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PI0012788 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012788
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr06:15850666..15854247
RNA-Seq ExpressionPI0012788
SyntenyPI0012788
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047748.1 uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa]3.9e-3568.85Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS
        GQWN CNVYENYSV GI VD+R+NFNSLV L  E+++LD SVELSVLL+F KSN+QIVV IKK NDVAWYLAFVKDATSRHPLVAHVS+  L G SS++S
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS

Query:  SVRDNDDMWLNVGSSSSVSNNE
        SV+ N DM LN+       N++
Subjt:  SVRDNDDMWLNVGSSSSVSNNE

KAA0048538.1 uncharacterized protein E6C27_scaffold61G001670 [Cucumis melo var. makuwa]6.8e-3264.52Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS
        GQWN  NV+ENYSV  ILVD+R++FNSL+ LT E+++LD  VELSVLL+F KSN+Q VV IKK NDV+WYLAF KDATSRHPLVAHVS++ LE  SS++S
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS

Query:  SVRDNDDMWLNVGSSSSVSNNEVI
        SVRDN DM LN+     +S +  I
Subjt:  SVRDNDDMWLNVGSSSSVSNNEVI

KAA0051464.1 MuDR family transposase [Cucumis melo var. makuwa]8.9e-3271.56Show/hide
Query:  NGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTASSVR
        NGCNVYENYSV GILVD+R++FNSL  L  E+++LD SVELSVLL+F KSN+Q VV IKK NDVAWYLAFVKDATSRHPLVAHV +  L G SS++SSV+
Subjt:  NGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTASSVR

Query:  DNDDMWLNV
         N DM LN+
Subjt:  DNDDMWLNV

KAA0056398.1 putative integrase, identical [Cucumis melo var. makuwa]4.9e-3075.79Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF
        GQWNGCNVYENYSV GILVD+R++FNSLV L  E+++LD SVELSVLL+F KSN+Q VV IKK NDVAWYLAFVKDATSRHPLVAH S+    GF
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF

TYK29120.1 hypothetical protein E5676_scaffold120G002610 [Cucumis melo var. makuwa]4.9e-3075.79Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF
        GQWNGCNVYENYSV GILVD+R++FNSLV L  E+++LD SVELSVLL+F KSN+Q VV IKK NDVAWYLAFVKDATSRHPLVAH S+    GF
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF

TrEMBL top hitse value%identityAlignment
A0A5A7U017 Uncharacterized protein3.3e-3264.52Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS
        GQWN  NV+ENYSV  ILVD+R++FNSL+ LT E+++LD  VELSVLL+F KSN+Q VV IKK NDV+WYLAF KDATSRHPLVAHVS++ LE  SS++S
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS

Query:  SVRDNDDMWLNVGSSSSVSNNEVI
        SVRDN DM LN+     +S +  I
Subjt:  SVRDNDDMWLNVGSSSSVSNNEVI

A0A5A7U815 MuDR family transposase4.3e-3271.56Show/hide
Query:  NGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTASSVR
        NGCNVYENYSV GILVD+R++FNSL  L  E+++LD SVELSVLL+F KSN+Q VV IKK NDVAWYLAFVKDATSRHPLVAHV +  L G SS++SSV+
Subjt:  NGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTASSVR

Query:  DNDDMWLNV
         N DM LN+
Subjt:  DNDDMWLNV

A0A5A7UMS5 Putative integrase, identical2.4e-3075.79Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF
        GQWNGCNVYENYSV GILVD+R++FNSLV L  E+++LD SVELSVLL+F KSN+Q VV IKK NDVAWYLAFVKDATSRHPLVAH S+    GF
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF

A0A5D3BUA2 MULE domain-containing protein1.9e-3568.85Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS
        GQWN CNVYENYSV GI VD+R+NFNSLV L  E+++LD SVELSVLL+F KSN+QIVV IKK NDVAWYLAFVKDATSRHPLVAHVS+  L G SS++S
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTAS

Query:  SVRDNDDMWLNVGSSSSVSNNE
        SV+ N DM LN+       N++
Subjt:  SVRDNDDMWLNVGSSSSVSNNE

A0A5D3E0T4 CCHC-type domain-containing protein2.4e-3075.79Show/hide
Query:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF
        GQWNGCNVYENYSV GILVD+R++FNSLV L  E+++LD SVELSVLL+F KSN+Q VV IKK NDVAWYLAFVKDATSRHPLVAH S+    GF
Subjt:  GQWNGCNVYENYSVVGILVDVRINFNSLVGLTYEEIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATATTTTCAATTACTTATTATTCATTAAAGTTAATTCCAAAATTAGGAAATCTTTAGAAGATTTAAGTATTACTGTAAGAATTATCTTTTCACGATCATTTAC
ATTGAACTACACGATCGTTTACTATATTCATTGTAACGACCGCGGCTTCTTCAAGTTCACCTTCTCTTTCTTGCTTTCAGCCGCCGAGCACCCTTTCTTCTCAGTTCCTT
GCGTCGCGTTTCGCTTCGTCGTTCAAAGCTCTCCGGTCATCGTTCTGCCAGAAGGTTCGTGTTTTTTGTTGTTGGGCATTCAGAGTTGTCTCCGCGAAGTGAAGTGGTAT
GGAGGCATTTTGTGGTTGCTCTTCTCCGTCACCGGTTTCTTCTCTGTTGTTCGCGTTTTGGTTGTGTTGTTCGCGAAGCTCAGGAGTTGTTCGCGAGGTTCCCTTGTCGT
CGCTCGAGTTCGCGTTCAGCTCGCGTCTCGCCTAGTCACTCTTTCTCGCGAACTGGTTGTCTCGCCGCGACCTGAGGCCTTCTCGCCTCCTCCTTCTTCGCAAGTCCCTT
GTTCGCGAGGTCAATGGAATGGATGCAATGTCTATGAGAATTATTCGGTTGTTGGAATTTTGGTAGATGTCCGAATCAACTTTAATTCTTTGGTTGGCTTAACATACGAA
GAGATTCAATTGGATGGATCTGTAGAATTATCTGTTCTACTTGAATTTGATAAAAGCAACATTCAAATTGTGGTTCTAATAAAGAAACTCAATGATGTTGCTTGGTATTT
AGCTTTTGTTAAAGATGCAACTAGTAGACATCCATTAGTTGCTCATGTAAGTATTAGTTCTTTGGAAGGATTTTCTTCTACTGCTAGTAGTGTACGGGACAATGATGATA
TGTGGTTAAATGTAGGTTCTTCTTCTTCTGTTTCAAATAATGAAGTTATAAGAGAGGCAGGCTTCTTCAACAGTAATTGGCAGTTGCTTGATAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATATTTTCAATTACTTATTATTCATTAAAGTTAATTCCAAAATTAGGAAATCTTTAGAAGATTTAAGTATTACTGTAAGAATTATCTTTTCACGATCATTTAC
ATTGAACTACACGATCGTTTACTATATTCATTGTAACGACCGCGGCTTCTTCAAGTTCACCTTCTCTTTCTTGCTTTCAGCCGCCGAGCACCCTTTCTTCTCAGTTCCTT
GCGTCGCGTTTCGCTTCGTCGTTCAAAGCTCTCCGGTCATCGTTCTGCCAGAAGGTTCGTGTTTTTTGTTGTTGGGCATTCAGAGTTGTCTCCGCGAAGTGAAGTGGTAT
GGAGGCATTTTGTGGTTGCTCTTCTCCGTCACCGGTTTCTTCTCTGTTGTTCGCGTTTTGGTTGTGTTGTTCGCGAAGCTCAGGAGTTGTTCGCGAGGTTCCCTTGTCGT
CGCTCGAGTTCGCGTTCAGCTCGCGTCTCGCCTAGTCACTCTTTCTCGCGAACTGGTTGTCTCGCCGCGACCTGAGGCCTTCTCGCCTCCTCCTTCTTCGCAAGTCCCTT
GTTCGCGAGGTCAATGGAATGGATGCAATGTCTATGAGAATTATTCGGTTGTTGGAATTTTGGTAGATGTCCGAATCAACTTTAATTCTTTGGTTGGCTTAACATACGAA
GAGATTCAATTGGATGGATCTGTAGAATTATCTGTTCTACTTGAATTTGATAAAAGCAACATTCAAATTGTGGTTCTAATAAAGAAACTCAATGATGTTGCTTGGTATTT
AGCTTTTGTTAAAGATGCAACTAGTAGACATCCATTAGTTGCTCATGTAAGTATTAGTTCTTTGGAAGGATTTTCTTCTACTGCTAGTAGTGTACGGGACAATGATGATA
TGTGGTTAAATGTAGGTTCTTCTTCTTCTGTTTCAAATAATGAAGTTATAAGAGAGGCAGGCTTCTTCAACAGTAATTGGCAGTTGCTTGATAGATGA
Protein sequenceShow/hide protein sequence
MENIFNYLLFIKVNSKIRKSLEDLSITVRIIFSRSFTLNYTIVYYIHCNDRGFFKFTFSFLLSAAEHPFFSVPCVAFRFVVQSSPVIVLPEGSCFLLLGIQSCLREVKWY
GGILWLLFSVTGFFSVVRVLVVLFAKLRSCSRGSLVVARVRVQLASRLVTLSRELVVSPRPEAFSPPPSSQVPCSRGQWNGCNVYENYSVVGILVDVRINFNSLVGLTYE
EIQLDGSVELSVLLEFDKSNIQIVVLIKKLNDVAWYLAFVKDATSRHPLVAHVSISSLEGFSSTASSVRDNDDMWLNVGSSSSVSNNEVIREAGFFNSNWQLLDR