CuGenDBv2

Gene ID	PI0012679
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr04:15055065..15055984
RNA-Seq Expression	PI0012679
Synteny	PI0012679
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.8e-69

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

KAA0059998.1 putative polyprotein [Cucumis melo var. makuwa]

1.0e-69

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  T +Q      S LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.8e-69

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.8e-69

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

TYK13763.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.0e-69

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UXP1 Putative polyprotein

5.0e-70

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  T +Q      S LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

A0A5A7VLQ7 Beta-galactosidase

8.6e-70

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

A0A5D3BJK7 Beta-galactosidase

8.6e-70

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

A0A5D3C4T4 Beta-galactosidase

8.6e-70

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

A0A5D3CPE0 Beta-galactosidase

5.0e-70

73.66

Show/hide

Query:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP
        MDLCR+ VWDT NDS Q+AK+EEADRVYDFLAGL+PKFD VCGRI GQR L SLMEVC++VRLEEDRTNAMGVLTTPT D+AAFSA SSN D +KNNGK 
Subjt:  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKP

Query:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS
        +P CEHCKK WHTKD+CWKLHGRPPGGKK SSN+KQ+S RAY+SE+T   TSQ +  TV+Q        LGA+ QSGMPQSL LIS
Subjt:  VPTCEHCKKPWHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSEST--GTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATCTATGTAGAGACATTGTTTGGGATACTTCTAATGACAGTTTGCAGTTTGCCAAGATAGAAGAAGCGGACCGTGTGTATGATTTTCTTGCCGGCCTCCATCCTAA
GTTTGATACTGTTTGTGGTCGTATCTTTGGCCAAAGGCTTCTTTCGTCCCTGATGGAAGTCTGCTATAAAGTCCGTCTTGAAGAAGATCGCACGAATGCCATGGGTGTCC
TAACTACTCCTACCACTGACACTGCCGCCTTTAGTGCTCACTCATCCAACCTCGATCATGAAAAAAATAATGGTAAACCAGTTCCCACCTGTGAGCACTGTAAGAAACCA
TGGCACACTAAAGATCGGTGTTGGAAGCTTCATGGACGTCCTCCAGGAGGTAAGAAATGCTCCTCCAATGACAAACAGAGTTCTAAACGTGCCTACATGAGTGAGTCTAC
GGGAACATCTCAACCGTCTGGTATTACTGTTAACCAGAAAGGTCCTAATTCACCCTCCGAGTTAGGAGCCCTTACTCAGTCAGGTATGCCTCAGTCCCTTAGTCTTATTA
GCTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLAGLHPKFDTVCGRIFGQRLLSSLMEVCYKVRLEEDRTNAMGVLTTPTTDTAAFSAHSSNLDHEKNNGKPVPTCEHCKKP
WHTKDRCWKLHGRPPGGKKCSSNDKQSSKRAYMSESTGTSQPSGITVNQKGPNSPSELGALTQSGMPQSLSLIS

PI0012679 (gene) of Melon (PI 482460) v1 genome