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PI0012862 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012862
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr01:21404184..21404741
RNA-Seq ExpressionPI0012862
SyntenyPI0012862
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042084.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.2e-0746.34Show/hide
Query:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKE
        +EDNHR LS ++TLK ELK  R +FE LSK  +ML  GTQ L +IL  GK   +K G+GFS    +G       T+F +A +
Subjt:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKE

KAA0051793.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.4e-0934.57Show/hide
Query:  MTITLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDG------------AESEV---------TLLEDNHRLLSMISTLKLELKVV
        + +TLS++E + D+D E     L  CV E ES V +   V       T                + EV          LLEDNH L+SMI  LK++LK V
Subjt:  MTITLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDG------------AESEV---------TLLEDNHRLLSMISTLKLELKVV

Query:  RVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA
        + +F++LSKS R+L   TQ L+++L  GKI+ +KK +G+  K+   + +E    +FVRA  +
Subjt:  RVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA

KAA0056406.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.2e-0744.05Show/hide
Query:  LLEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA
        L+E+N   LS I TLK ELK  R  FE LSKS +M+  GT  L+ +L  GK   DK+G+GFS++      N   +T+FVR  ++
Subjt:  LLEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA

TYK01584.1 putative envelope-like protein [Cucumis melo var. makuwa]1.1e-0834.42Show/hide
Query:  TLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDGAESEV-------------------TLLEDNHRLLSMISTLKLELKVVRVDFE
        TLS+DE + D+DCE   RAL   +   E+ + E + + + N   T      EV                    L ++N RL+  IS LK ELK  + +++
Subjt:  TLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDGAESEV-------------------TLLEDNHRLLSMISTLKLELKVVRVDFE

Query:  ALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRA
         L+KS RML+ GT  L+ IL   K++ DKKGIG+S    +G  ++   T+FV A
Subjt:  ALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRA

TYK01606.1 uncharacterized protein E5676_scaffold451G002030 [Cucumis melo var. makuwa]7.4e-0852.38Show/hide
Query:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDK
        +EDNHRL++MIS LK+EL+ V  +F++LSKS ++L FGTQ L+++L  GK + DK  +GF +K
Subjt:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDK

TrEMBL top hitse value%identityAlignment
A0A5D3BQY7 Putative envelope-like protein5.5e-0934.42Show/hide
Query:  TLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDGAESEV-------------------TLLEDNHRLLSMISTLKLELKVVRVDFE
        TLS+DE + D+DCE   RAL   +   E+ + E + + + N   T      EV                    L ++N RL+  IS LK ELK  + +++
Subjt:  TLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDGAESEV-------------------TLLEDNHRLLSMISTLKLELKVVRVDFE

Query:  ALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRA
         L+KS RML+ GT  L+ IL   K++ DKKGIG+S    +G  ++   T+FV A
Subjt:  ALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRA

A0A5D3BTR4 Uncharacterized protein3.6e-0852.38Show/hide
Query:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDK
        +EDNHRL++MIS LK+EL+ V  +F++LSKS ++L FGTQ L+++L  GK + DK  +GF +K
Subjt:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDK

A0A5D3D296 Gag-pol polyprotein1.0e-0746.34Show/hide
Query:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKE
        +EDNHR LS ++TLK ELK  R +FE LSK  +ML  GTQ L +IL  GK   +K G+GFS    +G       T+F +A +
Subjt:  LEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKE

A0A5D3DD57 Gag-pol polyprotein6.5e-1034.57Show/hide
Query:  MTITLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDG------------AESEV---------TLLEDNHRLLSMISTLKLELKVV
        + +TLS++E + D+D E     L  CV E ES V +   V       T                + EV          LLEDNH L+SMI  LK++LK V
Subjt:  MTITLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDG------------AESEV---------TLLEDNHRLLSMISTLKLELKVV

Query:  RVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA
        + +F++LSKS R+L   TQ L+++L  GKI+ +KK +G+  K+   + +E    +FVRA  +
Subjt:  RVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA

A0A5D3DZR7 Gag-pol polyprotein1.0e-0744.05Show/hide
Query:  LLEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA
        L+E+N   LS I TLK ELK  R  FE LSKS +M+  GT  L+ +L  GK   DK+G+GFS++      N   +T+FVR  ++
Subjt:  LLEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIRMDKKGIGFSDKSQQGATNECPRTIFVRAKEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATTACTCTATCAAATGATGAGTTAACAGTTGACAACGATTGTGAAGAAGACGATAGAGCCTTGTTTGGTTGTGTTGCAGAGGTTGAATCTACAGTAATAGAAGG
CAGTGTGGTTCAAAAGAATAATATTGACAGTACTGGTGATGGTGCTGAGTCTGAGGTTACCTTATTGGAAGATAATCATCGTTTGTTATCCATGATATCCACCCTCAAAC
TTGAGTTGAAAGTTGTTCGTGTGGACTTTGAAGCTCTATCCAAGTCGTTCAGGATGCTCAATTTTGGCACACAAGTCCTAAACAGTATTCTGAAAGCAGGCAAGATTAGA
ATGGACAAAAAGGGTATAGGATTCTCTGATAAAAGTCAACAGGGAGCAACCAATGAATGTCCGAGAACTATATTTGTTCGTGCTAAGGAAGCTTGTGTCGAGGAAACTGA
AAAAGGTATATCTCAAGAAGGCAATTTAGTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAATTACTCTATCAAATGATGAGTTAACAGTTGACAACGATTGTGAAGAAGACGATAGAGCCTTGTTTGGTTGTGTTGCAGAGGTTGAATCTACAGTAATAGAAGG
CAGTGTGGTTCAAAAGAATAATATTGACAGTACTGGTGATGGTGCTGAGTCTGAGGTTACCTTATTGGAAGATAATCATCGTTTGTTATCCATGATATCCACCCTCAAAC
TTGAGTTGAAAGTTGTTCGTGTGGACTTTGAAGCTCTATCCAAGTCGTTCAGGATGCTCAATTTTGGCACACAAGTCCTAAACAGTATTCTGAAAGCAGGCAAGATTAGA
ATGGACAAAAAGGGTATAGGATTCTCTGATAAAAGTCAACAGGGAGCAACCAATGAATGTCCGAGAACTATATTTGTTCGTGCTAAGGAAGCTTGTGTCGAGGAAACTGA
AAAAGGTATATCTCAAGAAGGCAATTTAGTTAACTGA
Protein sequenceShow/hide protein sequence
MTITLSNDELTVDNDCEEDDRALFGCVAEVESTVIEGSVVQKNNIDSTGDGAESEVTLLEDNHRLLSMISTLKLELKVVRVDFEALSKSFRMLNFGTQVLNSILKAGKIR
MDKKGIGFSDKSQQGATNECPRTIFVRAKEACVEETEKGISQEGNLVN