; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012714 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012714
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:6726871..6733461
RNA-Seq ExpressionPI0012714
SyntenyPI0012714
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]2.7e-5866.48Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVC L+ HPNDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEE  + N S  + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

KAA0038454.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.0e-5766.48Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVC L+ H NDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKLPAQPDHANVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEE  + N S  + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.8e-5764.84Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+ HPNDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+  QA S+S+NQGTNLED++KALATNT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPSEEKVSSSLDLLIN-ENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKL AQ ++ANVSA+SLR+GKIL  P ++EK ++S  L +N +N+ KEE  + N S  + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPSEEKVSSSLDLLIN-ENKKKEENKQNNASSPSPKD

KAA0065554.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-5766.48Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQP-QATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+ HPNDK P+++E+ N++R+YDP GNTYN+ WRDNP LRWGN+NQ+  QA S+S+NQGTNLED++KALA NT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQP-QATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKLPAQP+HANVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEEN + N   PSP +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]8.0e-5865.38Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+ +PNDKCP ++E+ N++R+YDP GNTYN  WRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEE  + N+SS + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032913.9e-5865.38Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+ +PNDKCP ++E+ N++R+YDP GNTYN  WRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEE  + N+SS + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

A0A5A7T4R3 Retrotransposon gag protein1.5e-5766.48Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVC L+ H NDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKLPAQPDHANVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEE  + N S  + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

A0A5A7VE49 Retrotransposon gag protein8.6e-5866.48Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQP-QATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+ HPNDK P+++E+ N++R+YDP GNTYN+ WRDNP LRWGN+NQ+  QA S+S+NQGTNLED++KALA NT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQP-QATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKLPAQP+HANVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEEN + N   PSP +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

A0A5D3CRR8 Retrotransposon gag protein3.3e-5764.84Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+ HPNDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+  QA S+S+NQGTNLED++KALATNT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPSEEKVSSSLDLLIN-ENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKL AQ ++ANVSA+SLR+GKIL  P ++EK ++S  L +N +N+ KEE  + N S  + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPSEEKVSSSLDLLIN-ENKKKEENKQNNASSPSPKD

E5GBZ4 Retrotransposon gag protein1.3e-5866.48Show/hide
Query:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KV KCGVC L+ HPNDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQ-PQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVSAISLR+GKIL  P + E+KV+S L  L ++N+ KEE  + N S  + K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPS-EEKVSSSLDLLINENKKKEENKQNNASSPSPKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAATTGCTTACTTCTTTTGTTCAAGGCGGAAATGTAAAAGTTGCCAAATGTGGAGTTTGCGGATTAATAAGACATCCTAATGACAAGTGCCCTGACCTAGTGGA
AGAGGCAAATGTCATTAGGAAGTATGATCCTCAAGGAAATACTTACAATGCCGATTGGAGAGATAATCCCAACCTTAGATGGGGAAACAACAATCAACAACCACAAGCAA
CTTCTTCCTCAAATAATCAAGGTACAAATTTAGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATTTCTTTTCAGAATGAAATGAAACAACAGATGTCTCAATTAACC
AATGCAATAAGTAAGTTAGAAGGCAAAGGTAAGCTGCCTGCTCAGCCTGACCACGCAAACGTAAGTGCCATCTCACTTAGAAACGGTAAAATTCTGCAACCTCCTCCAAG
TGAAGAAAAGGTATCTTCTAGCCTTGACCTTCTAATTAATGAAAATAAGAAAAAGGAAGAAAATAAACAAAACAATGCCTCTTCTCCTTCTCCAAAAGACTGCCTTCTTC
GCGAGGCAAGTTCTTCACAACCAGAGCTCCGCGAGATACTTCATCTGCAGAAGTACATATCCATGCCGCGCAACGCAAACATTTGTTCGCCAACTCACCAAGTCAAGCTC
ACTTACCCGAAACGCATGAAGTCTGCAATCAGCTCGCAACCAGCTCGCATAACGCATCATTCTTCTCAATCAGCTCGCAAATCTTCTGATCGCCTAAAAACGGTTATTAT
AACCGCCGAGCCCAAGCCCACGGCCCAAGCCCATTGTAGCAAAATAACCGCCAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCAATTGCTTACTTCTTTTGTTCAAGGCGGAAATGTAAAAGTTGCCAAATGTGGAGTTTGCGGATTAATAAGACATCCTAATGACAAGTGCCCTGACCTAGTGGA
AGAGGCAAATGTCATTAGGAAGTATGATCCTCAAGGAAATACTTACAATGCCGATTGGAGAGATAATCCCAACCTTAGATGGGGAAACAACAATCAACAACCACAAGCAA
CTTCTTCCTCAAATAATCAAGGTACAAATTTAGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATTTCTTTTCAGAATGAAATGAAACAACAGATGTCTCAATTAACC
AATGCAATAAGTAAGTTAGAAGGCAAAGGTAAGCTGCCTGCTCAGCCTGACCACGCAAACGTAAGTGCCATCTCACTTAGAAACGGTAAAATTCTGCAACCTCCTCCAAG
TGAAGAAAAGGTATCTTCTAGCCTTGACCTTCTAATTAATGAAAATAAGAAAAAGGAAGAAAATAAACAAAACAATGCCTCTTCTCCTTCTCCAAAAGACTGCCTTCTTC
GCGAGGCAAGTTCTTCACAACCAGAGCTCCGCGAGATACTTCATCTGCAGAAGTACATATCCATGCCGCGCAACGCAAACATTTGTTCGCCAACTCACCAAGTCAAGCTC
ACTTACCCGAAACGCATGAAGTCTGCAATCAGCTCGCAACCAGCTCGCATAACGCATCATTCTTCTCAATCAGCTCGCAAATCTTCTGATCGCCTAAAAACGGTTATTAT
AACCGCCGAGCCCAAGCCCACGGCCCAAGCCCATTGTAGCAAAATAACCGCCAAATAG
Protein sequenceShow/hide protein sequence
MTQLLTSFVQGGNVKVAKCGVCGLIRHPNDKCPDLVEEANVIRKYDPQGNTYNADWRDNPNLRWGNNNQQPQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLT
NAISKLEGKGKLPAQPDHANVSAISLRNGKILQPPPSEEKVSSSLDLLINENKKKEENKQNNASSPSPKDCLLREASSSQPELREILHLQKYISMPRNANICSPTHQVKL
TYPKRMKSAISSQPARITHHSSQSARKSSDRLKTVIITAEPKPTAQAHCSKITAK