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PI0013005 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013005
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr11:23546479..23547056
RNA-Seq ExpressionPI0013005
SyntenyPI0013005
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037251.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.9e-1341.32Show/hide
Query:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN
        ++ T+   + A    +   Y R AQ   R       DPEK + IERLK LGA  F G+ D  +A++      + + KR+EFL+LKQG+ S+ EYE+KY  
Subjt:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN

Query:  LARYALEIIPTEKDKCKRFER
        L+RYA  I+ +E D C+RFER
Subjt:  LARYALEIIPTEKDKCKRFER

KAA0041696.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-1452.69Show/hide
Query:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER
        DPEK +GIERLK LGA  F G+ DP +A       +K F       + KR+EFL LKQG+LS+VEYE+KY  L+RYA  I+  E D+C+RFER
Subjt:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER

KAA0053546.1 uncharacterized protein E6C27_scaffold190G001120 [Cucumis melo var. makuwa]2.8e-1646.3Show/hide
Query:  HFVNSGARRAVEDELYDRVAQRMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKKAFRDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTE
        H VN  A R +++ L+DRVAQRM+D LA + +KKF IERLKAL A  F GT +P + K      + +   +L QGN++I EYEKK+  LA+ A   +  E
Subjt:  HFVNSGARRAVEDELYDRVAQRMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKKAFRDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTE

Query:  KDKCKRFE
         DKC+ F+
Subjt:  KDKCKRFE

TYK06319.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-1452.69Show/hide
Query:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER
        DPEK +GIERLK LGA  F G+ DP +A       +K F       + KR+EFL LKQG+LS+VEYE+KY  L+RYA  I+  E D+C+RFER
Subjt:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER

TYK07530.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.9e-1341.32Show/hide
Query:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN
        ++ T+   + A    +   Y R AQ   R       DPEK + IERLK LGA  F G+ D  +A++      + + KR+EFL+LKQG+ S+ EYE+KY  
Subjt:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN

Query:  LARYALEIIPTEKDKCKRFER
        L+RYA  I+ +E D C+RFER
Subjt:  LARYALEIIPTEKDKCKRFER

TrEMBL top hitse value%identityAlignment
A0A5A7T6M8 DNA/RNA polymerases superfamily protein2.4e-1341.32Show/hide
Query:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN
        ++ T+   + A    +   Y R AQ   R       DPEK + IERLK LGA  F G+ D  +A++      + + KR+EFL+LKQG+ S+ EYE+KY  
Subjt:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN

Query:  LARYALEIIPTEKDKCKRFER
        L+RYA  I+ +E D C+RFER
Subjt:  LARYALEIIPTEKDKCKRFER

A0A5A7TI15 Reverse transcriptase5.6e-1552.69Show/hide
Query:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER
        DPEK +GIERLK LGA  F G+ DP +A       +K F       + KR+EFL LKQG+LS+VEYE+KY  L+RYA  I+  E D+C+RFER
Subjt:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER

A0A5D3C7J1 Reverse transcriptase5.6e-1552.69Show/hide
Query:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER
        DPEK +GIERLK LGA  F G+ DP +A       +K F       + KR+EFL LKQG+LS+VEYE+KY  L+RYA  I+  E D+C+RFER
Subjt:  DPEKKFGIERLKALGAQEFSGTVDPKEA-------KKAF------RDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKCKRFER

A0A5D3C867 DNA/RNA polymerases superfamily protein2.4e-1341.32Show/hide
Query:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN
        ++ T+   + A    +   Y R AQ   R       DPEK + IERLK LGA  F G+ D  +A++      + + KR+EFL+LKQG+ S+ EYE+KY  
Subjt:  NSATHFVNSGARRAVEDELYDRVAQ---RMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKK-----AFRDEKREEFLKLKQGNLSIVEYEKKYAN

Query:  LARYALEIIPTEKDKCKRFER
        L+RYA  I+ +E D C+RFER
Subjt:  LARYALEIIPTEKDKCKRFER

A0A5D3D6F8 Retrotrans_gag domain-containing protein1.3e-1646.3Show/hide
Query:  HFVNSGARRAVEDELYDRVAQRMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKKAFRDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTE
        H VN  A R +++ L+DRVAQRM+D LA + +KKF IERLKAL A  F GT +P + K      + +   +L QGN++I EYEKK+  LA+ A   +  E
Subjt:  HFVNSGARRAVEDELYDRVAQRMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKKAFRDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTE

Query:  KDKCKRFE
         DKC+ F+
Subjt:  KDKCKRFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATTCGGCAACGCATTTCGTTAATTCTGGAGCAAGGCGAGCTGTGGAAGACGAATTGTATGATAGAGTAGCTCAGCGGATGATTGATGGTTTGGCGAGAGATCC
TGAGAAAAAGTTTGGAATAGAGCGTCTGAAGGCATTAGGAGCGCAAGAGTTTTCTGGAACAGTAGACCCTAAGGAAGCGAAGAAGGCTTTTAGAGATGAAAAGCGGGAGG
AATTTTTGAAGTTAAAACAAGGAAATTTATCTATTGTGGAATATGAGAAGAAGTATGCTAATTTGGCAAGGTATGCGTTGGAGATTATTCCGACAGAAAAGGATAAGTGC
AAGCGTTTTGAGAGGTTTGAATTTTCGGATTCGGACACCAGTTATTGCATGTGCTGCGTGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATTCGGCAACGCATTTCGTTAATTCTGGAGCAAGGCGAGCTGTGGAAGACGAATTGTATGATAGAGTAGCTCAGCGGATGATTGATGGTTTGGCGAGAGATCC
TGAGAAAAAGTTTGGAATAGAGCGTCTGAAGGCATTAGGAGCGCAAGAGTTTTCTGGAACAGTAGACCCTAAGGAAGCGAAGAAGGCTTTTAGAGATGAAAAGCGGGAGG
AATTTTTGAAGTTAAAACAAGGAAATTTATCTATTGTGGAATATGAGAAGAAGTATGCTAATTTGGCAAGGTATGCGTTGGAGATTATTCCGACAGAAAAGGATAAGTGC
AAGCGTTTTGAGAGGTTTGAATTTTCGGATTCGGACACCAGTTATTGCATGTGCTGCGTGGAGTAA
Protein sequenceShow/hide protein sequence
MDNSATHFVNSGARRAVEDELYDRVAQRMIDGLARDPEKKFGIERLKALGAQEFSGTVDPKEAKKAFRDEKREEFLKLKQGNLSIVEYEKKYANLARYALEIIPTEKDKC
KRFERFEFSDSDTSYCMCCVE