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PI0012861 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012861
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRAB6-interacting golgin
Genome locationchr08:17433140..17435040
RNA-Seq ExpressionPI0012861
SyntenyPI0012861
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025281.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa]7.1e-7092.73Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLG      EKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

XP_004143305.1 uncharacterized protein LOC101209289 [Cucumis sativus]1.6e-7495.76Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQSDQN PQQLQAMLENS NLSFSSKEDDEMSKSALAAFREKEEEIDRMRTEL++KLQ+RLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLGVTCQKKEKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

XP_008462544.1 PREDICTED: uncharacterized protein LOC103500877 [Cucumis melo]1.5e-7596.36Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLGVTCQKKEKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

XP_023543803.1 uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo]6.9e-6584.85Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ++QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RLGRV+EESRRL+S+REELE I GDP RKEIGQIRK+IDTL
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLG  CQKKEKEYKDALDAFNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVDN +
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

XP_038882826.1 uncharacterized protein LOC120073968 isoform X1 [Benincasa hispida]6.4e-7191.52Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQSDQN PQQLQAML+NS +LSFSSKEDD+MSKSALAAFREKEEEIDRMR +LH+KLQVRLGRVQEESRRL+S+REEL+AI GDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLG+TCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

TrEMBL top hitse value%identityAlignment
A0A0A0KHE9 RAB6-interacting golgin7.9e-7595.76Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQSDQN PQQLQAMLENS NLSFSSKEDDEMSKSALAAFREKEEEIDRMRTEL++KLQ+RLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLGVTCQKKEKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

A0A1S3CIS0 RAB6-interacting golgin7.2e-7696.36Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLGVTCQKKEKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

A0A5A7SM04 RAB6-interacting golgin3.4e-7092.73Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID L
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLG      EKEYKDALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

A0A6J1EJF7 RAB6-interacting golgin2.2e-6484.24Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ++QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RLGRV+EESRRL+S+REELE I GDP RKEIGQIRK+IDTL
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        NKELKPLG  CQKKEKEYKDALDAFNEKNNEKV  ISKLMEMVGESE++RLKRLEELSKHVDN +
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

A0A6J1IS07 RAB6-interacting golgin4.4e-6585.89Show/hide
Query:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        MQ++QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ RLGRV+EESRRL+S+REELE I GDP RKEIGQIRK+IDTL
Subjt:  MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN
        NKELKPLG  CQKKEKEYKDALDAFNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVDN
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)1.1e-4461.82Show/hide
Query:  QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        Q QP QQ   M+ ++G+LSFS   S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +LGRV++E++RLS++REELE++  DPMRKE+  +RKKID++
Subjt:  QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEM---VGESEKLRLKRLEELSKHVD
        NKELKPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLMEM   VGESEKLR+ +LEELSK ++
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEM---VGESEKLRLKRLEELSKHVD

AT2G36410.2 Family of unknown function (DUF662)5.8e-4662.35Show/hide
Query:  QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        Q QP QQ   M+ ++G+LSFS   S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +LGRV++E++RLS++REELE++  DPMRKE+  +RKKID++
Subjt:  QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD
        NKELKPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLME+VGESEKLR+ +LEELSK ++
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD

AT2G36410.3 Family of unknown function (DUF662)8.4e-4561.73Show/hide
Query:  QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL
        Q QP QQ   M+ ++G+LSFS   S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +LGRV++E++RLS++REELE++  DPMRKE+  +RKKID++
Subjt:  QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTL

Query:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD
        NKELKPLG T QKK  EYK+ALD FNEKN EKVQLI+KLME+VGESEKLR+ +LEELSK ++
Subjt:  NKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD

AT3G09980.1 Family of unknown function (DUF662)1.5e-4663.29Show/hide
Query:  QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELK
        +QL A L  SG++SFS   SKED+EMS++AL+AFR KEEEI++ + E+  ++Q +LGRV+EE++RL+ +REELE +  DPMRKE+  +RKKID++NKELK
Subjt:  QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELK

Query:  PLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN
        PLG T QKKE+EYK+AL+AFNEKN EKVQLI++LME+VGESEK+R+K+LEELSK++D+
Subjt:  PLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN

AT3G52920.2 Family of unknown function (DUF662)2.2e-4562.11Show/hide
Query:  PQQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKEL
        PQQ+        +LSFS   SKED+EM++SAL+AFR KE+EI++ + E+  +++ +LGRV+EE+RRL+S+REELE +  DPMRKE+  +RKKID++NKEL
Subjt:  PQQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKEL

Query:  KPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
        KPLG T QKKE+EYK+ALD FNEKN EKVQLI+KLME+VGESEKLRLK+L+ELS+ +D  S
Subjt:  KPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCGACCAGAATCAACCGCAGCAACTTCAAGCAATGTTAGAGAATTCTGGAAATTTGAGTTTCAGTAGTAAAGAAGACGATGAGATGTCCAAATCGGCGCTTGC
GGCTTTTAGGGAAAAGGAAGAGGAGATCGACCGGATGAGGACTGAGCTTCACAGCAAACTTCAAGTTCGTCTCGGCCGTGTTCAGGAAGAATCCAGGCGTTTGTCTTCAC
TTCGAGAGGAACTTGAAGCCATAGGAGGAGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATTGATACCCTAAACAAGGAATTGAAGCCTCTTGGAGTAACG
TGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTTGATGCTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTGATGGAGATGGTTGGTGAAAGTGA
AAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATAACACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TGAGGAAGAAAGAAAAATTGAGTCAAATTGAAGTTTTAAATTTATATAATTGTGTAAAAGGTAATATTTATATAAATATAAAGGTTGAGATTATAAGCTATGGGTCCAAT
TTTTACAAGTTTGAGGTTTAGTTAGAAATGGAGAAGTTAATTTTTTGCTATTAAAAATAAAAAGAGATGGTTTTCCCCAATTTGGGGTATAAAATATATAAAAAGTAAAC
AAATTAAAATGAGAGGGTTTGAAAATAAAAATAAATAAATAAATAATGGGGGAAAATGATATTTTAACCCAATAGAAAAAGAAAGCAACAGAGCAATAGCCTAAGAAAGA
AAAAGCAGAGGAGAGGAAAGGAAAGGAAATAGCGATTCATTCATTCACAGAAACAGAAACAAAAGGGGGCGTTGGTTTCAAGAAAAATCAAGATCAAGGACGAGAGAAAA
GATGCAGAGCGACCAGAATCAACCGCAGCAACTTCAAGCAATGTTAGAGAATTCTGGAAATTTGAGTTTCAGTAGTAAAGAAGACGATGAGATGTCCAAATCGGCGCTTG
CGGCTTTTAGGGAAAAGGAAGAGGAGATCGACCGGATGAGGACTGAGCTTCACAGCAAACTTCAAGTTCGTCTCGGCCGTGTTCAGGAAGAATCCAGGCGTTTGTCTTCA
CTTCGAGAGGAACTTGAAGCCATAGGAGGAGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATTGATACCCTAAACAAGGAATTGAAGCCTCTTGGAGTAAC
GTGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTTGATGCTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTGATGGAGATGGTTGGTGAAAGTG
AAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATAACACTTCTTAATTTAATTACTGAATTCAATCAATCAATCAATCAGTTTCTATTAGTTTCCTT
TGGTTTTATGTTTTATGTTTTTTTTTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVT
CQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS