; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012761 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012761
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:13943319..13944831
RNA-Seq ExpressionPI0012761
SyntenyPI0012761
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]2.0e-8881.22Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        MT+NSQ+FGNRA ELDN LTKEVSELKSQMLNMTTL TSFVQG PLKV KCGVC LVGHPNDKCP++IEDVN++RKYDP+GNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK TQA  +SSNQG NLED++K LATNTLSFQQEMKQQMTQLTTAISK++GKGKL AQPD+ANVSAISLRSGKIL+TP+++EKKVTS  + L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.1e-8980.75Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSF NRASELDNSLTKEVSELKSQMLNMTTL TSFVQG PLKV KCGVCGLVGHPNDKCP++IEDVN++RKYDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK TQA S+SSNQG NLED++K LATNTLSFQQEMKQQMTQLTTAISK++GKGKLSAQ ++ANVSA+SLRSGKIL+TP+++EKK TS P+ L  ++E KE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EK+ET+  P NSK
Subjt:  EKVETSSLPSNSK

KAA0061315.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.9e-8880.28Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSFGN+ASELDNSL KEVSELKSQMLNMTTL TSFV G PLKV KCGVCGLVGH NDKCP++IEDVN++R+YDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK T A S+SS QG NLED++K LATNTLSFQQEMKQQMTQLTT  SK++GKGKLSAQP HANVS ISLRSGKIL+TP+S+EKKVTS P+ L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

TYK14267.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.9e-8880.28Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSFGN+ASELDNSL KEVSELKSQMLNMTTL TSFV G PLKV KCGVCGLVGH NDKCP++IEDVN++R+YDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK T A S+SS QG NLED++K LATNTLSFQQEMKQQMTQLTT  SK++GKGKLSAQP HANVS ISLRSGKIL+TP+S+EKKVTS P+ L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

XP_008465471.1 PREDICTED: uncharacterized protein LOC103503078, partial [Cucumis melo]5.9e-8880.28Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSFGN+ASELDNSL KEVSELKSQMLNMTTL TSFV G PLKV KCGVCGLVGH NDKCP++IEDVN++R+YDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK T A S+SS QG NLED++K LATNTLSFQQEMKQQMTQLTT  SK++GKGKLSAQP HANVS ISLRSGKIL+TP+S+EKKVTS P+ L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

TrEMBL top hitse value%identityAlignment
A0A1S3CQF6 uncharacterized protein LOC1035030782.8e-8880.28Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSFGN+ASELDNSL KEVSELKSQMLNMTTL TSFV G PLKV KCGVCGLVGH NDKCP++IEDVN++R+YDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK T A S+SS QG NLED++K LATNTLSFQQEMKQQMTQLTT  SK++GKGKLSAQP HANVS ISLRSGKIL+TP+S+EKKVTS P+ L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

A0A5A7V668 Retrotransposon gag protein2.8e-8880.28Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSFGN+ASELDNSL KEVSELKSQMLNMTTL TSFV G PLKV KCGVCGLVGH NDKCP++IEDVN++R+YDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK T A S+SS QG NLED++K LATNTLSFQQEMKQQMTQLTT  SK++GKGKLSAQP HANVS ISLRSGKIL+TP+S+EKKVTS P+ L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

A0A5D3CQR9 Retrotransposon gag protein2.8e-8880.28Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSFGN+ASELDNSL KEVSELKSQMLNMTTL TSFV G PLKV KCGVCGLVGH NDKCP++IEDVN++R+YDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK T A S+SS QG NLED++K LATNTLSFQQEMKQQMTQLTT  SK++GKGKLSAQP HANVS ISLRSGKIL+TP+S+EKKVTS P+ L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

A0A5D3CRR8 Retrotransposon gag protein2.0e-8980.75Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        M +NSQSF NRASELDNSLTKEVSELKSQMLNMTTL TSFVQG PLKV KCGVCGLVGHPNDKCP++IEDVN++RKYDPHGNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK TQA S+SSNQG NLED++K LATNTLSFQQEMKQQMTQLTTAISK++GKGKLSAQ ++ANVSA+SLRSGKIL+TP+++EKK TS P+ L  ++E KE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EK+ET+  P NSK
Subjt:  EKVETSSLPSNSK

E5GBZ4 Retrotransposon gag protein9.8e-8981.22Show/hide
Query:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN
        MT+NSQ+FGNRA ELDN LTKEVSELKSQMLNMTTL TSFVQG PLKV KCGVC LVGHPNDKCP++IEDVN++RKYDP+GNTYNSGWRDNPNLRWGNDN
Subjt:  MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDN

Query:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE
        QK TQA  +SSNQG NLED++K LATNTLSFQQEMKQQMTQLTTAISK++GKGKL AQPD+ANVSAISLRSGKIL+TP+++EKKVTS  + L +++ESKE
Subjt:  QKPTQATSSSSNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKE

Query:  EKVETSSLPSNSK
        EKVET+  PSNSK
Subjt:  EKVETSSLPSNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGAACTCTCAAAGTTTTGGGAATAGAGCATCGGAACTTGACAACTCTCTAACAAAAGAGGTAAGTGAATTAAAATCTCAAATGTTAAATATGACTACTCTTTT
TACTTCTTTTGTGCAAGGTGACCCTCTCAAAGTAGCCAAGTGTGGAGTTTGTGGCTTAGTTGGTCATCCAAATGACAAGTGCCCCGACTTGATTGAGGATGTTAATGTCA
TTCGTAAGTACGATCCCCACGGTAATACATACAATTCGGGATGGAGAGACAACCCAAATTTGAGATGGGGGAATGACAACCAAAAGCCCACCCAAGCAACATCCTCCTCT
TCAAACCAAGGTATGAATCTTGAAGACATGGTCAAAACTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATGACTCAACTCACTACCGCCATAAG
CAAGTTGGAAGGAAAAGGTAAGCTTTCGGCCCAACCAGACCATGCAAATGTGAGTGCTATCTCACTTAGAAGTGGTAAGATTCTTGAAACCCCTTCTAGTGAAGAAAAAA
AGGTAACTTCCAATCCTATCCTTCTTGAAAATGAAAGTGAGTCTAAGGAAGAAAAAGTAGAAACAAGCTCCTTACCATCTAATTCCAAGAAAGGAACAAGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGAACTCTCAAAGTTTTGGGAATAGAGCATCGGAACTTGACAACTCTCTAACAAAAGAGGTAAGTGAATTAAAATCTCAAATGTTAAATATGACTACTCTTTT
TACTTCTTTTGTGCAAGGTGACCCTCTCAAAGTAGCCAAGTGTGGAGTTTGTGGCTTAGTTGGTCATCCAAATGACAAGTGCCCCGACTTGATTGAGGATGTTAATGTCA
TTCGTAAGTACGATCCCCACGGTAATACATACAATTCGGGATGGAGAGACAACCCAAATTTGAGATGGGGGAATGACAACCAAAAGCCCACCCAAGCAACATCCTCCTCT
TCAAACCAAGGTATGAATCTTGAAGACATGGTCAAAACTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATGACTCAACTCACTACCGCCATAAG
CAAGTTGGAAGGAAAAGGTAAGCTTTCGGCCCAACCAGACCATGCAAATGTGAGTGCTATCTCACTTAGAAGTGGTAAGATTCTTGAAACCCCTTCTAGTGAAGAAAAAA
AGGTAACTTCCAATCCTATCCTTCTTGAAAATGAAAGTGAGTCTAAGGAAGAAAAAGTAGAAACAAGCTCCTTACCATCTAATTCCAAGAAAGGAACAAGGGATTGA
Protein sequenceShow/hide protein sequence
MTKNSQSFGNRASELDNSLTKEVSELKSQMLNMTTLFTSFVQGDPLKVAKCGVCGLVGHPNDKCPDLIEDVNVIRKYDPHGNTYNSGWRDNPNLRWGNDNQKPTQATSSS
SNQGMNLEDMVKTLATNTLSFQQEMKQQMTQLTTAISKLEGKGKLSAQPDHANVSAISLRSGKILETPSSEEKKVTSNPILLENESESKEEKVETSSLPSNSKKGTRD