; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0012922 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012922
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-binding protein 24-A
Genome locationchr03:6562287..6565705
RNA-Seq ExpressionPI0012922
SyntenyPI0012922
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045404.1 RNA-binding protein 24-A [Cucumis melo var. makuwa]7.6e-16399.65Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+GTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

KAG6599081.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-15592.95Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHG GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPISY  GRLR PAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP 
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG--NEVGTIEDVF
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG  N +  I + F
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG--NEVGTIEDVF

XP_004146763.1 RNA-binding protein 24-A [Cucumis sativus]4.5e-16399.65Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPP+SYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_008464801.1 PREDICTED: RNA-binding protein 24-A [Cucumis melo]7.6e-16399.65Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+GTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_022946505.1 RNA-binding protein 24-A [Cucurbita moschata]4.5e-15595.8Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHG GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPISY  GRLR PAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP 
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

TrEMBL top hitse value%identityAlignment
A0A0A0KHA9 RRM domain-containing protein2.1e-15899.64Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPP+SYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQ

A0A1S3CME8 RNA-binding protein 24-A3.7e-16399.65Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+GTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A5D3CHF9 RNA-binding protein 24-A3.7e-16399.65Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+GTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1G3W1 RNA-binding protein 24-A2.2e-15595.8Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHG GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPISY  GRLR PAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP 
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1KGG8 RNA-binding protein 24-A4.1e-15494.76Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHG GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKN+GRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPISY  GRLR PAVYVGGMQPNRG Y GNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP 
Subjt:  RANCNLASLGRPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGY MPSPQI+QF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 244.4e-2838.74Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG           R+ QP 
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA

Query:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHG
           G  Q +       FG   P  Y Y Q    P    P+   T       P   Y  + G  Y Q Y    +A+     Y Q      P   GY    G
Subjt:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHG

Query:  YAMPSPQILQFSGPNVNALTSS
        Y+    Q +  + P   A  ++
Subjt:  YAMPSPQILQFSGPNVNALTSS

Q5ZMA3 RNA-binding protein 241.7e-2738.01Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG           R+ QP 
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA

Query:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGY
           G  Q +       FG   P  Y Y Q    P    P+           P  GY      QY        SA+   Y       +     GY A  GY
Subjt:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGY

Query:  AMPSPQILQFSGPNVNALTSS
             Q +  + P   A  ++
Subjt:  AMPSPQILQFSGPNVNALTSS

Q6GQD3 RNA-binding protein 24-A5.2e-2938.71Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG           R+ QP 
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA

Query:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPS
           G  Q +       FG   P  Y Y Q    P        P        Y  +    Y Q      +A+   Y Y       P   GY    GY    
Subjt:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPS

Query:  PQILQFSGPNVNALTSS
        PQ L  + P   A  ++
Subjt:  PQILQFSGPNVNALTSS

Q9BX46 RNA-binding protein 242.6e-2839.19Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA
        DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG           R+ QP 
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGTGRLRQPA

Query:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHG
           G  Q +       FG   P  Y Y Q    P    P+   T       P   Y  + G  Y Q Y    +A+     Y Q      P   GY    G
Subjt:  VYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHG

Query:  YAMPSPQILQFSGPNVNALTSS
        Y     Q +  + P   A  ++
Subjt:  YAMPSPQILQFSGPNVNALTSS

Q9M1S3 Probable RNA-binding protein ARP19.4e-3144.13Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI
        ++S  +N  FGDT  TKVFVGGLAW+T  E M  +F ++G+ILEAV+I+DK T RSKGYGFVTF+D ++A RAC D TPII+GRRANCNLASLG      
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI

Query:  SYGTGRLRQPAVYV----GGMQPNRGT--YIGNFG-YQQPVSYAYQQ-----GLAYPPYGYATYGPEYVYPQGGYNPFVGQ--------QYLQIYGVPGS
            GRLR+         G    NR T  ++GN   +  P  +  QQ       A P YGY +    YV P   +N  VG          Y Q+   P S
Subjt:  SYGTGRLRQPAVYV----GGMQPNRGT--YIGNFG-YQQPVSYAYQQ-----GLAYPPYGYATYGPEYVYPQGGYNPFVGQ--------QYLQIYGVPGS

Query:  -ASPTIYHYGQLG
           P  YH+   G
Subjt:  -ASPTIYHYGQLG

Arabidopsis top hitse value%identityAlignment
AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-9061.57Show/hide
Query:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP
        S  SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR 
Subjt:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP

Query:  RPPISYGT-----GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG
        RPP+ Y       GR+R P+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YGP+Y+Y   QG Y P++GQQYLQ+YGVPG+ +   Y YG
Subjt:  RPPISYGT-----GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG

Query:  QLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        QL  T+PG HGY A  GY+ P   +LQ          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Subjt:  QLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

AT1G20880.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-9061.57Show/hide
Query:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP
        S  SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR 
Subjt:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP

Query:  RPPISYGT-----GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG
        RPP+ Y       GR+R P+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YGP+Y+Y   QG Y P++GQQYLQ+YGVPG+ +   Y YG
Subjt:  RPPISYGT-----GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG

Query:  QLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        QL  T+PG HGY A  GY+ P   +LQ          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Subjt:  QLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.3e-5045.55Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI
        S++ +  SPFGDTT+TKVFVGGLAWET ++ MRRYF+QFGEILEAV+ITDK TG+SKGYGFVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP  
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI

