LLEEIRRGKMKV GKDIE S       K PL+KV  THA LK
Subjt:  RRKERHQSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKDPKMPLEKVKSTHATLK

Query:  IFEASLDTFEK
        IF   L+TF++
Subjt:  IFEASLDTFEK

A0A5D3BRC1 PMD domain-containing protein5.4e-2363.46Show/hide
Query:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA
        SPL+DH +GL+EL SD SL GPHVVDST+EEV T KT ++K AEQSL P  LLEEI +GKM V GKDI   +PPSK    PK PL+KV STHA LK  E+
Subjt:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA

Query:  SLDT
         L+T
Subjt:  SLDT

A0A5D3CXM9 Uncharacterized protein2.0e-2259.81Show/hide
Query:  QSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD--PKMPLEKVKSTHATLKIFEA
        +S L+ H +GL+EL +D SL+GPHVVDS +EEV TSKTLV+K A++SL P +LLEEI R KMKV GKDIE S+P   D  PK+PL+KV ST A LK  E+
Subjt:  QSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD--PKMPLEKVKSTHATLKIFEA

Query:  SLDTFEK
         LD   K
Subjt:  SLDTFEK

A0A5D3DEN0 Uncharacterized protein3.4e-2565.42Show/hide
Query:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA
        SPLDDH +GL+EL SD SL GPH VDS  EEV TSKT V KLAEQSLHP  LL+EIRRGKM V GKD+E  +P SK+   PK PL+KV STHA LK  E 
Subjt:  SPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKD---PKMPLEKVKSTHATLKIFEA

Query:  SLDTFEK
        SL    K
Subjt:  SLDTFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGATAGCAATAGAAGAAATCGTCATTGGAAGAGACCTTCGAAGAAAGGAAAGGCATCAGTCACCTTTGGACGATCATTTTCAAGGACTTGTAGAGCTATGTAG
TGATGGCTCTTTGATAGGGCCTCATGTTGTGGATTCGACCCTTGAAGAAGTTAGTACCTCAAAGACATTAGTTGCCAAACTAGCTGAACAATCCTTACATCCTCCTCTTC
TTCTCGAAGAGATTCGTCGAGGCAAGATGAAGGTGAATGGAAAAGACATCGAAATTTCAAATCCTCCATCCAAAGACCCGAAAATGCCTTTAGAGAAGGTCAAATCCACA
CATGCGACTCTCAAGATTTTCGAGGCGTCTTTAGACACTTTTGAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGATAGCAATAGAAGAAATCGTCATTGGAAGAGACCTTCGAAGAAAGGAAAGGCATCAGTCACCTTTGGACGATCATTTTCAAGGACTTGTAGAGCTATGTAG
TGATGGCTCTTTGATAGGGCCTCATGTTGTGGATTCGACCCTTGAAGAAGTTAGTACCTCAAAGACATTAGTTGCCAAACTAGCTGAACAATCCTTACATCCTCCTCTTC
TTCTCGAAGAGATTCGTCGAGGCAAGATGAAGGTGAATGGAAAAGACATCGAAATTTCAAATCCTCCATCCAAAGACCCGAAAATGCCTTTAGAGAAGGTCAAATCCACA
CATGCGACTCTCAAGATTTTCGAGGCGTCTTTAGACACTTTTGAGAAGTAG
Protein sequenceShow/hide protein sequence
MRVIAIEEIVIGRDLRRKERHQSPLDDHFQGLVELCSDGSLIGPHVVDSTLEEVSTSKTLVAKLAEQSLHPPLLLEEIRRGKMKVNGKDIEISNPPSKDPKMPLEKVKST
HATLKIFEASLDTFEK