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PI0012919 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012919
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:11213014..11213885
RNA-Seq ExpressionPI0012919
SyntenyPI0012919
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035461.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-3537.97Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----
        MKVT +EE ND++T+KLDELFGSL+TFEL   +   +K  G+AL S+ +E T+ ++ S +    +D++ +       SS      +RR++++R+      
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----

Query:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLH
        SK  + D+G +C ECEGFG+ Q KC ++LKRKKKS+  T S++E    SD +E   AL   + +N   V   N    D   S  D +     N+S   L 
Subjt:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLH

Query:  LKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
         KW+ DQ ++  Q++ IQ ++++N   L+ I TLK ELK  R  FE L+K +KML+  TQ L +++
Subjt:  LKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

KAA0053130.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.2e-3641.57Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----
        MKVT  +E ND+  +KLDELFGSL+TFEL   +   KK  GVA  S                            N  SS    +   RREN++       
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----

Query:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTD-DGAESGITNQSIDQL
        SK+ R  R  +C E +GF +YQA+C +FLK K+K + VTLSDDE+  DS+S++  RAL   + +N      G+  QK      D  G    IT+   D L
Subjt:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTD-DGAESGITNQSIDQL

Query:  HLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
          KWE  QIVLKQQK+RIQA++++NH L++ I+ LK ELK  R +FE LSKFVKML+  T++L+++L
Subjt:  HLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

KAA0056406.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.1e-3537.88Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS
        MKVT ++E ND++ +KLDELF SL+TFEL   +   K+  G+AL S+ +E  ++++ S ++E++ ++I L TK  NY          R E D  T  K  
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS

Query:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQ--LHLK
        +  +G KC ECEGFG+ Q++C ++LKRKKKS+  TLSD+E+  +SD++E    L   ++ N       N    ++ +S     ++ + N+S+++  L  K
Subjt:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQ--LHLK

Query:  WEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
        WE DQ  +  Q++RIQ ++++N   L+ I TLK ELK  R  FE LSK +KM++  T  L+++L
Subjt:  WEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

KAA0066403.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.1e-3539.08Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPT----------KHNNYSSPKFFSS---FR
        MKVT +EE +DI TLKLDELFGSL TFE+T  D   KKGKG+A  S+   +  +  +   + N+D++IAL T          K++N +     +S    R
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPT----------KHNNYSSPKFFSS---FR

Query:  RREND---RNTNSKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAE
        R +ND   RN  +   +ID   K +ECEG  +YQA+CP+FL+++KK+  V+LSD+ES+   DS++D+R +       +T          D+N  TDD +E
Subjt:  RREND---RNTNSKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAE

Query:  SGITNQ----SIDQLHLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKS
          I ++    SI++L   W+ D      QK+RIQ +LK+N RL+++IS+LK +L+ V+ + + + KFVKML+  T++L+++LK+
Subjt:  SGITNQ----SIDQLHLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKS

XP_016903608.1 PREDICTED: uncharacterized protein LOC107992254 [Cucumis melo]3.5e-3437.88Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS
        MKVT +EE  DI TLKLDELFGSL TFE+   D   KKGK +A  S+ D++   N +S ++ N D+++AL TK         FS   R+ N  +   K  
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS

Query:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLHLKWE
         +   F+CRECEG G+YQA+CP++L R+KK+   TLSD+ES  D D    N A   C+ +     +      +  N++ D+         ++++L +  +
Subjt:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLHLKWE

Query:  ADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKS
         D      QK+RIQ ++ +N RL+ +IS+LK +LK V+  ++   K VKML++ T SL+++L S
Subjt:  ADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKS

TrEMBL top hitse value%identityAlignment
A0A5A7T1K8 Gag-pol polyprotein8.9e-3637.97Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----
        MKVT +EE ND++T+KLDELFGSL+TFEL   +   +K  G+AL S+ +E T+ ++ S +    +D++ +       SS      +RR++++R+      
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----

Query:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLH
        SK  + D+G +C ECEGFG+ Q KC ++LKRKKKS+  T S++E    SD +E   AL   + +N   V   N    D   S  D +     N+S   L 
Subjt:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLH

Query:  LKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
         KW+ DQ ++  Q++ IQ ++++N   L+ I TLK ELK  R  FE L+K +KML+  TQ L +++
Subjt:  LKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

A0A5A7UD40 Gag-pol polyprotein1.1e-3641.57Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----
        MKVT  +E ND+  +KLDELFGSL+TFEL   +   KK  GVA  S                            N  SS    +   RREN++       
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTN----

Query:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTD-DGAESGITNQSIDQL
        SK+ R  R  +C E +GF +YQA+C +FLK K+K + VTLSDDE+  DS+S++  RAL   + +N      G+  QK      D  G    IT+   D L
Subjt:  SKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTD-DGAESGITNQSIDQL

Query:  HLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
          KWE  QIVLKQQK+RIQA++++NH L++ I+ LK ELK  R +FE LSKFVKML+  T++L+++L
Subjt:  HLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

A0A5A7VE51 Gag-proteinase polyprotein1.5e-3539.08Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPT----------KHNNYSSPKFFSS---FR
        MKVT +EE +DI TLKLDELFGSL TFE+T  D   KKGKG+A  S+   +  +  +   + N+D++IAL T          K++N +     +S    R
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPT----------KHNNYSSPKFFSS---FR

Query:  RREND---RNTNSKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAE
        R +ND   RN  +   +ID   K +ECEG  +YQA+CP+FL+++KK+  V+LSD+ES+   DS++D+R +       +T          D+N  TDD +E
Subjt:  RREND---RNTNSKSSRIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAE

Query:  SGITNQ----SIDQLHLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKS
          I ++    SI++L   W+ D      QK+RIQ +LK+N RL+++IS+LK +L+ V+ + + + KFVKML+  T++L+++LK+
Subjt:  SGITNQ----SIDQLHLKWEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKS

