; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012668 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012668
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:19813874..19814892
RNA-Seq ExpressionPI0012668
SyntenyPI0012668
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]1.4e-5747.86Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI
        MTN +I ++IDE DS +ATT  ++IHYIETS+ WSQWRD LAE + +     +++PKH WTKEE+  L ECLVELV++ GWRSDNG FRP Y + L +M+
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI

Query:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKV------------------------KRASRFEGF------
        A ++ G NI A+T D RIK++K+ F A++EMRGP+CSGF WNDE KCI+AEK++++ W                               R E F      
Subjt:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKV------------------------KRASRFEGF------

Query:  --PAYDGN------DMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREG
          P YD        D +FP MY  GL+MSPDD+M TR++R+SE +  SSGSKRKR G
Subjt:  --PAYDGN------DMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREG

KAA0036924.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-5746.95Show/hide
Query:  MTNTNIPNDIDEGDSMYA-TTGGEEIHYIETSSAWSQWRDELAERMFSDWEL--RNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQ
        MT  +   D DEGDS YA TT  E+I YIET++ WSQWRD LA  MF+DW +   N+ P+H WT+EE+  L ECL+ELVS  GW+SDNG FRP Y + L 
Subjt:  MTNTNIPNDIDEGDSMYA-TTGGEEIHYIETSSAWSQWRDELAERMFSDWEL--RNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQ

Query:  KMIAERMLGHNITATTT-DCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKVKRASR------------------------------
        +M+AE++ G  + ATT  DCRIK +K+ FQAI+EMRGP+CSGF WNDE KCI+AEK+L+++WV+   A++                              
Subjt:  KMIAERMLGHNITATTT-DCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKVKRASR------------------------------

Query:  -----------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKR
                   ++ F   DGN+ +FP +Y QG+D+S DD+  +R SR SE + GSSGSKRKR
Subjt:  -----------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKR

KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-6353.25Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRN------QVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS
        MTN +I ++IDE DS +ATT  ++IHYIE S+ W+QWRD+L E MF+DWELRN      ++PKH WTKEE+  L ECLVELV++ GWR DNG FRP Y +
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRN------QVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS

Query:  HLQKMIAERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------VKRASRFEGFPAYDGNDMEFPTMYIQGL
         L++M+  ++L  NI A+  D RIK++K+ F A++EMRGP+CSGF WNDE KCI+AEK+++N W+K          + ++ F A    DM+FP MY QGL
Subjt:  HLQKMIAERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------VKRASRFEGFPAYDGNDMEFPTMYIQGL

Query:  DMSPDDIMGTRSSRLSEAKAGSSGSKRKREG
        +MS DD+MGTR++ + E +  SSGSKRKR G
Subjt:  DMSPDDIMGTRSSRLSEAKAGSSGSKRKREG

KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]7.1e-4944.81Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQV------PKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS
        MTN+ I +D+DEGDS YATTGG+EI+YIE S+ WS+ RD+LA  MFSDWELR+Q+       KH WTKEE+  L ECLVELVS+ GWRS+NG FR  Y +
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQV------PKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS

Query:  HLQKMIAERMLGHNITAT-TTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK-----------------------------VKRA
         LQ+M+ +++   NI  +   DCR+K +KK   +   MRGPSCSGF WN++ +CIIAE+DL+++WVK                               R 
Subjt:  HLQKMIAERMLGHNITAT-TTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK-----------------------------VKRA

Query:  SRF------------EGFPAYDGNDMEFPTMYIQGLDMSPD
          F            +G P  D  D + P MY QG+ +SPD
Subjt:  SRF------------EGFPAYDGNDMEFPTMYIQGLDMSPD

KAA0060558.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-5244.62Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI
        MT  +I +DIDE DS +AT+  ++IHYIE S+ W+ WRD+LAE + +     +++PKH+WTKEE+  L ECL+ELV++ GWR DN  FRPRY + L +M+
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI

Query:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------------------------VKRASR----------
          ++ G NI A T D RIK++K+ F AI+EM G +CSGF WNDE KCI+AEK++++ WVK                          RA R          
Subjt:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------------------------VKRASR----------

Query:  ------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREGR
              +E F      D  F  MY QGL+MSPD++MGTR++R+SE +  SSGSKRKR G+
Subjt:  ------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREGR

TrEMBL top hitse value%identityAlignment
A0A5A7T091 Retrotransposon protein5.3e-5846.95Show/hide
Query:  MTNTNIPNDIDEGDSMYA-TTGGEEIHYIETSSAWSQWRDELAERMFSDWEL--RNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQ
        MT  +   D DEGDS YA TT  E+I YIET++ WSQWRD LA  MF+DW +   N+ P+H WT+EE+  L ECL+ELVS  GW+SDNG FRP Y + L 
Subjt:  MTNTNIPNDIDEGDSMYA-TTGGEEIHYIETSSAWSQWRDELAERMFSDWEL--RNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQ

Query:  KMIAERMLGHNITATTT-DCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKVKRASR------------------------------
        +M+AE++ G  + ATT  DCRIK +K+ FQAI+EMRGP+CSGF WNDE KCI+AEK+L+++WV+   A++                              
Subjt:  KMIAERMLGHNITATTT-DCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKVKRASR------------------------------

Query:  -----------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKR
                   ++ F   DGN+ +FP +Y QG+D+S DD+  +R SR SE + GSSGSKRKR
Subjt:  -----------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKR

A0A5A7TDD6 Retrotransposon protein4.9e-6453.25Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRN------QVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS
        MTN +I ++IDE DS +ATT  ++IHYIE S+ W+QWRD+L E MF+DWELRN      ++PKH WTKEE+  L ECLVELV++ GWR DNG FRP Y +
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRN------QVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS

Query:  HLQKMIAERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------VKRASRFEGFPAYDGNDMEFPTMYIQGL
         L++M+  ++L  NI A+  D RIK++K+ F A++EMRGP+CSGF WNDE KCI+AEK+++N W+K          + ++ F A    DM+FP MY QGL
Subjt:  HLQKMIAERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------VKRASRFEGFPAYDGNDMEFPTMYIQGL

Query:  DMSPDDIMGTRSSRLSEAKAGSSGSKRKREG
        +MS DD+MGTR++ + E +  SSGSKRKR G
Subjt:  DMSPDDIMGTRSSRLSEAKAGSSGSKRKREG

A0A5A7TJS2 Retrotransposon protein3.4e-4944.81Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQV------PKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS
        MTN+ I +D+DEGDS YATTGG+EI+YIE S+ WS+ RD+LA  MFSDWELR+Q+       KH WTKEE+  L ECLVELVS+ GWRS+NG FR  Y +
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQV------PKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHS

Query:  HLQKMIAERMLGHNITAT-TTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK-----------------------------VKRA
         LQ+M+ +++   NI  +   DCR+K +KK   +   MRGPSCSGF WN++ +CIIAE+DL+++WVK                               R 
Subjt:  HLQKMIAERMLGHNITAT-TTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK-----------------------------VKRA

Query:  SRF------------EGFPAYDGNDMEFPTMYIQGLDMSPD
          F            +G P  D  D + P MY QG+ +SPD
Subjt:  SRF------------EGFPAYDGNDMEFPTMYIQGLDMSPD

A0A5D3BRF0 Retrotransposon protein6.7e-5344.62Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI
        MT  +I +DIDE DS +AT+  ++IHYIE S+ W+ WRD+LAE + +     +++PKH+WTKEE+  L ECL+ELV++ GWR DN  FRPRY + L +M+
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI

Query:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------------------------VKRASR----------
          ++ G NI A T D RIK++K+ F AI+EM G +CSGF WNDE KCI+AEK++++ WVK                          RA R          
Subjt:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVK------------------------VKRASR----------

Query:  ------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREGR
              +E F      D  F  MY QGL+MSPD++MGTR++R+SE +  SSGSKRKR G+
Subjt:  ------FEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREGR

E5GCB5 Retrotransposon protein6.9e-5847.86Show/hide
Query:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI
        MTN +I ++IDE DS +ATT  ++IHYIETS+ WSQWRD LAE + +     +++PKH WTKEE+  L ECLVELV++ GWRSDNG FRP Y + L +M+
Subjt:  MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMI

Query:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKV------------------------KRASRFEGF------
        A ++ G NI A+T D RIK++K+ F A++EMRGP+CSGF WNDE KCI+AEK++++ W                               R E F      
Subjt:  AERMLGHNITATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKV------------------------KRASRFEGF------

Query:  --PAYDGN------DMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREG
          P YD        D +FP MY  GL+MSPDD+M TR++R+SE +  SSGSKRKR G
Subjt:  --PAYDGN------DMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACACTAACATACCGAACGACATTGATGAGGGTGACTCTATGTACGCCACCACTGGTGGTGAAGAAATTCACTACATAGAGACGTCAAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGGTCCCGAAGCACCACTGGACGAAAGAGGAGGATGTCGTCCTCTTTGAATGTCTGGTGG
AGTTGGTATCATCCGACGGGTGGAGGTCGGATAACGGGATGTTTAGACCCAGGTACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCTGGGACATAACATAACG
GCTACGACAACAGATTGTCGAATCAAGATAATAAAAAAAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGATTGGAATGATGAGCTGAAATG
CATCATTGCTGAGAAAGACTTGTATAACAGTTGGGTGAAGGTCAAACGTGCCTCCAGGTTCGAAGGATTTCCCGCGTATGATGGGAACGATATGGAGTTCCCGACGATGT
ACATTCAGGGCCTGGACATGTCACCTGACGACATAATGGGTACACGATCGAGTCGTTTGTCTGAGGCTAAGGCTGGTTCGAGCGGGTCGAAGAGGAAACGGGAAGGCAGG
CATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACACTAACATACCGAACGACATTGATGAGGGTGACTCTATGTACGCCACCACTGGTGGTGAAGAAATTCACTACATAGAGACGTCAAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCGTAATCAGGTCCCGAAGCACCACTGGACGAAAGAGGAGGATGTCGTCCTCTTTGAATGTCTGGTGG
AGTTGGTATCATCCGACGGGTGGAGGTCGGATAACGGGATGTTTAGACCCAGGTACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCTGGGACATAACATAACG
GCTACGACAACAGATTGTCGAATCAAGATAATAAAAAAAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGCAGTGGGTTCGATTGGAATGATGAGCTGAAATG
CATCATTGCTGAGAAAGACTTGTATAACAGTTGGGTGAAGGTCAAACGTGCCTCCAGGTTCGAAGGATTTCCCGCGTATGATGGGAACGATATGGAGTTCCCGACGATGT
ACATTCAGGGCCTGGACATGTCACCTGACGACATAATGGGTACACGATCGAGTCGTTTGTCTGAGGCTAAGGCTGGTTCGAGCGGGTCGAAGAGGAAACGGGAAGGCAGG
CATTGA
Protein sequenceShow/hide protein sequence
MTNTNIPNDIDEGDSMYATTGGEEIHYIETSSAWSQWRDELAERMFSDWELRNQVPKHHWTKEEDVVLFECLVELVSSDGWRSDNGMFRPRYHSHLQKMIAERMLGHNIT
ATTTDCRIKIIKKAFQAISEMRGPSCSGFDWNDELKCIIAEKDLYNSWVKVKRASRFEGFPAYDGNDMEFPTMYIQGLDMSPDDIMGTRSSRLSEAKAGSSGSKRKREGR
H