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PI0012935 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012935
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description60S ribosomal protein L7a
Genome locationchr10:3288057..3288389
RNA-Seq ExpressionPI0012935
SyntenyPI0012935
Gene Ontology termsGO:0000470 - maturation of LSU-rRNA (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001921 - Ribosomal protein L7A/L8
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065509.1 60S ribosomal protein L7a-2-like isoform X2 [Cucumis melo var. makuwa]6.7e-2376.92Show/hide
Query:  KQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG
        KQRLKI PS NQFTKTFDKN ATNLFKMLLKYR          WSSAGFLKSFK NFNK D++ KKWGGGNHGLQVLG
Subjt:  KQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG

KCW83216.1 hypothetical protein EUGRSUZ_B00159 [Eucalyptus grandis]1.4e-1552.21Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR--------------------WSSAGFLKSFKANFN-KD
        PKR   R     FVK+PK V+IQRK+ IL+QRLK+ P+LNQFTKT DKN ATNLFKMLLKYR                       +  L++ KANFN K 
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR--------------------WSSAGFLKSFKANFN-KD

Query:  DENKKKWGGGNHG
        DE +KKWGGG  G
Subjt:  DENKKKWGGGNHG

XP_008464759.1 PREDICTED: uncharacterized protein LOC103502565 [Cucumis melo]4.2e-2575.29Show/hide
Query:  QRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG
        +RKKG+ KQRLKI PS NQFTKTFDKN ATNLFKMLLKYR          WSSAGFLKSFK NFNK D++ KKWGGGNHGLQVLG
Subjt:  QRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG

XP_011651548.1 60S ribosomal protein L7a-2 isoform X2 [Cucumis sativus]2.6e-1475.81Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        PKR   R     FVKWPKVV+IQRKK ILKQRLK+ P+LNQFTKT DKN ATNLFKMLLKYR
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

XP_038875632.1 60S ribosomal protein L7a-2-like [Benincasa hispida]2.6e-1475.81Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        PKR   R     FVKWPKVV+IQRKK ILKQRLK+ P+LNQFTKT DKN ATNLFKMLLKYR
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

TrEMBL top hitse value%identityAlignment
A0A059CYF1 60S ribosomal protein L7a6.6e-1652.21Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR--------------------WSSAGFLKSFKANFN-KD
        PKR   R     FVK+PK V+IQRK+ IL+QRLK+ P+LNQFTKT DKN ATNLFKMLLKYR                       +  L++ KANFN K 
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR--------------------WSSAGFLKSFKANFN-KD

Query:  DENKKKWGGGNHG
        DE +KKWGGG  G
Subjt:  DENKKKWGGGNHG

A0A1S3CM74 60S ribosomal protein L7a2.0e-2575.29Show/hide
Query:  QRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG
        +RKKG+ KQRLKI PS NQFTKTFDKN ATNLFKMLLKYR          WSSAGFLKSFK NFNK D++ KKWGGGNHGLQVLG
Subjt:  QRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG

A0A5A7VJ69 60S ribosomal protein L7a3.3e-2376.92Show/hide
Query:  KQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG
        KQRLKI PS NQFTKTFDKN ATNLFKMLLKYR          WSSAGFLKSFK NFNK D++ KKWGGGNHGLQVLG
Subjt:  KQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR----------WSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG

A0A5D3DB00 60S ribosomal protein L7a1.2e-1475.81Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        PKR   R     FVKWPKVV+IQRKK ILKQRLK+ P+LNQFTKT DKN ATNLFKMLLKYR
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

A0A5D3DBR0 60S ribosomal protein L7a1.2e-1475.81Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        PKR   R     FVKWPKVV+IQRKK ILKQRLK+ P+LNQFTKT DKN ATNLFKMLLKYR
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

SwissProt top hitse value%identityAlignment
P0DKK7 60S ribosomal protein L7a-26.4e-1669.35Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        PK+   R     FVKWPKVV+IQR++ ILKQRLK+ P+LNQFT+T DKN ATNLFKMLLKYR
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

P35685 60S ribosomal protein L7a-16.4e-1669.35Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        PK+   R     FVKWPKVV+IQR++ ILKQRLK+ P+LNQFT+T DKN ATNLFKMLLKYR
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

P49692 60S ribosomal protein L7a-15.9e-1467.92Show/hide
Query:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        L  ++KWPK +++QR+K ILKQRLK+ P+LNQFTKT DKN AT+LFK+LLKYR
Subjt:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

Q54ZD1 60S ribosomal protein L7a4.0e-1046.48Show/hide
Query:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYRWSSAGFLKS
        PKR      L  F  WP+ +K+QR++ +L +RLK+ P++NQFT+ FDKN A +LFK+L KYR   A   K+
Subjt:  PKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYRWSSAGFLKS

Q9LZH9 60S ribosomal protein L7a-25.9e-1467.92Show/hide
Query:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        L  ++KWPK +++QR+K ILKQRLK+ P+LNQFTKT DKN AT+LFK+LLKYR
Subjt:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

Arabidopsis top hitse value%identityAlignment
AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.2e-1567.92Show/hide
Query:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        L  ++KWPK +++QR+K ILKQRLK+ P+LNQFTKT DKN AT+LFK+LLKYR
Subjt:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.2e-1567.92Show/hide
Query:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR
        L  ++KWPK +++QR+K ILKQRLK+ P+LNQFTKT DKN AT+LFK+LLKYR
Subjt:  LKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCCAAAAAGAAGCTGGAGAAGGTGGATTCTTAAATGGTTTGTAAAATGGCCAAAAGTTGTTAAAATTCAGAGGAAGAAGGGGATTCTTAAACAGAGGTTGAA
GATTTCACCATCTTTGAATCAGTTCACTAAGACCTTCGACAAAAATTTTGCAACTAACCTGTTCAAGATGCTTTTGAAATATAGGTGGAGTTCAGCAGGATTCTTGAAGT
CATTTAAGGCAAATTTCAACAAGGACGATGAGAACAAGAAGAAGTGGGGTGGTGGAAATCATGGGCTCCAAGTCTTAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGCCAAAAAGAAGCTGGAGAAGGTGGATTCTTAAATGGTTTGTAAAATGGCCAAAAGTTGTTAAAATTCAGAGGAAGAAGGGGATTCTTAAACAGAGGTTGAA
GATTTCACCATCTTTGAATCAGTTCACTAAGACCTTCGACAAAAATTTTGCAACTAACCTGTTCAAGATGCTTTTGAAATATAGGTGGAGTTCAGCAGGATTCTTGAAGT
CATTTAAGGCAAATTTCAACAAGGACGATGAGAACAAGAAGAAGTGGGGTGGTGGAAATCATGGGCTCCAAGTCTTAGGCTAA
Protein sequenceShow/hide protein sequence
MAWPKRSWRRWILKWFVKWPKVVKIQRKKGILKQRLKISPSLNQFTKTFDKNFATNLFKMLLKYRWSSAGFLKSFKANFNKDDENKKKWGGGNHGLQVLG