Query:  SYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQ-QYL--QIYGVPGSASPTI-------YHYGQ
          G G+   P+ Y GG Q +        G   PV  A    L YP YGY TY  EY Y Q  YN  + Q QY   Q+YG  G+ SP+        Y+Y Q
Subjt:  SYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQ-QYL--QIYGVPGSASPTI-------YHYGQ

Query:  LGQTVPGGH---GYGAVH--------GYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSGN
             P  H    Y   H           +PS         NV A T S +PT Q P  S   +     PQ V     +F      + T+ N
Subjt:  LGQTVPGGH---GYGAVH--------GYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSGN

AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.7e-10565.07Show/hide
Query:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQ  PG        S   +LNSPFGDTT+TKVFVGGLAWETQSET+R++FEQ+GEILEAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGR
Subjt:  MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGT-----GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGV
        RANCNLASLGRPRPP+ Y       GRLR  + Y+G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PYG   YGPEY+Y   QG Y+P++GQQYLQ+YGV
Subjt:  RANCNLASLGRPRPPISYGT-----GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGV

Query:  PGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS
        PG+ +  +Y YGQL QT+P GHGY AV GY++P   ILQ  GP V+ +T+S MP +QAPYPSGIP P   Q   +VHSP QF+Q + SDQT+
Subjt:  PGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS

AT1G78260.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-4849.21Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI
        S + +  SPFGDTTYTKVFVGGLAWET ++ MRRYFEQFGEILEAV+ITDKNTG+SKGYGFVTFR+ +SA RA ADP P+IDGR+ANCN+AS GRPRP  
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI

Query:  SYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGP-EYVYPQGGYNPFVG-----QQYLQIYG----VPGSASPTI----Y
          G G+   P+ Y  G      TY    G   P+  A    L YP YGY TY P ++ Y Q  YN  +      QQ  Q+YG     P S+  TI    Y
Subjt:  SYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGP-EYVYPQGGYNPFVG-----QQYLQIYG----VPGSASPTI----Y

Query:  HYGQLGQT--VPGGHGYGAVHGYAMPSPQILQFSGPN--VNALTSSPMPTIQ
        +YG   Q   VP  H +     Y        +FS P+  V    SS  P +Q
Subjt:  HYGQLGQT--VPGGHGYGAVHGYAMPSPQILQFSGPN--VNALTSSPMPTIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATCAGCATGGTCCGGGTCCTAGTTCCATATCTGGATCAAGTTCGAGTTCTGGGTTCTTGAACTCTCCTTTTGGTGATACCACTTACACCAAGGTCTTTGTTGG
TGGGTTGGCCTGGGAGACTCAGAGCGAGACTATGAGGCGCTACTTTGAGCAGTTTGGGGAGATTCTTGAGGCTGTTGTTATAACGGATAAGAATACAGGGAGATCCAAAG
GATATGGTTTTGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCAGACCCTACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGC
CGGCCTCGTCCACCTATATCTTATGGAACAGGACGTTTAAGACAGCCTGCAGTGTATGTTGGAGGCATGCAACCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCA
ACAACCGGTTTCCTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTTGTGG
GTCAGCAATACCTGCAGATTTATGGAGTGCCTGGGTCAGCAAGCCCTACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGTTATGGAGCAGTA
CATGGATATGCGATGCCAAGTCCTCAGATTTTGCAGTTTAGTGGTCCTAATGTTAATGCATTAACATCTTCTCCAATGCCTACTATTCAGGCACCATATCCTTCAGGGAT
TCCAGCACCTGTTGCAGCACAGCCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGAAATGAGGTTGGTACAATTGAAG
ATGTGTTTGGATACTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATCAGCATGGTCCGGGTCCTAGTTCCATATCTGGATCAAGTTCGAGTTCTGGGTTCTTGAACTCTCCTTTTGGTGATACCACTTACACCAAGGTCTTTGTTGG
TGGGTTGGCCTGGGAGACTCAGAGCGAGACTATGAGGCGCTACTTTGAGCAGTTTGGGGAGATTCTTGAGGCTGTTGTTATAACGGATAAGAATACAGGGAGATCCAAAG
GATATGGTTTTGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCAGACCCTACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGC
CGGCCTCGTCCACCTATATCTTATGGAACAGGACGTTTAAGACAGCCTGCAGTGTATGTTGGAGGCATGCAACCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCA
ACAACCGGTTTCCTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTTGTGG
GTCAGCAATACCTGCAGATTTATGGAGTGCCTGGGTCAGCAAGCCCTACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGTTATGGAGCAGTA
CATGGATATGCGATGCCAAGTCCTCAGATTTTGCAGTTTAGTGGTCCTAATGTTAATGCATTAACATCTTCTCCAATGCCTACTATTCAGGCACCATATCCTTCAGGGAT
TCCAGCACCTGTTGCAGCACAGCCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGAAATGAGGTTGGTACAATTGAAG
ATGTGTTTGGATACTCATAA
Protein sequenceShow/hide protein sequence
MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG
RPRPPISYGTGRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAV
HGYAMPSPQILQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSGNEVGTIEDVFGYS