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PI0012981 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0012981
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPolyprotein
Genome locationchr09:8488111..8489427
RNA-Seq ExpressionPI0012981
SyntenyPI0012981
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]5.7e-5474.21Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPSGG+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTR
          +KRF+PRPEIK+YFQK + +YDPIIE EYQSLTL+E VSKIFPK FNFLPE L+K +
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTR

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]6.8e-5575.16Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+P ASP SN +SSTPPTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRK
         P+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSKIFP+ FNFLPE LRK
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.8e-6176.02Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNF
         P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +ETVSKIFP+ FNFL E LRKTRKFYEFIL DT +
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNF

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]5.7e-5476.47Show/hide
Query:  RVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAVAP
        R +STSS+G+R SSS N APSPMSADQYAMDLGFTTVTRS+ARSS I+I SPT+SSTPPR SANL+RPS  + QMRPLASPLSN ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAVAP

Query:  EKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYL
        +KRF+PR EIK+YFQK V +YD IIE EYQSLTL+ETVSKIFP  FNFLP+ L
Subjt:  EKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYL

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]5.0e-5852.61Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG+  SSS N APSPMS DQYAMDLG+TTV +S+++SSGI I SP ESSTPPRPS NL+ P G + QMR  ASP SN ESST PTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNFNTASYPQYKMLVKNLKIKWWDKYNFQHAT
         P+K+F+PR EIK+YFQK + IYDPIIE EYQ                                                                    
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNFNTASYPQYKMLVKNLKIKWWDKYNFQHAT

Query:  IKHMKEWFVENGYLQDLDQKKNAEFLNDKSKLLAALTHATNDADFQRLLSTAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQ
                 +NG LQD+DQ+KNA+FLNDK K LAAL  AT DADFQRLLSTAVN SSSSK A S IQEDEE    EYDL+DPFLDSQ
Subjt:  IKHMKEWFVENGYLQDLDQKKNAEFLNDKSKLLAALTHATNDADFQRLLSTAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQ

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.4e-6176.02Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNF
         P+KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +ETVSKIFP+ FNFL E LRKTRKFYEFIL DT +
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNF

A0A5D3BI61 Uncharacterized protein2.4e-5852.61Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG+  SSS N APSPMS DQYAMDLG+TTV +S+++SSGI I SP ESSTPPRPS NL+ P G + QMR  ASP SN ESST PTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNFNTASYPQYKMLVKNLKIKWWDKYNFQHAT
         P+K+F+PR EIK+YFQK + IYDPIIE EYQ                                                                    
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNFNTASYPQYKMLVKNLKIKWWDKYNFQHAT

Query:  IKHMKEWFVENGYLQDLDQKKNAEFLNDKSKLLAALTHATNDADFQRLLSTAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQ
                 +NG LQD+DQ+KNA+FLNDK K LAAL  AT DADFQRLLSTAVN SSSSK A S IQEDEE    EYDL+DPFLDSQ
Subjt:  IKHMKEWFVENGYLQDLDQKKNAEFLNDKSKLLAALTHATNDADFQRLLSTAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQ

A0A5D3BM67 Uncharacterized protein1.2e-4977.37Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAVAPEKRFMPRPEIKTYFQKQVAIYD
        MSADQYAMDLGFTTVTRS++RSS IRIES TESSTPPRPSANL+RP GG  QMRP ASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK + +YD
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAVAPEKRFMPRPEIKTYFQKQVAIYD

Query:  PIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKF
         IIE EYQS+TL++TVSKIF   FN LPE LRKTR F
Subjt:  PIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKF

A0A5D3E4J4 Uncharacterized protein3.3e-5575.16Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS++R SGI I  PTESSTPPRPSANL+RP G + QM+P ASP SN +SSTPPTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRK
         P+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSKIFP+ FNFLPE LRK
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRK

E5GCE6 Uncharacterized protein2.8e-5474.21Show/hide
Query:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV
        R R +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS++R S I I SPTESSTPPRPS NL+RPSGG+ QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAV

Query:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTR
          +KRF+PRPEIK+YFQK + +YDPIIE EYQSLTL+E VSKIFPK FNFLPE L+K +
Subjt:  APEKRFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTGTGCGAGGCAGAAGAAGAGTAAGCTCTACCTCTTCAAAGGGTAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCATCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCTTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTTGCTCCAGAAAAA
CGGTTCATGCCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATATATGATCCTATCATAGAGCAAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAATCTTCCCTAAGGGCTTTAATTTCCTTCCAGAATACCTCAGAAAAACTAGAAAATTTTACGAGTTTATTCTAGTAGACACAAATTTCAACACAGCATCCTATCCAC
AATACAAAATGCTTGTTAAAAATCTCAAGATTAAATGGTGGGACAAATACAATTTTCAGCATGCCACCATCAAACACATGAAAGAGTGGTTCGTAGAGAACGGCTATCTA
CAAGACCTCGATCAAAAAAAGAACGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCACTGACACATGCAACAAATGATGCTGATTTTCAAAGATTATTATCAAC
GGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCTTCCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGACCTAAACGACCCGTTTCTCGACTCACAAT
CTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTGTGCGAGGCAGAAGAAGAGTAAGCTCTACCTCTTCAAAGGGTAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCATCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCTTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTTGCTCCAGAAAAA
CGGTTCATGCCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATATATGATCCTATCATAGAGCAAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAATCTTCCCTAAGGGCTTTAATTTCCTTCCAGAATACCTCAGAAAAACTAGAAAATTTTACGAGTTTATTCTAGTAGACACAAATTTCAACACAGCATCCTATCCAC
AATACAAAATGCTTGTTAAAAATCTCAAGATTAAATGGTGGGACAAATACAATTTTCAGCATGCCACCATCAAACACATGAAAGAGTGGTTCGTAGAGAACGGCTATCTA
CAAGACCTCGATCAAAAAAAGAACGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCACTGACACATGCAACAAATGATGCTGATTTTCAAAGATTATTATCAAC
GGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCTTCCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGACCTAAACGACCCGTTTCTCGACTCACAAT
CTATGTGA
Protein sequenceShow/hide protein sequence
MSIVRGRRRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPLASPLSNMESSTPPTTYSQAVAPEK
RFMPRPEIKTYFQKQVAIYDPIIEQEYQSLTLDETVSKIFPKGFNFLPEYLRKTRKFYEFILVDTNFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFVENGYL
QDLDQKKNAEFLNDKSKLLAALTHATNDADFQRLLSTAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQSM