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PI0012896 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012896
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionThionin-like protein 2
Genome locationchr01:23405573..23408491
RNA-Seq ExpressionPI0012896
SyntenyPI0012896
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 23.9e-0436.73Show/hide
Query:  MDTNRLVEARKFCKAGCVLHFCSHLSK-ENPNMEKMNSCLNQCDQVCIK
        + +N + E+  FCK GC  + C  LS  +NPN+E++++C++ C   C K
Subjt:  MDTNRLVEARKFCKAGCVLHFCSHLSK-ENPNMEKMNSCLNQCDQVCIK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.2.8e-0536.73Show/hide
Query:  MDTNRLVEARKFCKAGCVLHFCSHLSK-ENPNMEKMNSCLNQCDQVCIK
        + +N + E+  FCK GC  + C  LS  +NPN+E++++C++ C   C K
Subjt:  MDTNRLVEARKFCKAGCVLHFCSHLSK-ENPNMEKMNSCLNQCDQVCIK

AT1G12672.1 unknown protein5.2e-0437.78Show/hide
Query:  TNRLVEARKFCKAGCVLHFCSHLSK-ENPNMEKMNSCLNQCDQVC
        TN +     +CK GC  H C+ LS  +NPN++K+  C++ C   C
Subjt:  TNRLVEARKFCKAGCVLHFCSHLSK-ENPNMEKMNSCLNQCDQVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACCAACCGTTTGGTTGAGGCTCGTAAATTTTGCAAAGCTGGTTGTGTCTTGCATTTCTGTAGCCATTTGAGCAAAGAAAACCCAAATATGGAGAAAATGAACAG
TTGTTTGAACCAGTGTGATCAAGTGTGCATAAAAATGCTTAGAATCCTTAACTTTACGAGTAGTGGCACGATGATCAACTCTTTCACCATCAGAACTACTACTGCTATCA
CTTGTACTCTCATACCTGTGTCAGTTGAACTCCCAAAGCCCCCGAAGGAACTAGAATCAGAAAGTGATGAGTCTGAATCTGAAGAATACGAATCAGATTCAGTATCAGAG
CTGTTTCCCATCACGTTCCAATCTGCTCAATTTTCTTCACAACATCCATTCCCATCACAACTTTTCCAAAGACAACGTGTTTCCCATTCAAAATTGCAGAAGGTGAGAAG
GGGCCAGAAGGATGATCAGAAAATATCAATCTTCAAAACTAAGGAGAATATAAGAAAATACCCATTACCCGTCAAGGTGAGGTTGGGGCTTAAACGTTATAAAGAATTGA
GATCCATTAGTGTTTGGACCGCTGTTTGCCATGGAAAGAATACCAGGTCCATCGTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACCAACCGTTTGGTTGAGGCTCGTAAATTTTGCAAAGCTGGTTGTGTCTTGCATTTCTGTAGCCATTTGAGCAAAGAAAACCCAAATATGGAGAAAATGAACAG
TTGTTTGAACCAGTGTGATCAAGTGTGCATAAAAATGCTTAGAATCCTTAACTTTACGAGTAGTGGCACGATGATCAACTCTTTCACCATCAGAACTACTACTGCTATCA
CTTGTACTCTCATACCTGTGTCAGTTGAACTCCCAAAGCCCCCGAAGGAACTAGAATCAGAAAGTGATGAGTCTGAATCTGAAGAATACGAATCAGATTCAGTATCAGAG
CTGTTTCCCATCACGTTCCAATCTGCTCAATTTTCTTCACAACATCCATTCCCATCACAACTTTTCCAAAGACAACGTGTTTCCCATTCAAAATTGCAGAAGGTGAGAAG
GGGCCAGAAGGATGATCAGAAAATATCAATCTTCAAAACTAAGGAGAATATAAGAAAATACCCATTACCCGTCAAGGTGAGGTTGGGGCTTAAACGTTATAAAGAATTGA
GATCCATTAGTGTTTGGACCGCTGTTTGCCATGGAAAGAATACCAGGTCCATCGTGTTTTAG
Protein sequenceShow/hide protein sequence
MDTNRLVEARKFCKAGCVLHFCSHLSKENPNMEKMNSCLNQCDQVCIKMLRILNFTSSGTMINSFTIRTTTAITCTLIPVSVELPKPPKELESESDESESEEYESDSVSE
LFPITFQSAQFSSQHPFPSQLFQRQRVSHSKLQKVRRGQKDDQKISIFKTKENIRKYPLPVKVRLGLKRYKELRSISVWTAVCHGKNTRSIVF