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PI0012676 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012676
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr08:2667873..2669882
RNA-Seq ExpressionPI0012676
SyntenyPI0012676
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038417.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]1.7e-4454.64Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQD
        YYPSTY E KRD+FLG KQG LSV EYE+KYTELSRYA+VIVASESD+CR  DCP+CGAEYN  E                 G EQ RFTP +N+S RQD
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQD

Query:  FKSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED
        FK+RSGGQ+ R +S GS +Q Q             R Q  QE VAS  ++TPC S GRNHRGQCL+            H K+DCPQL   VQ D
Subjt:  FKSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED

KAA0040646.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.8e-3951.3Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQDF
        YYPSTY E KRD+FLG KQG LSVAEYE+KYTELSRYANVIVASESD+CRR     G  + + E                 G EQ RFTP +N+S RQDF
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQDF

Query:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED
        K+RS GQ+ R +S GS +Q Q             R Q  QE +AS  +RTPC S GRNHRGQCL+            HFK+DCPQL   ++ D
Subjt:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED

KAA0045449.1 reverse transcriptase [Cucumis melo var. makuwa]6.9e-3857.5Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGEV--------------NGHEQWRFTPEVNVSGRQDF
        YYPSTY E KRD+FLG KQG LSVAEYE+KYTELSRYA+VIVASESD+CR  DCP+CGAEYN  E+               G EQ RFTP +N+S  QDF
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGEV--------------NGHEQWRFTPEVNVSGRQDF

Query:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHR
        K+RSGGQ+   MS GS +Q Q             R Q  QE +AS  +RTPC S GRNHR
Subjt:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHR

KAA0046124.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.3e-3646.7Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-----------------DCPT-------------------CGAEYNMGE
        YYPSTY E KRD+FLG KQG LSVAEYEKKYTELSRYA+VIVASESD+CRR                  C                        E + G 
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-----------------DCPT-------------------CGAEYNMGE

Query:  -----VNGHEQWRFTPEVNVSGRQDFKSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM---------
              +G EQWRFTP +N+S RQDFK+RSGG++ R +S GS +Q Q             R Q  QE +A   +RTPC S GRNHRGQCL+         
Subjt:  -----VNGHEQWRFTPEVNVSGRQDFKSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM---------

Query:  ---HFKRDCPQL
           HFK+DCPQL
Subjt:  ---HFKRDCPQL

KAA0053247.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.0e-3851.06Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGEVN----------GHEQWRFTPEVNVSGRQDFKSRSG
        YYPSTY E KRD+FLG KQG L VAEYE+KYTE+SRYA+VIVA ESD+CR    +   E ++ E++          G EQ RFTP +N+S RQDFK+RSG
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGEVN----------GHEQWRFTPEVNVSGRQDFKSRSG

Query:  GQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED
        G++ R MS GS +Q Q             R Q  QE +AS+ +RT C S GRNHRGQCL+            HFK+DCPQL   VQ D
Subjt:  GQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED

TrEMBL top hitse value%identityAlignment
A0A0A0KFN3 Uncharacterized protein8.5e-4256.98Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR------DCPTCGAEYNMGEVNGHEQWRFTPEVNVSGRQDFKSRSGGQSL
        YYP TY E  RD+FLG KQG +SVAEYE+KYTELSRYANVI+ASES++C+R      DC +CG EYN+ E++  EQ RFTP V  S RQDFK+RS GQ+ 
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR------DCPTCGAEYNMGEVNGHEQWRFTPEVNVSGRQDFKSRSGGQSL

Query:  RQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLMHFKRDCPQLRAAVQED
        R MS GS +Q Q             RPQ  +EFVAS  +RTPC S G+NHRG    HFK+D PQL   VQ+D
Subjt:  RQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLMHFKRDCPQLRAAVQED

A0A5A7TA17 Putative gag-pol polyprotein8.2e-4554.64Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQD
        YYPSTY E KRD+FLG KQG LSV EYE+KYTELSRYA+VIVASESD+CR  DCP+CGAEYN  E                 G EQ RFTP +N+S RQD
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQD

Query:  FKSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED
        FK+RSGGQ+ R +S GS +Q Q             R Q  QE VAS  ++TPC S GRNHRGQCL+            H K+DCPQL   VQ D
Subjt:  FKSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED

A0A5A7TF49 DNA/RNA polymerases superfamily protein1.4e-3951.3Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQDF
        YYPSTY E KRD+FLG KQG LSVAEYE+KYTELSRYANVIVASESD+CRR     G  + + E                 G EQ RFTP +N+S RQDF
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGE---------------VNGHEQWRFTPEVNVSGRQDF

Query:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED
        K+RS GQ+ R +S GS +Q Q             R Q  QE +AS  +RTPC S GRNHRGQCL+            HFK+DCPQL   ++ D
Subjt:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED

A0A5A7TW42 Reverse transcriptase3.3e-3857.5Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGEV--------------NGHEQWRFTPEVNVSGRQDF
        YYPSTY E KRD+FLG KQG LSVAEYE+KYTELSRYA+VIVASESD+CR  DCP+CGAEYN  E+               G EQ RFTP +N+S  QDF
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRR-DCPTCGAEYNMGEV--------------NGHEQWRFTPEVNVSGRQDF

Query:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHR
        K+RSGGQ+   MS GS +Q Q             R Q  QE +AS  +RTPC S GRNHR
Subjt:  KSRSGGQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHR

A0A5A7UFH6 DNA/RNA polymerases superfamily protein2.0e-3851.06Show/hide
Query:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGEVN----------GHEQWRFTPEVNVSGRQDFKSRSG
        YYPSTY E KRD+FLG KQG L VAEYE+KYTE+SRYA+VIVA ESD+CR    +   E ++ E++          G EQ RFTP +N+S RQDFK+RSG
Subjt:  YYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGEVN----------GHEQWRFTPEVNVSGRQDFKSRSG

Query:  GQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED
        G++ R MS GS +Q Q             R Q  QE +AS+ +RT C S GRNHRGQCL+            HFK+DCPQL   VQ D
Subjt:  GQSLRQMSSGSAYQGQ-------------RPQAVQEFVASVTKRTPCASYGRNHRGQCLM------------HFKRDCPQLRAAVQED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACTTCATGCTATTATCCCAGCACATACTTTGAGGTAAAGAGGGACAAGTTTCTGGGGTGGAAGCAGGGGCCACTTTCAGTGGCCGAGTATGAAAAGAAGTATAC
CGAGCTTTCACGGTATGCTAATGTGATTGTGGCATCTGAGAGTGACAAGTGCCGAAGAGACTGTCCTACGTGTGGAGCAGAGTATAACATGGGAGAAGTCAATGGTCATG
AGCAATGGAGGTTTACACCTGAAGTGAATGTTTCAGGCCGTCAAGACTTTAAGAGTCGGTCTGGTGGTCAATCATTGAGGCAGATGAGCTCAGGTAGTGCCTATCAGGGG
CAGAGACCGCAGGCAGTTCAAGAATTCGTCGCTAGCGTGACCAAGCGAACCCCATGTGCGAGTTATGGCAGGAATCATCGGGGTCAATGCCTTATGCATTTTAAGAGAGA
TTGTCCACAGTTGAGAGCAGCAGTTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGACTTCATGCTATTATCCCAGCACATACTTTGAGGTAAAGAGGGACAAGTTTCTGGGGTGGAAGCAGGGGCCACTTTCAGTGGCCGAGTATGAAAAGAAGTATAC
CGAGCTTTCACGGTATGCTAATGTGATTGTGGCATCTGAGAGTGACAAGTGCCGAAGAGACTGTCCTACGTGTGGAGCAGAGTATAACATGGGAGAAGTCAATGGTCATG
AGCAATGGAGGTTTACACCTGAAGTGAATGTTTCAGGCCGTCAAGACTTTAAGAGTCGGTCTGGTGGTCAATCATTGAGGCAGATGAGCTCAGGTAGTGCCTATCAGGGG
CAGAGACCGCAGGCAGTTCAAGAATTCGTCGCTAGCGTGACCAAGCGAACCCCATGTGCGAGTTATGGCAGGAATCATCGGGGTCAATGCCTTATGCATTTTAAGAGAGA
TTGTCCACAGTTGAGAGCAGCAGTTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MQTSCYYPSTYFEVKRDKFLGWKQGPLSVAEYEKKYTELSRYANVIVASESDKCRRDCPTCGAEYNMGEVNGHEQWRFTPEVNVSGRQDFKSRSGGQSLRQMSSGSAYQG
QRPQAVQEFVASVTKRTPCASYGRNHRGQCLMHFKRDCPQLRAAVQED