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PI0012940 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012940
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptioncell number regulator 2-like
Genome locationchr10:5968662..5971902
RNA-Seq ExpressionPI0012940
SyntenyPI0012940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006461 - PLAC8 motif-containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDD67543.1 Lsfw2.2 protein [Lagenaria siceraria]2.4e-7286.21Show/hide
Query:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW
        G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN LIF+LIAS TPCICLYT SYRSRLR KY L+ETPCNDCCVH WCW
Subjt:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW

Query:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        SCAMCQEYRELK+RGFDMHIGWQENVQRR +GIEIPP V GQM R
Subjt:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

XP_004142270.1 cell number regulator 2 [Cucumis sativus]1.7e-7889.4Show/hide
Query:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC
        MG+DD GFL NS NESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIF LIA+ TPCICLYT SYRSRLR+KYNL+ETPCNDCC
Subjt:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC

Query:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        VHCWCWSCAMCQEYREL+NRGF+MHIGWQEN+QR  KGIEIPPTV GQMKR
Subjt:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

XP_008452392.1 PREDICTED: cell number regulator 2-like [Cucumis melo]4.5e-7184.14Show/hide
Query:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW
        G   NS N SPWSSGLCDCFSD+GSCCCT WCPCVPFGQASEIIDEGSTSCFGN LIF LIAS TPCICLYT SYRSRLR KYNL+ETPCNDCCVH WCW
Subjt:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW

Query:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        SCA+CQE+RELKNRGF+MHIGWQENVQRR +  +IPPTV GQMKR
Subjt:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

XP_008464696.1 PREDICTED: cell number regulator 2-like [Cucumis melo]3.1e-8091.39Show/hide
Query:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC
        MG+DD GFLTNS+NESPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN LIF LIAS TPCICLYT SYRSRLRRKYNL+ETPCNDCC
Subjt:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC

Query:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        VHCWCWSCAMCQEYRELKNRGF+MHIGWQENVQR+ KGIEIPPTV GQMKR
Subjt:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

XP_038892870.1 cell number regulator 2-like [Benincasa hispida]2.4e-7286.21Show/hide
Query:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW
        G   NS N SPWSSGLCDCFSDM SCCCT WCPCVPFGQ SEIIDEGSTSCFGN LIF LIAS TPCICLYT SYRSRLRRKYNL+ETPCNDCCVH WCW
Subjt:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW

Query:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        SCA+CQEYRELK+RGFDMHIGWQENVQRR KGIEIPP V G+MKR
Subjt:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

TrEMBL top hitse value%identityAlignment
A0A0A0KIS6 Uncharacterized protein8.3e-7989.4Show/hide
Query:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC
        MG+DD GFL NS NESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIF LIA+ TPCICLYT SYRSRLR+KYNL+ETPCNDCC
Subjt:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC

Query:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        VHCWCWSCAMCQEYREL+NRGF+MHIGWQEN+QR  KGIEIPPTV GQMKR
Subjt:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

A0A1S3BT42 cell number regulator 2-like2.2e-7184.14Show/hide
Query:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW
        G   NS N SPWSSGLCDCFSD+GSCCCT WCPCVPFGQASEIIDEGSTSCFGN LIF LIAS TPCICLYT SYRSRLR KYNL+ETPCNDCCVH WCW
Subjt:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW

Query:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        SCA+CQE+RELKNRGF+MHIGWQENVQRR +  +IPPTV GQMKR
Subjt:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

A0A1S3CM72 cell number regulator 2-like1.5e-8091.39Show/hide
Query:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC
        MG+DD GFLTNS+NESPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN LIF LIAS TPCICLYT SYRSRLRRKYNL+ETPCNDCC
Subjt:  MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCC

Query:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        VHCWCWSCAMCQEYRELKNRGF+MHIGWQENVQR+ KGIEIPPTV GQMKR
Subjt:  VHCWCWSCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

A0A4Y5UXT8 Lsfw2.2 protein1.2e-7286.21Show/hide
Query:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW
        G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN LIF+LIAS TPCICLYT SYRSRLR KY L+ETPCNDCCVH WCW
Subjt:  GFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCW

Query:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        SCAMCQEYRELK+RGFDMHIGWQENVQRR +GIEIPP V GQM R
Subjt:  SCAMCQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

A0A4Y5UYC6 Lsfw2.2 protein8.9e-6581.88Show/hide
Query:  NESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQE
        N SPWSSGLCDCFSDM SCCCT WCPCV FG+ASEIIDEGSTSCF N LIF LIAS TPCICLYT SYRSRLRRKYNL+E+PCNDCCVH  CW+CA+CQE
Subjt:  NESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQE

Query:  YRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR
        YRELKN GFDMHIGWQ+NVQ+R KG+EIPP V G M R
Subjt:  YRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR

SwissProt top hitse value%identityAlignment
B6TYV8 Cell number regulator 25.6e-4051.85Show/hide
Query:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYREL
        WS+GLC+CF D  +CC T  CPC+ FGQ +EIID GSTSC  +G ++ L+   T C C+Y+  YR+++R +Y L+ +PC+DCCVHC C  CA+CQEYREL
Subjt:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYREL

Query:  KNRGFDMHIGWQENVQRRTK-GIEIPPTVLGQMKR
        K RGFDM IGW  N++R+ +    +PP +   M R
Subjt:  KNRGFDMHIGWQENVQRRTK-GIEIPPTVLGQMKR

B6TZ45 Cell number regulator 13.5e-3449.23Show/hide
Query:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYREL
        WS+GL  C  D G+C  T  CPCV FGQ ++I+D+G+  C  +GL++ LI + T   CLY+  YRS+LR +Y+L+E  C D  VHC C   A+CQEYREL
Subjt:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYREL

Query:  KNRGFDMHIGWQENVQRRTKGIEIPPTVLG
        KNRGFD+ IGW+ N+ R+ +G+     V+G
Subjt:  KNRGFDMHIGWQENVQRRTKGIEIPPTVLG

D9HP25 Cell number regulator 94.6e-3449.63Show/hide
Query:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYREL
        WSSGLC C  D G CC T WCPC+ FG+ +EI+D G+TSC   G I+ L+A  T C  +Y+ +YRSR+R +  L E  C DCCVH  C  CA+ Q+YREL
Subjt:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYREL

Query:  KNRGFDMHIGWQENVQRRTKGIEI-PPTVLGQMKR
        K RGFD  +GW  N Q+      + PP   G M R
Subjt:  KNRGFDMHIGWQENVQRRTKGIEI-PPTVLGQMKR

P0CW97 Protein PLANT CADMIUM RESISTANCE 32.7e-3449.6Show/hide
Query:  NSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAM
        N   E  WS+G CDCFSD  +CC T  CPC+ FGQ ++I+D G+TSC   G ++ L+A+ T C CLY+  YR ++R +YN+    C DC  H  C  CA+
Subjt:  NSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAM

Query:  CQEYRELKNRGFDMHIGWQENVQRR
         QEYRELK+RGFDM +GW  NV+++
Subjt:  CQEYRELKNRGFDMHIGWQENVQRR

Q9LQU4 Protein PLANT CADMIUM RESISTANCE 28.3e-3651.24Show/hide
Query:  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEY
        E  WS+G CDCFSD  +CC T WCPC+ FGQ +EI+D GSTSC   G ++ LIA  T C C+Y+  YR ++R +YN++   C DC  H  C  C++ Q+Y
Subjt:  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEY

Query:  RELKNRGFDMHIGWQENVQRR
        RELK+RG+DM +GW  NV+R+
Subjt:  RELKNRGFDMHIGWQENVQRR

Arabidopsis top hitse value%identityAlignment
AT1G14870.1 PLANT CADMIUM RESISTANCE 25.9e-3751.24Show/hide
Query:  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEY
        E  WS+G CDCFSD  +CC T WCPC+ FGQ +EI+D GSTSC   G ++ LIA  T C C+Y+  YR ++R +YN++   C DC  H  C  C++ Q+Y
Subjt:  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEY

Query:  RELKNRGFDMHIGWQENVQRR
        RELK+RG+DM +GW  NV+R+
Subjt:  RELKNRGFDMHIGWQENVQRR

AT1G14880.1 PLANT CADMIUM RESISTANCE 11.3e-3146.28Show/hide
Query:  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEY
        +  WS+G CDCFSD  +CC T  CPC+ FGQ +EI+D GS SC   G ++ LI   T C  +Y   Y  ++R +YN++   C DC  H  C  CA+ Q+Y
Subjt:  ESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEY

Query:  RELKNRGFDMHIGWQENVQRR
        RELK+RGFDM +GW  N +++
Subjt:  RELKNRGFDMHIGWQENVQRR

AT1G49030.1 PLAC8 family protein1.6e-2948.78Show/hide
Query:  SPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYR
        S W+SGL DC +D  +   T   P V FGQ +E+IDEG+TSC   G+++ LI       C+YT ++R++LR KY L + P  D   HC+C  CA+CQEYR
Subjt:  SPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYR

Query:  ELKNRGFDMHIGWQENVQRRTKG
        ELKNRG D  IGW  NVQ++  G
Subjt:  ELKNRGFDMHIGWQENVQRRTKG

AT1G68610.1 PLANT CADMIUM RESISTANCE 113.0e-3349.59Show/hide
Query:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPC--ICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYR
        WS+ LC+C+ D+ SCC T WCPCV FG+ +E++D GSTSC  +G ++ +I   T      LY+  YR++LR +YNL+E PC DCCVH  C  CA+CQEYR
Subjt:  WSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPC--ICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAMCQEYR

Query:  ELK-NRGFDMHIGWQENVQRRTK
        +L+ NR  D+ IGW  N++R  +
Subjt:  ELK-NRGFDMHIGWQENVQRRTK

AT5G35525.1 PLAC8 family protein1.9e-3549.6Show/hide
Query:  NSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAM
        N   E  WS+G CDCFSD  +CC T  CPC+ FGQ ++I+D G+TSC   G ++ L+A+ T C CLY+  YR ++R +YN+    C DC  H  C  CA+
Subjt:  NSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAM

Query:  CQEYRELKNRGFDMHIGWQENVQRR
         QEYRELK+RGFDM +GW  NV+++
Subjt:  CQEYRELKNRGFDMHIGWQENVQRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACGACGATATTGGTTTTCTGACCAACTCCGAAAACGAGTCGCCATGGTCTAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGCTGTACAGCATG
GTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTCTTGTTTTGGTAACGGATTAATCTTTTTTCTGATTGCTTCCTGTACGCCATGCA
TTTGCCTTTACACTTATTCTTATCGATCTCGATTGAGGAGAAAATACAACCTCGAAGAAACACCATGCAACGATTGTTGTGTTCATTGTTGGTGTTGGAGTTGTGCTATG
TGTCAAGAGTATCGCGAGCTTAAAAATCGAGGTTTCGACATGCATATCGGTTGGCAAGAAAATGTGCAGAGACGAACCAAGGGAATAGAGATCCCACCTACTGTCCTGGG
ACAAATGAAACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACGACGATATTGGTTTTCTGACCAACTCCGAAAACGAGTCGCCATGGTCTAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGCTGTACAGCATG
GTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTCTTGTTTTGGTAACGGATTAATCTTTTTTCTGATTGCTTCCTGTACGCCATGCA
TTTGCCTTTACACTTATTCTTATCGATCTCGATTGAGGAGAAAATACAACCTCGAAGAAACACCATGCAACGATTGTTGTGTTCATTGTTGGTGTTGGAGTTGTGCTATG
TGTCAAGAGTATCGCGAGCTTAAAAATCGAGGTTTCGACATGCATATCGGTTGGCAAGAAAATGTGCAGAGACGAACCAAGGGAATAGAGATCCCACCTACTGTCCTGGG
ACAAATGAAACGTTGA
Protein sequenceShow/hide protein sequence
MGNDDIGFLTNSENESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFFLIASCTPCICLYTYSYRSRLRRKYNLEETPCNDCCVHCWCWSCAM
CQEYRELKNRGFDMHIGWQENVQRRTKGIEIPPTVLGQMKR