; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012878 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012878
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:18309341..18310173
RNA-Seq ExpressionPI0012878
SyntenyPI0012878
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.5e-9972.93Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYM    HGHGRGRG+HN
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN

Query:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        EYLYYE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.0e-9973.31Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYM    HGHGRGRGEHN
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN

Query:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        EYLYYE PAAVPEQ +E                QQQENQE ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.5e-9972.93Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYM    HGHGRGRG+HN
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN

Query:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        EYLYYE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-9470.15Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR++ADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYM    HGHGRGRGE
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE

Query:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        HNEYLYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]2.8e-9470.15Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR++ADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYM    HGHGRGRGE
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE

Query:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        HNEYLYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-9470.15Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR++ADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYM    HGHGRGRGE
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE

Query:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        HNEYLYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein4.1e-9972.93Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYM    HGHGRGRG+HN
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN

Query:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        EYLYYE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.4e-9973.31Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYINWY+NI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYM    HGHGRGRGEHN
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN

Query:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        EYLYYE PAAVPEQ +E                QQQENQE ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.1e-9972.93Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYM    HGHGRGRG+HN
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHN

Query:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        EYLYYE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  EYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-9470.15Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV
        MRW NRRRF ATG    QFD+DVT EYI+WY+NI++LYIT+PGAA+ HLRSNN RLR++ADDPQQVL+ICN NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYM    HGHGRGRGE
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGE

Query:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        HNEYLYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  HNEYLYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGACAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCT
CTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATCGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACG
AGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGT
CGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTCGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCATGGGCATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAG
GAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGGTCGACGACGGCAACCAGCAAGAAATCGACGACGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGACAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAGAAATATTACCAGGCT
CTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATCGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAGTAACG
AGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGT
CGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTCGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCATGGGCATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAG
GAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGGTCGACGACGGCAACCAGCAAGAAATCGACGACGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MRWLNRRRFIATGCSFGQFDVDVTPEYINWYRNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLDICNSNERYMENIHYMYDVPIVPAPVQRRRAQVQEPDELEEVE
QQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGHGHGRGRGEHNEYLYYEPPAAVPEQPDEQQQ
ENQEGLEQQRVHGRRRQPARNRRRPGCGTH