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PI0012776 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012776
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:13464247..13464747
RNA-Seq ExpressionPI0012776
SyntenyPI0012776
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1760.76Show/hide
Query:  GFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        G++GF  + GND EIP MYSQ LDMS DDIMGTRP ++S+GR  SS SK+KW GQTVETV+I  N++++ NDQL  I +
Subjt:  GFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-2372.5Show/hide
Query:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        EG++GF AD GND EIPMMYSQ +DM  DDIMGTRP RS+EGRTGSSGSK+K GGQ VET+EI RN M+ +ND+LKAI E
Subjt:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

KAA0061292.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]1.4e-1768.75Show/hide
Query:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        EG+ GF  + GND EI MMYS  L+MSPDD MGT  GRSSEGR GS GSK+K G QTVETV+I  NAM++ANDQLK IAE
Subjt:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

TYK08370.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-1759.26Show/hide
Query:  GEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        G G++GF  D GN+ EIP MYSQ LDMS DDIMGT+P R+S+GR  S+GSK+K G Q VET +I R+AM++AN+ L  IA+
Subjt:  GEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

TYK11924.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-1858.89Show/hide
Query:  LLVSVVRKLGEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        + V V   +  G++GF  DY ND EIP MYS+ LDMS   I GTR G ++E R G S SKKK GGQ++ETVEI RN M++ANDQLKAIAE
Subjt:  LLVSVVRKLGEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

TrEMBL top hitse value%identityAlignment
A0A5A7UNI7 Retrotransposon protein1.5e-1760.76Show/hide
Query:  GFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        G++GF  + GND EIP MYSQ LDMS DDIMGTRP ++S+GR  SS SK+KW GQTVETV+I  N++++ NDQL  I +
Subjt:  GFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

A0A5A7UZF5 RING-H2 finger protein ATL666.7e-1868.75Show/hide
Query:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        EG+ GF  + GND EI MMYS  L+MSPDD MGT  GRSSEGR GS GSK+K G QTVETV+I  NAM++ANDQLK IAE
Subjt:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

A0A5A7V469 Retrotransposon protein4.1e-2372.5Show/hide
Query:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        EG++GF AD GND EIPMMYSQ +DM  DDIMGTRP RS+EGRTGSSGSK+K GGQ VET+EI RN M+ +ND+LKAI E
Subjt:  EGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

A0A5D3CAJ4 Retrotransposon protein4.3e-1759.26Show/hide
Query:  GEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        G G++GF  D GN+ EIP MYSQ LDMS DDIMGT+P R+S+GR  S+GSK+K G Q VET +I R+AM++AN+ L  IA+
Subjt:  GEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

A0A5D3CL79 Retrotransposon protein3.9e-1858.89Show/hide
Query:  LLVSVVRKLGEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE
        + V V   +  G++GF  DY ND EIP MYS+ LDMS   I GTR G ++E R G S SKKK GGQ++ETVEI RN M++ANDQLKAIAE
Subjt:  LLVSVVRKLGEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTATCAAGCATTTATTAGTATCAGTTGTTCGAAAATTGGGTGAAGGGTTCAAGGGATTTTTCGCTGATTATGGGAACGATACGGAGATCCCTATGATGTACAGTCA
GAGACTAGACATGTCGCCTGATGACATCATGGGCACACGACCCGGTCGCTCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAAGAAATGGGGAGGCCAGACGGTAG
AGACTGTGGAAATCAATCGGAATGCAATGGACTTCGCCAATGATCAGCTGAAGGCCATTGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTATCAAGCATTTATTAGTATCAGTTGTTCGAAAATTGGGTGAAGGGTTCAAGGGATTTTTCGCTGATTATGGGAACGATACGGAGATCCCTATGATGTACAGTCA
GAGACTAGACATGTCGCCTGATGACATCATGGGCACACGACCCGGTCGCTCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAAGAAATGGGGAGGCCAGACGGTAG
AGACTGTGGAAATCAATCGGAATGCAATGGACTTCGCCAATGATCAGCTGAAGGCCATTGCAGAGTGA
Protein sequenceShow/hide protein sequence
MRIKHLLVSVVRKLGEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE