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PI0012760 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012760
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:15258816..15260463
RNA-Seq ExpressionPI0012760
SyntenyPI0012760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]2.2e-3163.16Show/hide
Query:  SSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNT
        SSYNQI   LD++  NNEEWD+D F + RGGRG+NEEGLD++V+V  QGQMTAMNNLL+ MV  QVN A SS Q+V Q+DE+GC+    PH  D CP+N 
Subjt:  SSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNT

Query:  ETVAYVRNDPYSNT
        E VAYV++DPYSNT
Subjt:  ETVAYVRNDPYSNT

KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]5.2e-2838.8Show/hide
Query:  MLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCP
        ML+SSY QIK  LD +T+N++E  +DD   +   RGR + G+D++V+V+LQGQ+T M  LL+SM +SQV+   + +QAV Q+DEM  VGC +PH TD C 
Subjt:  MLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCP

Query:  MNTETVAYVRNDPYSNTTTL-NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPS-------LLHPHPHQWKT-SSANTCRR
        +N E  AYV++ PYSNT    N  GE                A  H    Q      H + PQH       PS       LL  +  +      + T   
Subjt:  MNTETVAYVRNDPYSNTTTL-NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPS-------LLHPHPHQWKT-SSANTCRR

Query:  MMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN
        +     LGQ+A DFSGRP GSLPSN ++P+   G  K K      R E++
Subjt:  MMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN

KAA0047821.1 uncharacterized protein E6C27_scaffold133G00730 [Cucumis melo var. makuwa]8.0e-2139.56Show/hide
Query:  LDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTI
        ++K  +V+L GQ+T MN LL+SMV S                             ++ P+ T  V  +            L GE R  KIKDD+VV+V I
Subjt:  LDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTI

Query:  AVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN
         V HLAI +     DH    QH N NN+  +LLHP PH WK          + F KL Q+A DF G+P GSLPSN+++P Q  GSRKEKCQ  TLRSER 
Subjt:  AVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN

Query:  LTIRDAETERKNPASISTAKISSTS
        + I D   E +N  S   AK ++ S
Subjt:  LTIRDAETERKNPASISTAKISSTS

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]5.5e-3045.45Show/hide
Query:  GGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNR------RGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDD
        GGML+SSYNQIK MLDTM SN++EW ++ FG+R      +G RGR E+G+D S++V+LQGQ+  M N+L+SM + QVN+  SS+Q V Q++EMGCVGC  
Subjt:  GGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNR------RGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDD

Query:  PHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNN
        PHNT+ CP+NTE VAY++NDP      +  GGE         ++     ++ ++ +  G  T D + RP+    +N
Subjt:  PHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNN

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]1.4e-2044.93Show/hide
Query:  QVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVR-------NDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNR
        QVN A S + A+ Q+ E+GCVGC+ PHNT+ CP N E  A+V+       ND + N    + G + ++  +K  + VK+ IA  HLAI++G T  DH  +
Subjt:  QVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVR-------NDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNR

Query:  PQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKL
             T N+ P L HP+P QWK  SANTCR MMPFCK+
Subjt:  PQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKL

TrEMBL top hitse value%identityAlignment
A0A5A7U2P4 Integrase catalytic domain-containing protein3.9e-2139.56Show/hide
Query:  LDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTI
        ++K  +V+L GQ+T MN LL+SMV S                             ++ P+ T  V  +            L GE R  KIKDD+VV+V I
Subjt:  LDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTI

Query:  AVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN
         V HLAI +     DH    QH N NN+  +LLHP PH WK          + F KL Q+A DF G+P GSLPSN+++P Q  GSRKEKCQ  TLRSER 
Subjt:  AVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN

Query:  LTIRDAETERKNPASISTAKISSTS
        + I D   E +N  S   AK ++ S
Subjt:  LTIRDAETERKNPASISTAKISSTS

A0A5D3CC26 Uncharacterized protein2.7e-3045.45Show/hide
Query:  GGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNR------RGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDD
        GGML+SSYNQIK MLDTM SN++EW ++ FG+R      +G RGR E+G+D S++V+LQGQ+  M N+L+SM + QVN+  SS+Q V Q++EMGCVGC  
Subjt:  GGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNR------RGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDD

Query:  PHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNN
        PHNT+ CP+NTE VAY++NDP      +  GGE         ++     ++ ++ +  G  T D + RP+    +N
Subjt:  PHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNN

A0A5D3CGY4 Uncharacterized protein6.6e-2144.93Show/hide
Query:  QVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVR-------NDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNR
        QVN A S + A+ Q+ E+GCVGC+ PHNT+ CP N E  A+V+       ND + N    + G + ++  +K  + VK+ IA  HLAI++G T  DH  +
Subjt:  QVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVR-------NDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNR

Query:  PQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKL
             T N+ P L HP+P QWK  SANTCR MMPFCK+
Subjt:  PQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKL

A0A5D3CSC7 Uncharacterized protein1.1e-3163.16Show/hide
Query:  SSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNT
        SSYNQI   LD++  NNEEWD+D F + RGGRG+NEEGLD++V+V  QGQMTAMNNLL+ MV  QVN A SS Q+V Q+DE+GC+    PH  D CP+N 
Subjt:  SSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNT

Query:  ETVAYVRNDPYSNT
        E VAYV++DPYSNT
Subjt:  ETVAYVRNDPYSNT

A0A5D3D2S0 Uncharacterized protein2.5e-2838.8Show/hide
Query:  MLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCP
        ML+SSY QIK  LD +T+N++E  +DD   +   RGR + G+D++V+V+LQGQ+T M  LL+SM +SQV+   + +QAV Q+DEM  VGC +PH TD C 
Subjt:  MLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCP

Query:  MNTETVAYVRNDPYSNTTTL-NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPS-------LLHPHPHQWKT-SSANTCRR
        +N E  AYV++ PYSNT    N  GE                A  H    Q      H + PQH       PS       LL  +  +      + T   
Subjt:  MNTETVAYVRNDPYSNTTTL-NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPS-------LLHPHPHQWKT-SSANTCRR

Query:  MMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN
        +     LGQ+A DFSGRP GSLPSN ++P+   G  K K      R E++
Subjt:  MMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATGATGAACAACCCGAATTTGAGCTTGACCTTGAAAGTGAACGAACTTTTCGACGTAACAGAAAAAGAGGGAGGCAACGAAGAGCAAATAGAATGGCTAACAA
CAACAACCAGAATGTTCCTCCCCAACAAACTGCCCAAGAACAGAATGTTGCCTACAAGGCTCATGATTTAGATAGACCAATTAGGTCGTATGCTTCACCAAATCTCTATA
ACTTTAGCCTAGTGATCGCCTACCCTGTGTTCGGGGGCATGTTGAAAAGCTCATACAACCAGATCAAGGCGATGCTGGATACGATGACCAGCAATAATGAAGAATGGGAT
GAAGATGATTTCGGCAATCGCCGAGGAGGAAGAGGAAGAAACGAGGAAGGATTAGATAAGAGCGTCGTGGTGTCGTTGCAAGGACAAATGACTGCGATGAATAATCTGTT
GAAATCAATGGTGATTTCGCAAGTTAACATGGCCGACAGCTCTATTCAAGCGGTCAATCAATTAGATGAAATGGGATGCGTGGGATGCGACGATCCTCACAACACCGACG
TGTGCCCAATGAATACAGAGACAGTCGCATACGTCAGGAATGACCCTTACTCTAACACAACCACCCTAAATTTGGGTGGGGAGGAACGGGTCAACAAAATCAAGGATGAT
AAGGTGGTCAAGGTGACCATCGCGGTGAGTCATCTGGCTATTACCCAAGGCACCACAACAATAGACCATAACAATAGACCACAACATCCCAACACCAACAATAGAAAACC
ATCACTACTCCATCCTCATCCTCATCAATGGAAAACCTCCTCCGCGAATACATGCAGAAGAATGATGCCCTTCTGCAAATTGGGGCAGATGGCCAGTGATTTCTCTGGAA
GGCCACAAGGATCACTCCCAAGCAACAGTCAAATGCCTAGTCAGGCGGAAGGATCCAGAAAAGAGAAGTGTCAAACAAGAACACTGCGCAGCGAAAGGAATTTGACCATT
CGTGATGCTGAAACTGAACGTAAAAACCCCGCTTCTATTTCTACTGCTAAGATCAGCAGCACAAGTAATAATTCCGATCTCTTAAATTTCTCTTTAACTAACAATGTTTC
TTCCTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATGATGAACAACCCGAATTTGAGCTTGACCTTGAAAGTGAACGAACTTTTCGACGTAACAGAAAAAGAGGGAGGCAACGAAGAGCAAATAGAATGGCTAACAA
CAACAACCAGAATGTTCCTCCCCAACAAACTGCCCAAGAACAGAATGTTGCCTACAAGGCTCATGATTTAGATAGACCAATTAGGTCGTATGCTTCACCAAATCTCTATA
ACTTTAGCCTAGTGATCGCCTACCCTGTGTTCGGGGGCATGTTGAAAAGCTCATACAACCAGATCAAGGCGATGCTGGATACGATGACCAGCAATAATGAAGAATGGGAT
GAAGATGATTTCGGCAATCGCCGAGGAGGAAGAGGAAGAAACGAGGAAGGATTAGATAAGAGCGTCGTGGTGTCGTTGCAAGGACAAATGACTGCGATGAATAATCTGTT
GAAATCAATGGTGATTTCGCAAGTTAACATGGCCGACAGCTCTATTCAAGCGGTCAATCAATTAGATGAAATGGGATGCGTGGGATGCGACGATCCTCACAACACCGACG
TGTGCCCAATGAATACAGAGACAGTCGCATACGTCAGGAATGACCCTTACTCTAACACAACCACCCTAAATTTGGGTGGGGAGGAACGGGTCAACAAAATCAAGGATGAT
AAGGTGGTCAAGGTGACCATCGCGGTGAGTCATCTGGCTATTACCCAAGGCACCACAACAATAGACCATAACAATAGACCACAACATCCCAACACCAACAATAGAAAACC
ATCACTACTCCATCCTCATCCTCATCAATGGAAAACCTCCTCCGCGAATACATGCAGAAGAATGATGCCCTTCTGCAAATTGGGGCAGATGGCCAGTGATTTCTCTGGAA
GGCCACAAGGATCACTCCCAAGCAACAGTCAAATGCCTAGTCAGGCGGAAGGATCCAGAAAAGAGAAGTGTCAAACAAGAACACTGCGCAGCGAAAGGAATTTGACCATT
CGTGATGCTGAAACTGAACGTAAAAACCCCGCTTCTATTTCTACTGCTAAGATCAGCAGCACAAGTAATAATTCCGATCTCTTAAATTTCTCTTTAACTAACAATGTTTC
TTCCTCGTAA
Protein sequenceShow/hide protein sequence
MNDDEQPEFELDLESERTFRRNRKRGRQRRANRMANNNNQNVPPQQTAQEQNVAYKAHDLDRPIRSYASPNLYNFSLVIAYPVFGGMLKSSYNQIKAMLDTMTSNNEEWD
EDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDD
KVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERNLTI
RDAETERKNPASISTAKISSTSNNSDLLNFSLTNNVSSS