A0A5D3BVP0 Gag-pol polyprotein1.7e-3437.12Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS
        MKVT +EE ND++T+KLDELFGSL+TFEL   +   +K  G+AL S+ +E T++++ S ++++L +++ L TK             ++ + D N  SK  
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS

Query:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQ--LHLK
        +   G +C ECEGFG+ Q +C  +LK KKKS+  T SD+E   +SD +E    L       ++   E     ++ N  T D  ES + + S D+  L  K
Subjt:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQ--LHLK

Query:  WEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
        W+ DQ ++  Q++RIQ ++++N   L+ I TLK ELK  +  FE L+K+VKML+  T+ L++++
Subjt:  WEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

A0A5D3DZR7 Gag-pol polyprotein1.5e-3537.88Show/hide
Query:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS
        MKVT ++E ND++ +KLDELF SL+TFEL   +   K+  G+AL S+ +E  ++++ S ++E++ ++I L TK  NY          R E D  T  K  
Subjt:  MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSS

Query:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQ--LHLK
        +  +G KC ECEGFG+ Q++C ++LKRKKKS+  TLSD+E+  +SD++E    L   ++ N       N    ++ +S     ++ + N+S+++  L  K
Subjt:  RIDRGFKCRECEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQ--LHLK

Query:  WEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL
        WE DQ  +  Q++RIQ ++++N   L+ I TLK ELK  R  FE LSK +KM++  T  L+++L
Subjt:  WEADQIVLKQQKDRIQAMLKDNHRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTACAAGGGTTGAGGAAGTAAATGACATTGCTACTTTAAAGCTGGATGAATTGTTTGGATCGTTACAAACATTTGAGCTTACTTTTGATGACCATGGTGACAA
GAAAGGCAAGGGTGTGGCCTTGCATTCGATTGATGATGAAGATACACAGCAGAATAGAGAGTCTCATCATGATGAAAATTTAGATGATACTATAGCTCTTCCGACCAAAC
ACAACAACTATTCAAGCCCCAAATTTTTCTCTTCATTTAGACGTAGAGAAAATGACAGGAACACAAATAGTAAATCTTCCCGAATTGACAGAGGCTTTAAATGTCGGGAG
TGTGAAGGTTTTGGATACTATCAAGCGAAGTGTCCGAGCTTTCTAAAAAGGAAAAAGAAAAGTATGACAGTTACACTATCAGATGATGAGTCAATCATTGATAGTGATTC
TAAGGAAGACAACAGAGCCTTGTTTGGGTGTGTTGCAAAGAATGTAACCTTTGTAGTTGAAGGCAATATGCCTCAAAAGGATGATAATGTCAGTACTGATGATGGTGCTG
AGTCTGGAATTACTAACCAGAGTATTGATCAGTTGCACCTAAAGTGGGAAGCAGATCAGATTGTGCTGAAGCAACAAAAGGATCGGATTCAGGCCATGTTGAAAGATAAT
CATCGACTGCTAACCATGATATCCACTCTGAAATTTGAGTTGAAAGTTGTTCGTATGGACTTTGAAGCCCTATCCAAGTTTGTCAAGATGCTAAGTTTCGACACACAAAG
TCTGAACAATGTTCTAAAAAGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTACAAGGGTTGAGGAAGTAAATGACATTGCTACTTTAAAGCTGGATGAATTGTTTGGATCGTTACAAACATTTGAGCTTACTTTTGATGACCATGGTGACAA
GAAAGGCAAGGGTGTGGCCTTGCATTCGATTGATGATGAAGATACACAGCAGAATAGAGAGTCTCATCATGATGAAAATTTAGATGATACTATAGCTCTTCCGACCAAAC
ACAACAACTATTCAAGCCCCAAATTTTTCTCTTCATTTAGACGTAGAGAAAATGACAGGAACACAAATAGTAAATCTTCCCGAATTGACAGAGGCTTTAAATGTCGGGAG
TGTGAAGGTTTTGGATACTATCAAGCGAAGTGTCCGAGCTTTCTAAAAAGGAAAAAGAAAAGTATGACAGTTACACTATCAGATGATGAGTCAATCATTGATAGTGATTC
TAAGGAAGACAACAGAGCCTTGTTTGGGTGTGTTGCAAAGAATGTAACCTTTGTAGTTGAAGGCAATATGCCTCAAAAGGATGATAATGTCAGTACTGATGATGGTGCTG
AGTCTGGAATTACTAACCAGAGTATTGATCAGTTGCACCTAAAGTGGGAAGCAGATCAGATTGTGCTGAAGCAACAAAAGGATCGGATTCAGGCCATGTTGAAAGATAAT
CATCGACTGCTAACCATGATATCCACTCTGAAATTTGAGTTGAAAGTTGTTCGTATGGACTTTGAAGCCCTATCCAAGTTTGTCAAGATGCTAAGTTTCGACACACAAAG
TCTGAACAATGTTCTAAAAAGCTGGTAA
Protein sequenceShow/hide protein sequence
MKVTRVEEVNDIATLKLDELFGSLQTFELTFDDHGDKKGKGVALHSIDDEDTQQNRESHHDENLDDTIALPTKHNNYSSPKFFSSFRRRENDRNTNSKSSRIDRGFKCRE
CEGFGYYQAKCPSFLKRKKKSMTVTLSDDESIIDSDSKEDNRALFGCVAKNVTFVVEGNMPQKDDNVSTDDGAESGITNQSIDQLHLKWEADQIVLKQQKDRIQAMLKDN
HRLLTMISTLKFELKVVRMDFEALSKFVKMLSFDTQSLNNVLKSW