| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 2.9e-263 | 93.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK S +FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKT +KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLA+SL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 2.3e-268 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSS NFSP YPSSNRHSQQCIKAVKEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTDTP+ KTL+KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSEDQLA+SLKISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 8.7e-276 | 97.64 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSS NFSPSYP SNRHSQQCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KTL+KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLA+SLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 1.7e-263 | 93.71 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK S +FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKT +KVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLA+SL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 1.6e-274 | 97.84 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY ND+RLGQTQVSPTKSVVIAKSS NFSPSYPSSNRHS QCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKT +KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLA+SLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLLKH
RKMEAMLLKH
Subjt: RKMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 1.1e-268 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSS NFSP YPSSNRHSQQCIKAVKEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTDTP+ KTL+KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEERKTRLK+RLGCEPSEDQLA+SLKISRAELRSR+ME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 4.2e-276 | 97.64 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSS NFSPSYP SNRHSQQCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KTL+KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLA+SLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 4.2e-276 | 97.64 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSS NFSPSYP SNRHSQQCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KTL+KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLA+SLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 7.0e-263 | 93.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVSPTKSVVIAKSS NFSPS+PSSNRH+ QCIKAVKEHVDTPSSPT EPWL N+T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+T +KVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLA+SLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 2.0e-262 | 93.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TK VVIAK S +FSPSY SNRH QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKT +KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLA+SL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 1.9e-39 | 36.54 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ N P E IAD P T IL + +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKMEAMLL
+ ++ L+
Subjt: AAKTRKMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 8.9e-191 | 69.63 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTL--QKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ +K+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTL--QKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLAVSLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 5.0e-40 | 34.24 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 8.5e-40 | 34.44 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.5e-129 | 50.84 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNR-------------HSQ-QCIKAVKEHVD-----
M AT A+IGL A RLL++S F L + LG + +F+P P++ + H + Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNR-------------HSQ-QCIKAVKEHVD-----
Query: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQ--------TVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMA
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ D K V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQ--------TVSTDTPRGKTLQKVPVTCSGVSARQRRMSSKRKIQSKHVFMA
Query: QPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMS
+ +SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MS
Subjt: QPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRI
N+RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+++ I
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRI
Query: AESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISK
A SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS+
Subjt: AESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISK
Query: RIGLSRERVRQVGLVALEKLKKAAKTRKMEAML
+ GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: RIGLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.3e-40 | 36.54 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ N P E IAD P T IL + +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKMEAMLL
+ ++ L+
Subjt: AAKTRKMEAMLL
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| AT1G64860.1 sigma factor A | 6.4e-192 | 69.63 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTL--QKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ +K+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTL--QKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLAVSLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLLKH
LK AA+ RKMEAM+LK+
Subjt: LKKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 2.6e-177 | 68.53 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
MATAA+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSTNFSPSYPSSNRHSQQCIKAVKEHVDTPSSPTAEPWLHNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTL--QKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T+ +K+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKTL--QKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLAVSLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.2e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 3.2e-34 | 33.14 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE T ++E + ++V L R + +
Subjt: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAVSLKISRAELRSR
Query: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: VMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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