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PI0012912 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012912
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationchr08:12560395..12565118
RNA-Seq ExpressionPI0012912
SyntenyPI0012912
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603408.1 RNA polymerase II transcriptional coactivator KIWI, partial [Cucurbita argyrosperma subsp. sororia]8.5e-4591.09Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+ GKRKDDEDHVSEGDAPP KTF+KD D+TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_004146395.1 RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis sativus]9.1e-4795.19Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+SGKRK DED VSEGDAPPSKTFKKD DDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSED
        SS D
Subjt:  SSED

XP_008442140.1 PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo]5.3e-4794.23Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+SGKRKDDED VSEGDAPPSKTF+KDPDD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSED
        SS D
Subjt:  SSED

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]1.1e-4491.09Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+ GKRKDDEDH SEGDAPP KTFKKD D+TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_038881105.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Benincasa hispida]3.5e-4692.31Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+ GKRKD+EDH SEGDAPPSKTFKKD DDTDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSED
        SS D
Subjt:  SSED

TrEMBL top hitse value%identityAlignment
A0A0A0L2F1 PC4 domain-containing protein4.4e-4795.19Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+SGKRK DED VSEGDAPPSKTFKKD DDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSED
        SS D
Subjt:  SSED

A0A1S3B4K6 RNA polymerase II transcriptional coactivator KIWI isoform X12.6e-4794.23Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+SGKRKDDED VSEGDAPPSKTF+KDPDD DEIVVCELSKNRRVMVR WQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSED
        SS D
Subjt:  SSED

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like7.8e-4489.11Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+ GKRKDDEDH SEGDAPP KT KKD ++TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.0e-4488.46Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+ GKRKDDEDHV EGDAPP KTF+KD D+TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  SSED
        S  D
Subjt:  SSED

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X14.6e-4489.11Show/hide
Query:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN
        MS+ GKRKDDEDH SEGDAPP KTFKKD ++TDEIVVCE+SKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG SLSLDQWNVL NHVEEIDKAVNEN
Subjt:  MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI8.9e-2962.62Show/hide
Query:  MSSSGKRKDDE----DHVSEGDAPPSKTFK--KDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID
        MSS GKRKD++    D  SE  AP  K  K   D D +D+IVVC +SKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+
Subjt:  MSSSGKRKDDE----DHVSEGDAPPSKTFK--KDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

O65155 RNA polymerase II transcriptional coactivator KELP1.3e-1139Show/hide
Query:  SSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS
        +S   K++ED    GD    K   K+ DD  ++++C LS  RRV ++ ++GK +V IRE+Y KDGK++P  KGISL+ +QW+    ++  I+ AV +  S
Subjt:  SSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS

Q5ZK63 Activated RNA polymerase II transcriptional coactivator p152.7e-0936.9Show/hide
Query:  GDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        G++       K   + DE +  ++ K R V VR+++GK+++DIRE+++ ++G+  PG+KGISL+ +QWN L   + +ID AV +
Subjt:  GDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Q63396 Activated RNA polymerase II transcriptional coactivator p156.0e-0934.52Show/hide
Query:  GDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE
        G++  +    K    + +  + ++ K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV +
Subjt:  GDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNE

Q9VLR5 RNA polymerase II transcriptional coactivator4.6e-0940.82Show/hide
Query:  SSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDE--IVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV
        S S    DD    +   A  S     DP D+ E       L   R+V +  ++G+  VDIREFY K G+ +PGKKGISLSL QW  LL   EE+ +A+
Subjt:  SSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDE--IVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV

Arabidopsis top hitse value%identityAlignment
AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)9.2e-1339Show/hide
Query:  SSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS
        +S   K++ED    GD    K   K+ DD  ++++C LS  RRV ++ ++GK +V IRE+Y KDGK++P  KGISL+ +QW+    ++  I+ AV +  S
Subjt:  SSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS

AT5G09240.1 ssDNA-binding transcriptional regulator5.4e-2152.29Show/hide
Query:  MSSSGKRKD------DEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEE
        MS +GKRKD      D+   SE  APP K   K  D+ ++I +C L KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+QWN L NH E+
Subjt:  MSSSGKRKD------DEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEE

Query:  IDKAVNENS
        IDKA++E S
Subjt:  IDKAVNENS

AT5G09240.2 ssDNA-binding transcriptional regulator1.8e-1641.61Show/hide
Query:  MSSSGKRKD------DEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLD-----------
        MS +GKRKD      D+   SE  APP K   K  D+ ++I +C L KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+           
Subjt:  MSSSGKRKD------DEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGISLSLD-----------

Query:  -----------------QWNVLLNHVEEIDKAVNENS
                         QWN L NH E+IDKA++E S
Subjt:  -----------------QWNVLLNHVEEIDKAVNENS

AT5G09250.1 ssDNA-binding transcriptional regulator6.3e-3062.62Show/hide
Query:  MSSSGKRKDDE----DHVSEGDAPPSKTFK--KDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID
        MSS GKRKD++    D  SE  AP  K  K   D D +D+IVVC +SKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+
Subjt:  MSSSGKRKDDE----DHVSEGDAPPSKTFK--KDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

AT5G09250.2 ssDNA-binding transcriptional regulator1.0e-1962.96Show/hide
Query:  MSSSGKRKDDE----DHVSEGDAPPSKTFK--KDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSS GKRKD++    D  SE  AP  K  K   D D +D+IVVC +SKNRRV VRNW GKI +DIREFYVKDGK +PGKKG
Subjt:  MSSSGKRKDDE----DHVSEGDAPPSKTFK--KDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCAAGTGGAAAGCGAAAGGACGACGAAGATCACGTATCCGAAGGAGATGCTCCTCCTTCCAAAACATTCAAGAAAGATCCTGACGATACCGATGAAATCGTCGT
TTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAACTGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGA
AAGGCATCTCGCTATCCTTGGATCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAAAACTCGTCAGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCAAGTGGAAAGCGAAAGGACGACGAAGATCACGTATCCGAAGGAGATGCTCCTCCTTCCAAAACATTCAAGAAAGATCCTGACGATACCGATGAAATCGTCGT
TTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAACTGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGA
AAGGCATCTCGCTATCCTTGGATCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAAAACTCGTCAGAAGATTAG
Protein sequenceShow/hide protein sequence
MSSSGKRKDDEDHVSEGDAPPSKTFKKDPDDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSED